RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 FAM186BQ8IYM0 893 aa17.22■□□□□ 0.35
CCDC107-204ENST00000378409 GPD1LQ8N335 351 aa17.22■□□□□ 0.35
CCDC107-204ENST00000378409 RDH13Q8NBN7 331 aa17.22■□□□□ 0.35
CCDC107-204ENST00000378409 ANKRD20A12PQ8NF67 263 aa17.22■□□□□ 0.35
CCDC107-204ENST00000378409 TMEM174Q8WUU8 243 aa17.22■□□□□ 0.35
CCDC107-204ENST00000378409 NOC4LQ9BVI4 516 aaKnown RBP17.22■□□□□ 0.35
CCDC107-204ENST00000378409 PTPRHQ9HD43 1115 aa17.22■□□□□ 0.35
CCDC107-204ENST00000378409 AGPAT5Q9NUQ2 364 aa17.22■□□□□ 0.35
CCDC107-204ENST00000378409 ST3GAL5Q9UNP4 418 aa17.22■□□□□ 0.35
CCDC107-204ENST00000378409 PIN4Q9Y237 131 aaKnown RBP17.22■□□□□ 0.35
CCDC107-204ENST00000378409 RALGAPA2Q2PPJ7 1873 aa17.21■□□□□ 0.35
CCDC107-204ENST00000378409 A0A1B0GUA9 196 aa17.21■□□□□ 0.35
CCDC107-204ENST00000378409 PITPNM1O00562 1244 aa17.21■□□□□ 0.35
CCDC107-204ENST00000378409 ABLIM1O14639 778 aa17.21■□□□□ 0.35
CCDC107-204ENST00000378409 KIAA0391O15091 583 aaKnown RBP17.21■□□□□ 0.35
CCDC107-204ENST00000378409 SERPINC1P01008 464 aa17.21■□□□□ 0.35
CCDC107-204ENST00000378409 CLTBP09497 229 aa17.21■□□□□ 0.35
CCDC107-204ENST00000378409 AXLP30530 894 aa17.21■□□□□ 0.35
CCDC107-204ENST00000378409 HOXA11P31270 313 aaPredicted RBP17.21■□□□□ 0.35
CCDC107-204ENST00000378409 CD52P31358 61 aa17.21■□□□□ 0.35
CCDC107-204ENST00000378409 FANCCQ00597 558 aa17.21■□□□□ 0.35
CCDC107-204ENST00000378409 MCL1Q07820 350 aa17.21■□□□□ 0.35
CCDC107-204ENST00000378409 NFX1Q12986 1120 aaKnown RBP17.21■□□□□ 0.35
CCDC107-204ENST00000378409 PAK2Q13177 524 aa17.21■□□□□ 0.35
CCDC107-204ENST00000378409 LPIN1Q14693 890 aa17.21■□□□□ 0.35
CCDC107-204ENST00000378409 KRT31Q15323 416 aa17.21■□□□□ 0.35
CCDC107-204ENST00000378409 ADPGKQ9BRR6 497 aa17.21■□□□□ 0.35
CCDC107-204ENST00000378409 FAM213AQ9BRX8 229 aa17.21■□□□□ 0.35
CCDC107-204ENST00000378409 MKNK1Q9BUB5 465 aa17.21■□□□□ 0.35
CCDC107-204ENST00000378409 OSBPL7Q9BZF2 842 aa17.21■□□□□ 0.35
CCDC107-204ENST00000378409 CDT1Q9H211 546 aa17.21■□□□□ 0.35
CCDC107-204ENST00000378409 HIPK3Q9H422 1215 aa17.21■□□□□ 0.35
CCDC107-204ENST00000378409 AGO3Q9H9G7 860 aaKnown RBP17.21■□□□□ 0.35
CCDC107-204ENST00000378409 GPR182O15218 404 aa17.2■□□□□ 0.34
CCDC107-204ENST00000378409 EXTL3O43909 919 aa17.2■□□□□ 0.34
CCDC107-204ENST00000378409 MCF2P10911 925 aa17.2■□□□□ 0.34
CCDC107-204ENST00000378409 ACOT2P49753 483 aa17.2■□□□□ 0.34
CCDC107-204ENST00000378409 SNRNP35Q16560 246 aaKnown RBP17.2■□□□□ 0.34
CCDC107-204ENST00000378409 SLC27A1Q6PCB7 646 aa17.2■□□□□ 0.34
CCDC107-204ENST00000378409 APBB1IPQ7Z5R6 666 aaPredicted RBP17.2■□□□□ 0.34
CCDC107-204ENST00000378409 FRMD5Q7Z6J6 570 aa17.2■□□□□ 0.34
CCDC107-204ENST00000378409 UBE2Q1Q7Z7E8 422 aa17.2■□□□□ 0.34
CCDC107-204ENST00000378409 CBWD2Q8IUF1 395 aa17.2■□□□□ 0.34
CCDC107-204ENST00000378409 USP38Q8NB14 1042 aa17.2■□□□□ 0.34
CCDC107-204ENST00000378409 PPP1R12CQ9BZL4 782 aa17.2■□□□□ 0.34
CCDC107-204ENST00000378409 KIAA1586Q9HCI6 787 aa17.2■□□□□ 0.34
CCDC107-204ENST00000378409 ERVK-5Q9HDB9 667 aa17.2■□□□□ 0.34
CCDC107-204ENST00000378409 TMEM39AQ9NV64 488 aa17.2■□□□□ 0.34
CCDC107-204ENST00000378409 TAB2Q9NYJ8 693 aa17.2■□□□□ 0.34
CCDC107-204ENST00000378409 ARMCX3Q9UH62 379 aaPredicted RBP17.2■□□□□ 0.34
CCDC107-204ENST00000378409 LIMA1Q9UHB6 759 aaKnown RBP17.2■□□□□ 0.34
CCDC107-204ENST00000378409 PADI3Q9ULW8 664 aa17.2■□□□□ 0.34
CCDC107-204ENST00000378409 SQORQ9Y6N5 450 aa17.2■□□□□ 0.34
CCDC107-204ENST00000378409 TET1Q8NFU7 2136 aa17.2■□□□□ 0.34
CCDC107-204ENST00000378409 UMODL1Q5DID0 1318 aa17.2■□□□□ 0.34
CCDC107-204ENST00000378409 PDCD11Q14690 1871 aaKnown RBP17.19■□□□□ 0.34
CCDC107-204ENST00000378409 TULP1O00294 542 aaPredicted RBP17.19■□□□□ 0.34
CCDC107-204ENST00000378409 OGTO15294 1046 aa17.19■□□□□ 0.34
CCDC107-204ENST00000378409 NPTXRO95502 500 aa17.19■□□□□ 0.34
CCDC107-204ENST00000378409 LDHAP00338 332 aaKnown RBP17.19■□□□□ 0.34
CCDC107-204ENST00000378409 ADRB2P07550 413 aa17.19■□□□□ 0.34
CCDC107-204ENST00000378409 PRKCSHP14314 528 aaPredicted RBP17.19■□□□□ 0.34
CCDC107-204ENST00000378409 COPB1P53618 953 aaKnown RBP17.19■□□□□ 0.34
CCDC107-204ENST00000378409 MARSP56192 900 aaKnown RBP17.19■□□□□ 0.34
CCDC107-204ENST00000378409 HSP90AA2PQ14568 343 aaPredicted RBP17.19■□□□□ 0.34
CCDC107-204ENST00000378409 MBTPS1Q14703 1052 aa17.19■□□□□ 0.34
CCDC107-204ENST00000378409 DCAF4L1Q3SXM0 396 aa17.19■□□□□ 0.34
CCDC107-204ENST00000378409 SEZ6Q53EL9 994 aa17.19■□□□□ 0.34
CCDC107-204ENST00000378409 ZBTB41Q5SVQ8 909 aa17.19■□□□□ 0.34
CCDC107-204ENST00000378409 THNSL1Q8IYQ7 743 aa17.19■□□□□ 0.34
CCDC107-204ENST00000378409 FBXL18Q96ME1 805 aa17.19■□□□□ 0.34
CCDC107-204ENST00000378409 TUBGCP2Q9BSJ2 902 aa17.19■□□□□ 0.34
CCDC107-204ENST00000378409 TRIM5Q9C035 493 aa17.19■□□□□ 0.34
CCDC107-204ENST00000378409 METTL14Q9HCE5 456 aaKnown RBP17.19■□□□□ 0.34
CCDC107-204ENST00000378409 IFNKQ9P0W0 207 aa17.19■□□□□ 0.34
CCDC107-204ENST00000378409 TBX21Q9UL17 535 aa17.19■□□□□ 0.34
CCDC107-204ENST00000378409 ZNF233A6NK53 670 aa17.18■□□□□ 0.34
CCDC107-204ENST00000378409 MAPK13O15264 365 aa17.18■□□□□ 0.34
CCDC107-204ENST00000378409 AP5Z1O43299 807 aa17.18■□□□□ 0.34
CCDC107-204ENST00000378409 TPM2P07951 284 aa17.18■□□□□ 0.34
CCDC107-204ENST00000378409 KRT13P13646 458 aa17.18■□□□□ 0.34
CCDC107-204ENST00000378409 CYP2C18P33260 490 aa17.18■□□□□ 0.34
CCDC107-204ENST00000378409 OSTNP61366 133 aa17.18■□□□□ 0.34
CCDC107-204ENST00000378409 TCERG1LQ5VWI1 586 aa17.18■□□□□ 0.34
CCDC107-204ENST00000378409 TWF2Q6IBS0 349 aaKnown RBP17.18■□□□□ 0.34
CCDC107-204ENST00000378409 SARM1Q6SZW1 724 aa17.18■□□□□ 0.34
CCDC107-204ENST00000378409 APTXQ7Z2E3 356 aaKnown RBP17.18■□□□□ 0.34
CCDC107-204ENST00000378409 TRIM59Q8IWR1 403 aa17.18■□□□□ 0.34
CCDC107-204ENST00000378409 CEP120Q8N960 986 aa17.18■□□□□ 0.34
CCDC107-204ENST00000378409 CCDC51Q96ER9 411 aa17.18■□□□□ 0.34
CCDC107-204ENST00000378409 TRIM6Q9C030 488 aaPredicted RBP17.18■□□□□ 0.34
CCDC107-204ENST00000378409 VPS16Q9H269 839 aa17.18■□□□□ 0.34
CCDC107-204ENST00000378409 PRDM5Q9NQX1 630 aaPredicted RBP17.18■□□□□ 0.34
CCDC107-204ENST00000378409 PES1O00541 588 aaKnown RBP17.17■□□□□ 0.34
CCDC107-204ENST00000378409 FAM189A1O60320 539 aa17.17■□□□□ 0.34
CCDC107-204ENST00000378409 TNFSF9P41273 254 aa17.17■□□□□ 0.34
CCDC107-204ENST00000378409 CCL23P55773 120 aa17.17■□□□□ 0.34
CCDC107-204ENST00000378409 UBASH3AP57075 661 aa17.17■□□□□ 0.34
CCDC107-204ENST00000378409 CYP24A1Q07973 514 aa17.17■□□□□ 0.34
CCDC107-204ENST00000378409 MAN2A1Q16706 1144 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms