RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 PARP2Q9UGN5 583 aa25.67■■□□□ 1.7
U2AF1-202ENST00000380276 GIT1Q9Y2X7 761 aa25.67■■□□□ 1.7
U2AF1-202ENST00000380276 NARSO43776 548 aaKnown RBP25.66■■□□□ 1.7
U2AF1-202ENST00000380276 DGAT1O75907 488 aa25.66■■□□□ 1.7
U2AF1-202ENST00000380276 CFHP08603 1231 aa25.66■■□□□ 1.7
U2AF1-202ENST00000380276 ARF4P18085 180 aaPredicted RBP25.66■■□□□ 1.7
U2AF1-202ENST00000380276 DSC1Q08554 894 aa25.66■■□□□ 1.7
U2AF1-202ENST00000380276 MAEAQ7L5Y9 396 aa25.66■■□□□ 1.7
U2AF1-202ENST00000380276 FRMD5Q7Z6J6 570 aa25.66■■□□□ 1.7
U2AF1-202ENST00000380276 RSAD2Q8WXG1 361 aa25.66■■□□□ 1.7
U2AF1-202ENST00000380276 RABGGTAQ92696 567 aa25.66■■□□□ 1.7
U2AF1-202ENST00000380276 POLR3FQ9H1D9 316 aaPredicted RBP25.66■■□□□ 1.7
U2AF1-202ENST00000380276 KLK14Q9P0G3 267 aa25.66■■□□□ 1.7
U2AF1-202ENST00000380276 PROB1E7EW31 1015 aa25.65■■□□□ 1.7
U2AF1-202ENST00000380276 B4GALT5O43286 388 aa25.65■■□□□ 1.7
U2AF1-202ENST00000380276 PI15O43692 258 aa25.65■■□□□ 1.7
U2AF1-202ENST00000380276 USO1O60763 962 aaKnown RBP25.65■■□□□ 1.7
U2AF1-202ENST00000380276 CTDNEP1O95476 244 aa25.65■■□□□ 1.7
U2AF1-202ENST00000380276 AOC1P19801 751 aa25.65■■□□□ 1.7
U2AF1-202ENST00000380276 NBL1P41271 181 aa25.65■■□□□ 1.7
U2AF1-202ENST00000380276 TXKP42681 527 aa25.65■■□□□ 1.7
U2AF1-202ENST00000380276 DSG1Q02413 1049 aa25.65■■□□□ 1.7
U2AF1-202ENST00000380276 KIAA0319Q5VV43 1072 aa25.65■■□□□ 1.7
U2AF1-202ENST00000380276 FUT10Q6P4F1 479 aa25.65■■□□□ 1.7
U2AF1-202ENST00000380276 PIGOQ8TEQ8 1089 aa25.65■■□□□ 1.7
U2AF1-202ENST00000380276 TTC12Q9H892 705 aaPredicted RBP25.65■■□□□ 1.7
U2AF1-202ENST00000380276 RXFP1Q9HBX9 757 aa25.65■■□□□ 1.7
U2AF1-202ENST00000380276 WDR6Q9NNW5 1121 aaKnown RBP25.65■■□□□ 1.7
U2AF1-202ENST00000380276 ANKEF1Q9NU02 776 aa25.65■■□□□ 1.7
U2AF1-202ENST00000380276 USP34Q70CQ2 3546 aa25.65■■□□□ 1.7
U2AF1-202ENST00000380276 A0A087WWV3 80 aa25.64■■□□□ 1.7
U2AF1-202ENST00000380276 PRR23AA6NEV1 266 aa25.64■■□□□ 1.7
U2AF1-202ENST00000380276 LRRIQ4A6NIV6 560 aa25.64■■□□□ 1.7
U2AF1-202ENST00000380276 N4BP1O75113 896 aaKnown RBP25.64■■□□□ 1.7
U2AF1-202ENST00000380276 GLRA2P23416 452 aa25.64■■□□□ 1.7
U2AF1-202ENST00000380276 ANKRD1Q15327 319 aa25.64■■□□□ 1.7
U2AF1-202ENST00000380276 TMEM132AQ24JP5 1023 aa25.64■■□□□ 1.7
U2AF1-202ENST00000380276 NECAB1Q8N987 351 aa25.64■■□□□ 1.7
U2AF1-202ENST00000380276 RIN2Q8WYP3 895 aaPredicted RBP25.64■■□□□ 1.7
U2AF1-202ENST00000380276 NEMFO60524 1076 aa25.63■■□□□ 1.69
U2AF1-202ENST00000380276 NPR3P17342 541 aa25.63■■□□□ 1.69
U2AF1-202ENST00000380276 ARL2P36404 184 aa25.63■■□□□ 1.69
U2AF1-202ENST00000380276 AMHR2Q16671 573 aa25.63■■□□□ 1.69
U2AF1-202ENST00000380276 USP41Q3LFD5 358 aa25.63■■□□□ 1.69
U2AF1-202ENST00000380276 SLC27A1Q6PCB7 646 aa25.63■■□□□ 1.69
U2AF1-202ENST00000380276 CYP26C1Q6V0L0 522 aa25.63■■□□□ 1.69
U2AF1-202ENST00000380276 GET4Q7L5D6 327 aaPredicted RBP25.63■■□□□ 1.69
U2AF1-202ENST00000380276 IFNLR1Q8IU57 520 aaPredicted RBP25.63■■□□□ 1.69
U2AF1-202ENST00000380276 RNF168Q8IYW5 571 aaPredicted RBP25.63■■□□□ 1.69
U2AF1-202ENST00000380276 NKD2Q969F2 451 aaPredicted RBP25.63■■□□□ 1.69
U2AF1-202ENST00000380276 RTP3Q9BQQ7 232 aa25.63■■□□□ 1.69
U2AF1-202ENST00000380276 GPR62Q9BZJ7 368 aa25.63■■□□□ 1.69
U2AF1-202ENST00000380276 CA14Q9ULX7 337 aa25.63■■□□□ 1.69
U2AF1-202ENST00000380276 TADA2AO75478 443 aa25.62■■□□□ 1.69
U2AF1-202ENST00000380276 LYPLA2O95372 231 aa25.62■■□□□ 1.69
U2AF1-202ENST00000380276 RPL17P18621 184 aaKnown RBP25.62■■□□□ 1.69
U2AF1-202ENST00000380276 RARRES1P49788 294 aa25.62■■□□□ 1.69
U2AF1-202ENST00000380276 POU5F1BQ06416 359 aa25.62■■□□□ 1.69
U2AF1-202ENST00000380276 GRIK3Q13003 919 aa25.62■■□□□ 1.69
U2AF1-202ENST00000380276 TRIM29Q14134 588 aa25.62■■□□□ 1.69
U2AF1-202ENST00000380276 SNX27Q96L92 541 aa25.62■■□□□ 1.69
U2AF1-202ENST00000380276 MYADMQ96S97 322 aa25.62■■□□□ 1.69
U2AF1-202ENST00000380276 HSD17B14Q9BPX1 270 aa25.62■■□□□ 1.69
U2AF1-202ENST00000380276 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.62■■□□□ 1.69
U2AF1-202ENST00000380276 ADAM28Q9UKQ2 775 aa25.62■■□□□ 1.69
U2AF1-202ENST00000380276 TGM5O43548 720 aa25.61■■□□□ 1.69
U2AF1-202ENST00000380276 CCDC105Q8IYK2 499 aa25.61■■□□□ 1.69
U2AF1-202ENST00000380276 HASPINQ8TF76 798 aa25.61■■□□□ 1.69
U2AF1-202ENST00000380276 TNFRSF25Q93038 417 aa25.61■■□□□ 1.69
U2AF1-202ENST00000380276 PLEKHA4Q9H4M7 779 aa25.61■■□□□ 1.69
U2AF1-202ENST00000380276 GPRC5CQ9NQ84 441 aa25.61■■□□□ 1.69
U2AF1-202ENST00000380276 CACNG4Q9UBN1 327 aa25.61■■□□□ 1.69
U2AF1-202ENST00000380276 BTBD18B2RXH4 712 aa25.6■■□□□ 1.69
U2AF1-202ENST00000380276 FDPSP14324 419 aaKnown RBP25.6■■□□□ 1.69
U2AF1-202ENST00000380276 LIG1P18858 919 aa25.6■■□□□ 1.69
U2AF1-202ENST00000380276 ATP2B1P20020 1258 aa25.6■■□□□ 1.69
U2AF1-202ENST00000380276 ANGPT1Q15389 498 aa25.6■■□□□ 1.69
U2AF1-202ENST00000380276 DIS3L2Q8IYB7 885 aaKnown RBP25.6■■□□□ 1.69
U2AF1-202ENST00000380276 DTWD2Q8NBA8 298 aa25.6■■□□□ 1.69
U2AF1-202ENST00000380276 HDAC7Q8WUI4 952 aa25.6■■□□□ 1.69
U2AF1-202ENST00000380276 ZNF707Q96C28 371 aaPredicted RBP25.6■■□□□ 1.69
U2AF1-202ENST00000380276 CHST7Q9NS84 486 aa25.6■■□□□ 1.69
U2AF1-202ENST00000380276 POTEMA6NI47 508 aa25.59■■□□□ 1.69
U2AF1-202ENST00000380276 EFEMP2O95967 443 aa25.59■■□□□ 1.69
U2AF1-202ENST00000380276 CREMQ03060 361 aa25.59■■□□□ 1.69
U2AF1-202ENST00000380276 PRSS55Q6UWB4 352 aaPredicted RBP25.59■■□□□ 1.69
U2AF1-202ENST00000380276 CEP57Q86XR8 500 aa25.59■■□□□ 1.69
U2AF1-202ENST00000380276 ZBTB8OSQ8IWT0 167 aa25.59■■□□□ 1.69
U2AF1-202ENST00000380276 ST13P5Q8NFI4 369 aaPredicted RBP25.59■■□□□ 1.69
U2AF1-202ENST00000380276 NFKBIZQ9BYH8 718 aa25.59■■□□□ 1.69
U2AF1-202ENST00000380276 NT5C3AQ9H0P0 336 aa25.59■■□□□ 1.69
U2AF1-202ENST00000380276 ZDHHC7Q9NXF8 308 aa25.59■■□□□ 1.69
U2AF1-202ENST00000380276 EPS15L1Q9UBC2 864 aa25.59■■□□□ 1.69
U2AF1-202ENST00000380276 SF3B1O75533 1304 aaKnown RBP eCLIP25.59■■□□□ 1.696e-6■■■■■ 103.4
U2AF1-202ENST00000380276 CACNA1HO95180 2353 aa25.58■■□□□ 1.69
U2AF1-202ENST00000380276 CASTOR2A6NHX0 329 aa25.58■■□□□ 1.69
U2AF1-202ENST00000380276 LARGE1O95461 756 aa25.58■■□□□ 1.69
U2AF1-202ENST00000380276 HSP90AA2PQ14568 343 aaPredicted RBP25.58■■□□□ 1.69
U2AF1-202ENST00000380276 SLC44A3Q8N4M1 653 aa25.58■■□□□ 1.69
U2AF1-202ENST00000380276 GSTCDQ8NEC7 633 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms