RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 H7C1D1 291 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 WNT7AO00755 349 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 LCA5LO95447 670 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 TARSP26639 723 aaKnown RBP7.99□□□□□ -1.13
CDKL5-201ENST00000379989 IFI35P80217 286 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-201ENST00000379989 CNGA2Q16280 664 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 VWA3BQ502W6 1294 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 HS2ST1Q7LGA3 356 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 ECHDC2Q86YB7 292 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 ZBED8Q8IZ13 594 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 LCORLQ8N3X6 602 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 MB21D1Q8N884 522 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 INPP5DQ92835 1189 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 SLC7A6OSQ96CW6 309 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-201ENST00000379989 CCDC85AQ96PX6 553 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-201ENST00000379989 EYA3Q99504 573 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 LBHD1Q9BQE6 289 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-201ENST00000379989 STK33Q9BYT3 514 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 IFIH1Q9BYX4 1025 aaKnown RBP7.99□□□□□ -1.13
CDKL5-201ENST00000379989 ARMT1Q9H993 441 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 TRPC7Q9HCX4 862 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 EXOC1Q9NV70 894 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 SEC63Q9UGP8 760 aaKnown RBP7.99□□□□□ -1.13
CDKL5-201ENST00000379989 GGA1Q9UJY5 639 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 COL1A1P02452 1464 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-201ENST00000379989 SLC26A4O43511 780 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 TBX10O75333 385 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 KRT36O76013 467 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 PLEKP08567 350 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-201ENST00000379989 VPS41P49754 854 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 RNASE9P60153 205 aaKnown RBP7.99□□□□□ -1.13
CDKL5-201ENST00000379989 SPAG1Q07617 926 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 SHROOM1Q2M3G4 852 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-201ENST00000379989 CGB2Q6NT52 195 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 RFWD3Q6PCD5 774 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 RSPH3Q86UC2 560 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 ST13P4Q8IZP2 240 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-201ENST00000379989 CRACR2BQ8N4Y2 399 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-201ENST00000379989 FANCBQ8NB91 859 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 RIN3Q8TB24 985 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 CELF1Q92879 486 aaKnown RBP7.99□□□□□ -1.13
CDKL5-201ENST00000379989 AIFM3Q96NN9 605 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 HEPHQ9BQS7 1158 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 TTYH3Q9C0H2 523 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 NDEL1Q9GZM8 345 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 MYLK2Q9H1R3 596 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 TIMMDC1Q9NPL8 285 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 DKK3Q9UBP4 350 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 SAP30BPQ9UHR5 308 aaKnown RBP7.99□□□□□ -1.13
CDKL5-201ENST00000379989 PCDHA13Q9Y5I0 950 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 SMIM31A0A1B0GVY4 71 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 TESPA1A2RU30 521 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-201ENST00000379989 GRID2IPA4D2P6 1211 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 E9PBE3 544 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 CAPN9O14815 690 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 MMP1P03956 469 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 NPR1P16066 1061 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 DNA2P51530 1060 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 EIF3BP55884 814 aaKnown RBP7.99□□□□□ -1.13
CDKL5-201ENST00000379989 IGBP1P78318 339 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 PFKPQ01813 784 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 SLC34A1Q06495 639 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 MSLNQ13421 630 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-201ENST00000379989 SPA17Q15506 151 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 DEPDC1Q5TB30 811 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 RNF43Q68DV7 783 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 CAPN12Q6ZSI9 719 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 CYB5R4Q7L1T6 521 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 ZNF654Q8IZM8 581 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 BBS5Q8N3I7 341 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 CEP70Q8NHQ1 597 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 HPS3Q969F9 1004 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 MTMR8Q96EF0 704 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 PGM2Q96G03 612 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 INPP4AQ96PE3 977 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-201ENST00000379989 QTRT2Q9H974 415 aaKnown RBP7.99□□□□□ -1.13
CDKL5-201ENST00000379989 USP29Q9HBJ7 922 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 RPL26L1Q9UNX3 145 aaKnown RBP7.99□□□□□ -1.13
CDKL5-201ENST00000379989 GAKO14976 1311 aa7.99□□□□□ -1.13
CDKL5-201ENST00000379989 A0A0G2JLW4 131 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 B4E1Z4 1266 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 VILLO15195 856 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 MAP3K7O43318 606 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 KDM1AO60341 852 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 RNASEH1O60930 286 aaKnown RBP7.98□□□□□ -1.13
CDKL5-201ENST00000379989 DGKIO75912 1065 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 GYS1P13807 737 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 ADRM1Q16186 407 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 PRR5LQ6MZQ0 368 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 B3GNT6Q6ZMB0 384 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 C4orf50Q6ZRC1 276 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 CABP7Q86V35 215 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 FAM186BQ8IYM0 893 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 NUP93Q8N1F7 819 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 PPFIBP2Q8ND30 876 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 CCDC127Q96BQ5 260 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 PHF12Q96QT6 1004 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 SLC39A3Q9BRY0 314 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 KIAA1683Q9H0B3 1180 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 EPB41L1Q9H4G0 881 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms