RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 APEX2Q9UBZ4 518 aa21.04■□□□□ 0.96
SSU72-204ENST00000378726 ADAMTS1Q9UHI8 967 aa21.04■□□□□ 0.96
SSU72-204ENST00000378726 MANSC4A6NHS7 340 aaPredicted RBP21.03■□□□□ 0.96
SSU72-204ENST00000378726 ADCY3O60266 1144 aa21.03■□□□□ 0.96
SSU72-204ENST00000378726 HBP1O60381 514 aa21.03■□□□□ 0.96
SSU72-204ENST00000378726 MKRN4PQ13434 485 aaPredicted RBP21.03■□□□□ 0.96
SSU72-204ENST00000378726 PHLDB3Q6NSJ2 640 aa21.03■□□□□ 0.96
SSU72-204ENST00000378726 LRRC71Q8N4P6 559 aa21.03■□□□□ 0.96
SSU72-204ENST00000378726 TCP11Q8WWU5 503 aa21.03■□□□□ 0.96
SSU72-204ENST00000378726 CCDC102AQ96A19 550 aa21.03■□□□□ 0.96
SSU72-204ENST00000378726 POP1Q99575 1024 aaKnown RBP21.03■□□□□ 0.96
SSU72-204ENST00000378726 FAM213AQ9BRX8 229 aa21.03■□□□□ 0.96
SSU72-204ENST00000378726 TINF2Q9BSI4 451 aa21.03■□□□□ 0.96
SSU72-204ENST00000378726 TSGA10Q9BZW7 698 aa21.03■□□□□ 0.96
SSU72-204ENST00000378726 TMEM117Q9H0C3 514 aa21.03■□□□□ 0.96
SSU72-204ENST00000378726 RNPEPQ9H4A4 650 aa21.03■□□□□ 0.96
SSU72-204ENST00000378726 IGKV6-21A0A0C4DH24 114 aa21.02■□□□□ 0.96
SSU72-204ENST00000378726 RBAK-RBAKDNI3L0D1 243 aa21.02■□□□□ 0.96
SSU72-204ENST00000378726 TUBBP07437 444 aa21.02■□□□□ 0.96
SSU72-204ENST00000378726 STAT1P42224 750 aa21.02■□□□□ 0.96
SSU72-204ENST00000378726 PTK2Q05397 1052 aa21.02■□□□□ 0.96
SSU72-204ENST00000378726 SLC18A3Q16572 532 aa21.02■□□□□ 0.96
SSU72-204ENST00000378726 SAPCD2Q86UD0 394 aa21.02■□□□□ 0.96
SSU72-204ENST00000378726 NPLOC4Q8TAT6 608 aa21.02■□□□□ 0.96
SSU72-204ENST00000378726 TRAPPC12Q8WVT3 735 aa21.02■□□□□ 0.96
SSU72-204ENST00000378726 ERAP1Q9NZ08 941 aa21.02■□□□□ 0.96
SSU72-204ENST00000378726 PLXNB2O15031 1838 aa21.02■□□□□ 0.96
SSU72-204ENST00000378726 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.02■□□□□ 0.96
SSU72-204ENST00000378726 SLC15A5A6NIM6 579 aa21.02■□□□□ 0.96
SSU72-204ENST00000378726 GAS2O43903 313 aaKnown RBP21.02■□□□□ 0.96
SSU72-204ENST00000378726 PHACTR2O75167 634 aa21.02■□□□□ 0.96
SSU72-204ENST00000378726 PRKCIP41743 596 aa21.02■□□□□ 0.96
SSU72-204ENST00000378726 DRAP1Q14919 205 aaPredicted RBP21.02■□□□□ 0.96
SSU72-204ENST00000378726 ZNF571Q7Z3V5 609 aaPredicted RBP21.02■□□□□ 0.96
SSU72-204ENST00000378726 TMC2Q8TDI7 906 aa21.02■□□□□ 0.96
SSU72-204ENST00000378726 AFG1LQ8WV93 481 aa21.02■□□□□ 0.96
SSU72-204ENST00000378726 STYXL1Q9Y6J8 313 aa21.02■□□□□ 0.96
SSU72-204ENST00000378726 A0A087X0T9 212 aa21.01■□□□□ 0.95
SSU72-204ENST00000378726 ZNF233A6NK53 670 aa21.01■□□□□ 0.95
SSU72-204ENST00000378726 PMM2O15305 246 aa21.01■□□□□ 0.95
SSU72-204ENST00000378726 LRRN2O75325 713 aa21.01■□□□□ 0.95
SSU72-204ENST00000378726 FAM228BP0C875 321 aa21.01■□□□□ 0.95
SSU72-204ENST00000378726 SRGAP2CP0DJJ0 459 aa21.01■□□□□ 0.95
SSU72-204ENST00000378726 MXI1P50539 228 aa21.01■□□□□ 0.95
SSU72-204ENST00000378726 CYP24A1Q07973 514 aa21.01■□□□□ 0.95
SSU72-204ENST00000378726 LAMTOR4Q0VGL1 99 aa21.01■□□□□ 0.95
SSU72-204ENST00000378726 MXD4Q14582 209 aaPredicted RBP21.01■□□□□ 0.95
SSU72-204ENST00000378726 EPC2Q52LR7 807 aa21.01■□□□□ 0.95
SSU72-204ENST00000378726 RGMBQ6NW40 437 aa21.01■□□□□ 0.95
SSU72-204ENST00000378726 PSPC1Q8WXF1 523 aaKnown RBP21.01■□□□□ 0.95
SSU72-204ENST00000378726 ZBTB45Q96K62 511 aaPredicted RBP21.01■□□□□ 0.95
SSU72-204ENST00000378726 JPH2Q9BR39 696 aaPredicted RBP21.01■□□□□ 0.95
SSU72-204ENST00000378726 TARS2Q9BW92 718 aaKnown RBP21.01■□□□□ 0.95
SSU72-204ENST00000378726 FEZ2Q9UHY8 353 aaPredicted RBP21.01■□□□□ 0.95
SSU72-204ENST00000378726 LCMT1Q9UIC8 334 aa21.01■□□□□ 0.95
SSU72-204ENST00000378726 SAR1BQ9Y6B6 198 aa21.01■□□□□ 0.95
SSU72-204ENST00000378726 MACROD2A1Z1Q3 448 aa21.01■□□□□ 0.95
SSU72-204ENST00000378726 EXTL3O43909 919 aa21.01■□□□□ 0.95
SSU72-204ENST00000378726 PIGRP01833 764 aa21.01■□□□□ 0.95
SSU72-204ENST00000378726 FERP16591 822 aa21.01■□□□□ 0.95
SSU72-204ENST00000378726 MAP2K1Q02750 393 aaPredicted RBP21.01■□□□□ 0.95
SSU72-204ENST00000378726 TAF1CQ15572 869 aaPredicted RBP21.01■□□□□ 0.95
SSU72-204ENST00000378726 PAPD7Q5XG87 772 aaKnown RBP21.01■□□□□ 0.95
SSU72-204ENST00000378726 SLFN12LQ6IEE8 588 aa21.01■□□□□ 0.95
SSU72-204ENST00000378726 USP37Q86T82 979 aa21.01■□□□□ 0.95
SSU72-204ENST00000378726 PPTC7Q8NI37 304 aa21.01■□□□□ 0.95
SSU72-204ENST00000378726 FAM71BQ8TC56 605 aa21.01■□□□□ 0.95
SSU72-204ENST00000378726 EMID1Q96A84 441 aaPredicted RBP21.01■□□□□ 0.95
SSU72-204ENST00000378726 CAPZA3Q96KX2 299 aa21.01■□□□□ 0.95
SSU72-204ENST00000378726 ABHD16BQ9H3Z7 469 aa21.01■□□□□ 0.95
SSU72-204ENST00000378726 KIAA1586Q9HCI6 787 aa21.01■□□□□ 0.95
SSU72-204ENST00000378726 SUCLA2Q9P2R7 463 aaPredicted RBP21.01■□□□□ 0.95
SSU72-204ENST00000378726 AGO2Q9UKV8 859 aaKnown RBP21.01■□□□□ 0.95
SSU72-204ENST00000378726 PLXNA1Q9UIW2 1896 aa21.01■□□□□ 0.95
SSU72-204ENST00000378726 GFPT2O94808 682 aa21■□□□□ 0.95
SSU72-204ENST00000378726 LGALS2P05162 132 aa21■□□□□ 0.95
SSU72-204ENST00000378726 SOX5P35711 763 aa21■□□□□ 0.95
SSU72-204ENST00000378726 ACVR2BQ13705 512 aa21■□□□□ 0.95
SSU72-204ENST00000378726 ARHGAP44Q17R89 818 aa21■□□□□ 0.95
SSU72-204ENST00000378726 KRT39Q6A163 491 aa21■□□□□ 0.95
SSU72-204ENST00000378726 SECISBP2LQ93073 1101 aaKnown RBP21■□□□□ 0.95
SSU72-204ENST00000378726 UBE2TQ9NPD8 197 aaPredicted RBP21■□□□□ 0.95
SSU72-204ENST00000378726 SLC5A4Q9NY91 659 aa21■□□□□ 0.95
SSU72-204ENST00000378726 DAAM1Q9Y4D1 1078 aa21■□□□□ 0.95
SSU72-204ENST00000378726 F8VZ95 297 aa21■□□□□ 0.95
SSU72-204ENST00000378726 PJA2O43164 708 aa21■□□□□ 0.95
SSU72-204ENST00000378726 PPFIA4O75335 1185 aa21■□□□□ 0.95
SSU72-204ENST00000378726 DLATP10515 647 aaKnown RBP21■□□□□ 0.95
SSU72-204ENST00000378726 EFNA5P52803 228 aa21■□□□□ 0.95
SSU72-204ENST00000378726 RNF149Q8NC42 400 aa21■□□□□ 0.95
SSU72-204ENST00000378726 LUC7LQ9NQ29 371 aaKnown RBP21■□□□□ 0.95
SSU72-204ENST00000378726 DCAF8L1A6NGE4 600 aa20.99■□□□□ 0.95
SSU72-204ENST00000378726 SMPD1P17405 629 aa20.99■□□□□ 0.95
SSU72-204ENST00000378726 HSP90B2PQ58FF3 399 aa20.99■□□□□ 0.95
SSU72-204ENST00000378726 EFCAB12Q6NXP0 572 aa20.99■□□□□ 0.95
SSU72-204ENST00000378726 RHPN2Q8IUC4 686 aa20.99■□□□□ 0.95
SSU72-204ENST00000378726 METTL13Q8N6R0 699 aa20.99■□□□□ 0.95
SSU72-204ENST00000378726 GPR88Q9GZN0 384 aa20.99■□□□□ 0.95
SSU72-204ENST00000378726 HAPLN2Q9GZV7 340 aa20.99■□□□□ 0.95
SSU72-204ENST00000378726 TMEM8AQ9HCN3 771 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms