RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 ZNRF3Q9ULT6 936 aa12□□□□□ -0.49
RPGR-203ENST00000378505 HPCAL4Q9UM19 191 aa12□□□□□ -0.49
RPGR-203ENST00000378505 JCADQ9P266 1359 aa12□□□□□ -0.49
RPGR-203ENST00000378505 HUS1O60921 280 aa12□□□□□ -0.49
RPGR-203ENST00000378505 MDH1P40925 334 aaKnown RBP12□□□□□ -0.49
RPGR-203ENST00000378505 BAATQ14032 418 aaPredicted RBP12□□□□□ -0.49
RPGR-203ENST00000378505 COG2Q14746 738 aa12□□□□□ -0.49
RPGR-203ENST00000378505 STAT4Q14765 748 aa12□□□□□ -0.49
RPGR-203ENST00000378505 SNRNP35Q16560 246 aaKnown RBP12□□□□□ -0.49
RPGR-203ENST00000378505 LRIG3Q6UXM1 1119 aa12□□□□□ -0.49
RPGR-203ENST00000378505 NCF2P19878 526 aaPredicted RBP11.99□□□□□ -0.49
RPGR-203ENST00000378505 KLRK1P26718 216 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 STAT5BP51692 787 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 ERVK-24P63145 666 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 HSP90AA5PQ58FG0 334 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 TTI2Q6NXR4 508 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 PPM1NQ8N819 430 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 LRRC37BQ96QE4 947 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 POLR3CQ9BUI4 534 aaPredicted RBP11.99□□□□□ -0.49
RPGR-203ENST00000378505 DONSONQ9NYP3 566 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 SENP1Q9P0U3 644 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 KLHL8Q9P2G9 620 aaPredicted RBP11.99□□□□□ -0.49
RPGR-203ENST00000378505 BAG5Q9UL15 447 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 MEGF6O75095 1541 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 P4HA2O15460 535 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 CHRNA5P30532 468 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 GRB10Q13322 594 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 ZC2HC1CQ53FD0 456 aaPredicted RBP11.99□□□□□ -0.49
RPGR-203ENST00000378505 ZBED8Q8IZ13 594 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 SH2D3CQ8N5H7 860 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 GRAMD1AQ96CP6 724 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 ANGPTL2Q9UKU9 493 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.99□□□□□ -0.49
RPGR-203ENST00000378505 GYG2O15488 501 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 LPXNO60711 386 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 PHF2O75151 1096 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 AGTP01019 485 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 NR3C2P08235 984 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 HMGCS2P54868 508 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 TAF1BQ53T94 588 aaPredicted RBP11.99□□□□□ -0.49
RPGR-203ENST00000378505 CDKAL1Q5VV42 579 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 CATSPER3Q86XQ3 398 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 PPWD1Q96BP3 646 aaKnown RBP11.99□□□□□ -0.49
RPGR-203ENST00000378505 TGS1Q96RS0 853 aaKnown RBP11.99□□□□□ -0.49
RPGR-203ENST00000378505 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.99□□□□□ -0.49
RPGR-203ENST00000378505 STAP1Q9ULZ2 295 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 TYW5A2RUC4 315 aaKnown RBP11.99□□□□□ -0.49
RPGR-203ENST00000378505 ZWINTO95229 277 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 CYP11B2P19099 503 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 FAM102AQ5T9C2 384 aaPredicted RBP11.99□□□□□ -0.49
RPGR-203ENST00000378505 LMBRD2Q68DH5 695 aaPredicted RBP11.99□□□□□ -0.49
RPGR-203ENST00000378505 RIN2Q8WYP3 895 aaPredicted RBP11.99□□□□□ -0.49
RPGR-203ENST00000378505 SDCCAG3Q96C92 435 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 SERPINI1Q99574 410 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 FAM96AQ9H5X1 160 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 FAM217BQ9NTX9 383 aaPredicted RBP11.99□□□□□ -0.49
RPGR-203ENST00000378505 INTUQ9ULD6 942 aa11.99□□□□□ -0.49
RPGR-203ENST00000378505 ADGRB2O60241 1585 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 COPB2P35606 906 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 PEX19P40855 299 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 SNRPFP62306 86 aaKnown RBP11.98□□□□□ -0.49
RPGR-203ENST00000378505 MKRN3Q13064 507 aaKnown RBP11.98□□□□□ -0.49
RPGR-203ENST00000378505 SPATA31A5Q5VU36 1347 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 SPATA31D1Q6ZQQ2 1576 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 TRMT10CQ7L0Y3 403 aaKnown RBP11.98□□□□□ -0.49
RPGR-203ENST00000378505 SPATA31A7Q8IWB4 1347 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 USP38Q8NB14 1042 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 MXRA8Q9BRK3 442 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 PSD3Q9NYI0 1048 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.98□□□□□ -0.49
RPGR-203ENST00000378505 FRMD3A2A2Y4 597 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 MAP3K7O43318 606 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 SLC37A4O43826 429 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 ITIH2P19823 946 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 CIITAP33076 1130 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 CARSP49589 748 aaKnown RBP11.98□□□□□ -0.49
RPGR-203ENST00000378505 ART3Q13508 389 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 LRRC14Q15048 493 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 RNF149Q8NC42 400 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 ATP6V1E2Q96A05 226 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 TRIM51Q9BSJ1 452 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 TRAIPQ9BWF2 469 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 SMARCAL1Q9NZC9 954 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 EIF3HO15372 352 aaKnown RBP eCLIP11.98□□□□□ -0.49
RPGR-203ENST00000378505 RAD51CO43502 376 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 S100BP04271 92 aaPredicted RBP11.98□□□□□ -0.49
RPGR-203ENST00000378505 ARSEP51690 589 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 C4orf50Q6ZRC1 276 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 SLC30A5Q8TAD4 765 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 DHX38Q92620 1227 aaKnown RBP11.98□□□□□ -0.49
RPGR-203ENST00000378505 EPN3Q9H201 632 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 SUCLA2Q9P2R7 463 aaPredicted RBP11.98□□□□□ -0.49
RPGR-203ENST00000378505 ZNF70Q9UC06 446 aaPredicted RBP11.98□□□□□ -0.49
RPGR-203ENST00000378505 SCOCQ9UIL1 159 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 PCDHB2Q9Y5E7 798 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 ALG6Q9Y672 507 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 CDH16O75309 829 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 HSPA4LO95757 839 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 LMNAP02545 664 aaKnown RBP11.98□□□□□ -0.49
RPGR-203ENST00000378505 ICE2Q659A1 982 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms