RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 WHAMMP3Q1A5X7 153 aa21.49■■□□□ 1.03
PDLIM5-205ENST00000380180 CRELD2Q6UXH1 353 aaPredicted RBP21.49■■□□□ 1.03
PDLIM5-205ENST00000380180 RSRC2Q7L4I2 434 aaKnown RBP21.49■■□□□ 1.03
PDLIM5-205ENST00000380180 RASAL3Q86YV0 1011 aa21.49■■□□□ 1.03
PDLIM5-205ENST00000380180 RNF149Q8NC42 400 aa21.49■■□□□ 1.03
PDLIM5-205ENST00000380180 FBXL13Q8NEE6 735 aa21.49■■□□□ 1.03
PDLIM5-205ENST00000380180 AFG1LQ8WV93 481 aa21.49■■□□□ 1.03
PDLIM5-205ENST00000380180 EMID1Q96A84 441 aaPredicted RBP21.49■■□□□ 1.03
PDLIM5-205ENST00000380180 ZBTB10Q96DT7 871 aa21.49■■□□□ 1.03
PDLIM5-205ENST00000380180 NOX5Q96PH1 765 aa21.49■■□□□ 1.03
PDLIM5-205ENST00000380180 JPH2Q9BR39 696 aaPredicted RBP21.49■■□□□ 1.03
PDLIM5-205ENST00000380180 TINF2Q9BSI4 451 aa21.49■■□□□ 1.03
PDLIM5-205ENST00000380180 ANKFY1Q9P2R3 1169 aa21.49■■□□□ 1.03
PDLIM5-205ENST00000380180 SUCLA2Q9P2R7 463 aaPredicted RBP21.49■■□□□ 1.03
PDLIM5-205ENST00000380180 A0A0B4J269 797 aa21.48■■□□□ 1.03
PDLIM5-205ENST00000380180 TTLL13PA6NNM8 815 aa21.48■■□□□ 1.03
PDLIM5-205ENST00000380180 IGF2BP3O00425 579 aaKnown RBP eCLIP21.48■■□□□ 1.03
PDLIM5-205ENST00000380180 MSCO60682 206 aa21.48■■□□□ 1.03
PDLIM5-205ENST00000380180 ECM2O94769 699 aaPredicted RBP21.48■■□□□ 1.03
PDLIM5-205ENST00000380180 MATR3P43243 847 aaKnown RBP eCLIP21.48■■□□□ 1.032e-6■■■■□ 23.9
PDLIM5-205ENST00000380180 NAP1L1P55209 391 aaKnown RBP21.48■■□□□ 1.03
PDLIM5-205ENST00000380180 CDCA2Q69YH5 1023 aaPredicted RBP21.48■■□□□ 1.03
PDLIM5-205ENST00000380180 EFCAB12Q6NXP0 572 aa21.48■■□□□ 1.03
PDLIM5-205ENST00000380180 RHPN2Q8IUC4 686 aa21.48■■□□□ 1.03
PDLIM5-205ENST00000380180 SLC30A5Q8TAD4 765 aa21.48■■□□□ 1.03
PDLIM5-205ENST00000380180 OLIG1Q8TAK6 271 aa21.48■■□□□ 1.03
PDLIM5-205ENST00000380180 TAS1R2Q8TE23 839 aa21.48■■□□□ 1.03
PDLIM5-205ENST00000380180 ZNF516Q92618 1163 aa21.48■■□□□ 1.03
PDLIM5-205ENST00000380180 KAT5Q92993 513 aa21.48■■□□□ 1.03
PDLIM5-205ENST00000380180 VTI1AQ96AJ9 217 aa21.48■■□□□ 1.03
PDLIM5-205ENST00000380180 ALS2CR12Q96Q35 445 aa21.48■■□□□ 1.03
PDLIM5-205ENST00000380180 MSTO1Q9BUK6 570 aa21.48■■□□□ 1.03
PDLIM5-205ENST00000380180 CCDC113Q9H0I3 377 aa21.48■■□□□ 1.03
PDLIM5-205ENST00000380180 SLC15A5A6NIM6 579 aa21.48■■□□□ 1.03
PDLIM5-205ENST00000380180 SRGAP2O75044 1071 aa21.48■■□□□ 1.03
PDLIM5-205ENST00000380180 LDHAP00338 332 aaKnown RBP21.48■■□□□ 1.03
PDLIM5-205ENST00000380180 GPC3P51654 580 aa21.48■■□□□ 1.03
PDLIM5-205ENST00000380180 WNT7BP56706 349 aa21.48■■□□□ 1.03
PDLIM5-205ENST00000380180 KIF22Q14807 665 aa21.48■■□□□ 1.03
PDLIM5-205ENST00000380180 PSMD6Q15008 389 aa21.48■■□□□ 1.03
PDLIM5-205ENST00000380180 DNAAF5Q86Y56 855 aa21.48■■□□□ 1.03
PDLIM5-205ENST00000380180 SYT11Q9BT88 431 aa21.48■■□□□ 1.03
PDLIM5-205ENST00000380180 RAB20Q9NX57 234 aa21.48■■□□□ 1.03
PDLIM5-205ENST00000380180 ZNF236Q9UL36 1845 aa21.47■■□□□ 1.03
PDLIM5-205ENST00000380180 ADGRA2Q96PE1 1338 aa21.47■■□□□ 1.03
PDLIM5-205ENST00000380180 GJB1P08034 283 aa21.47■■□□□ 1.03
PDLIM5-205ENST00000380180 INSRRP14616 1297 aa21.47■■□□□ 1.03
PDLIM5-205ENST00000380180 CHMP4BP1P59074 171 aa21.47■■□□□ 1.03
PDLIM5-205ENST00000380180 CLDN10P78369 228 aa21.47■■□□□ 1.03
PDLIM5-205ENST00000380180 ZBTB41Q5SVQ8 909 aa21.47■■□□□ 1.03
PDLIM5-205ENST00000380180 ZPBP2Q6X784 338 aa21.47■■□□□ 1.03
PDLIM5-205ENST00000380180 PPM1KQ8N3J5 372 aa21.47■■□□□ 1.03
PDLIM5-205ENST00000380180 METTL13Q8N6R0 699 aa21.47■■□□□ 1.03
PDLIM5-205ENST00000380180 LNX1Q8TBB1 728 aaPredicted RBP21.47■■□□□ 1.03
PDLIM5-205ENST00000380180 ABHD16BQ9H3Z7 469 aa21.47■■□□□ 1.03
PDLIM5-205ENST00000380180 SMPD1P17405 629 aa21.46■■□□□ 1.03
PDLIM5-205ENST00000380180 IGBP1P78318 339 aa21.46■■□□□ 1.03
PDLIM5-205ENST00000380180 ACVR2BQ13705 512 aa21.46■■□□□ 1.03
PDLIM5-205ENST00000380180 C15orf39Q6ZRI6 1047 aa21.46■■□□□ 1.03
PDLIM5-205ENST00000380180 GLYCTKQ8IVS8 523 aa21.46■■□□□ 1.03
PDLIM5-205ENST00000380180 ZBTB8OSQ8IWT0 167 aa21.46■■□□□ 1.03
PDLIM5-205ENST00000380180 U2AF1L4Q8WU68 220 aaKnown RBP21.46■■□□□ 1.03
PDLIM5-205ENST00000380180 FAM84AQ96KN4 292 aa21.46■■□□□ 1.03
PDLIM5-205ENST00000380180 KREMEN1Q96MU8 473 aa21.46■■□□□ 1.03
PDLIM5-205ENST00000380180 FNBP1Q96RU3 617 aa21.46■■□□□ 1.03
PDLIM5-205ENST00000380180 PDE11AQ9HCR9 933 aa21.46■■□□□ 1.03
PDLIM5-205ENST00000380180 PPFIA4O75335 1185 aa21.46■■□□□ 1.03
PDLIM5-205ENST00000380180 TNNI1P19237 187 aa21.46■■□□□ 1.03
PDLIM5-205ENST00000380180 CLCN3P51790 818 aa21.46■■□□□ 1.03
PDLIM5-205ENST00000380180 DUSP28Q4G0W2 176 aa21.46■■□□□ 1.03
PDLIM5-205ENST00000380180 ZNF484Q5JVG2 852 aa21.46■■□□□ 1.03
PDLIM5-205ENST00000380180 TEX35Q5T0J7 233 aa21.46■■□□□ 1.03
PDLIM5-205ENST00000380180 LMBRD2Q68DH5 695 aaPredicted RBP21.46■■□□□ 1.03
PDLIM5-205ENST00000380180 PDCL2Q8N4E4 241 aa21.46■■□□□ 1.03
PDLIM5-205ENST00000380180 GOLGA1Q92805 767 aa21.46■■□□□ 1.03
PDLIM5-205ENST00000380180 ZNF668Q96K58 619 aaPredicted RBP21.46■■□□□ 1.03
PDLIM5-205ENST00000380180 C16orf70Q9BSU1 422 aa21.46■■□□□ 1.03
PDLIM5-205ENST00000380180 MRPL4Q9BYD3 311 aaKnown RBP21.46■■□□□ 1.03
PDLIM5-205ENST00000380180 RBAKQ9NYW8 714 aaPredicted RBP21.46■■□□□ 1.03
PDLIM5-205ENST00000380180 MANSC4A6NHS7 340 aaPredicted RBP21.45■■□□□ 1.02
PDLIM5-205ENST00000380180 BTNL10A8MVZ5 291 aa21.45■■□□□ 1.02
PDLIM5-205ENST00000380180 CLDN3O15551 220 aa21.45■■□□□ 1.02
PDLIM5-205ENST00000380180 C22orf31O95567 290 aa21.45■■□□□ 1.02
PDLIM5-205ENST00000380180 ZNF286BP0CG31 522 aa21.45■■□□□ 1.02
PDLIM5-205ENST00000380180 PRPF4BQ13523 1007 aaKnown RBP21.45■■□□□ 1.02
PDLIM5-205ENST00000380180 MAPK6Q16659 721 aa21.45■■□□□ 1.02
PDLIM5-205ENST00000380180 HELQQ8TDG4 1101 aa21.45■■□□□ 1.02
PDLIM5-205ENST00000380180 NLRP4Q96MN2 994 aa21.45■■□□□ 1.02
PDLIM5-205ENST00000380180 NT5C1BQ96P26 610 aa21.45■■□□□ 1.02
PDLIM5-205ENST00000380180 C2orf40Q9H1Z8 148 aa21.45■■□□□ 1.02
PDLIM5-205ENST00000380180 SLC5A4Q9NY91 659 aa21.45■■□□□ 1.02
PDLIM5-205ENST00000380180 ZHX1Q9UKY1 873 aaPredicted RBP21.45■■□□□ 1.02
PDLIM5-205ENST00000380180 MGAMO43451 1857 aa21.45■■□□□ 1.02
PDLIM5-205ENST00000380180 PRKCBP05771 671 aa21.45■■□□□ 1.02
PDLIM5-205ENST00000380180 TNFAIP3P21580 790 aa21.45■■□□□ 1.02
PDLIM5-205ENST00000380180 MFAP3P55082 362 aa21.45■■□□□ 1.02
PDLIM5-205ENST00000380180 TAF1CQ15572 869 aaPredicted RBP21.45■■□□□ 1.02
PDLIM5-205ENST00000380180 SEZ6Q53EL9 994 aa21.45■■□□□ 1.02
PDLIM5-205ENST00000380180 ELMO3Q96BJ8 720 aa21.45■■□□□ 1.02
PDLIM5-205ENST00000380180 ACO2Q99798 780 aaKnown RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms