RNA–Protein interactions for RNA: ENST00000378402.9

PKHD1L1-201, Transcript of PKHD1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKHD1L1, Length 13,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1L1-201ENST00000378402 ZNF598Q86UK7 904 aaKnown RBP3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 LSMEM2Q8N112 164 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 PLEKHO2Q8TD55 490 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 TRIM31Q9BZY9 425 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 SLC4A4Q9Y6R1 1079 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 A0A087WZG4 1122 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 POLR2DO15514 142 aaKnown RBP3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 RNF113AO15541 343 aaKnown RBP3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 OCM2P0CE71 109 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 OCMP0CE72 109 aaPredicted RBP3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 CDC27P30260 824 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 SLC9A3P48764 834 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 ELP2Q6IA86 826 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 CCSAPQ6IQ19 270 aaPredicted RBP3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 KIAA0408Q6ZU52 694 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 NLRP4Q96MN2 994 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 MUC13Q9H3R2 512 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 RCOR1Q9UKL0 485 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 PCDHB4Q9Y5E5 795 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 PTPN4P29074 926 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 LMOD1P29536 600 aaPredicted RBP3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 ABCG1P45844 678 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 CCT3P49368 545 aaKnown RBP3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 CDK7P50613 346 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 IL1RL1Q01638 556 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 RGL3Q3MIN7 710 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 CNNM4Q6P4Q7 775 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 PROM2Q8N271 834 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 COG3Q96JB2 828 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 CEP72Q9P209 647 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 MKLN1Q9UL63 735 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 SNX14Q9Y5W7 946 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 SSU72P8A0A1W2PR75 194 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 TRIM64CA6NLI5 447 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 PEX1O43933 1283 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 CCNE2O96020 404 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 RAB4AP20338 218 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 SLC34A1Q06495 639 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 FOXD4L6Q3SYB3 417 aaPredicted RBP3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 FOXD4L3Q6VB84 417 aaPredicted RBP3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 SLC2A14Q8TDB8 520 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 TRMT13Q9NUP7 481 aaKnown RBP3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 NPAP1Q9NZP6 1156 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 RNF17Q9BXT8 1623 aaKnown RBP3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 CROCC2H7BZ55 1655 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 A0A087WXM4 84 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 CCDC85CA6NKD9 419 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 SFI1A8K8P3 1242 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 JAK1P23458 1154 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 MAGEA6P43360 314 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 STARP49675 285 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 ZC3H6P61129 1189 aaKnown RBP3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 STAT4Q14765 748 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 DEPDC1Q5TB30 811 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 TMC5Q6UXY8 1006 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 TRIM56Q9BRZ2 755 aaKnown RBP3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 DNAJC28Q9NX36 388 aa3.64□□□□□ -1.83
PKHD1L1-201ENST00000378402 ATP7AQ04656 1500 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 PIPSLA2A3N6 862 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 MCIDASD6RGH6 385 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 CD4P01730 458 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 TCF7P36402 384 aaPredicted RBP3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 CEBPAP49715 358 aaPredicted RBP3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 ARHGDIAP52565 204 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 PPIDQ08752 370 aaKnown RBP3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 ARHGAP44Q17R89 818 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 ULK2Q8IYT8 1036 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 DTNAQ9Y4J8 743 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 NFAT5O94916 1531 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 RNF103O00237 685 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 ZBTB39O15060 712 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 EXTL3O43909 919 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 CCDC130P13994 396 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 ATF6P18850 670 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 RXRBP28702 533 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 LRRC74AQ0VAA2 488 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 PPIL2Q13356 520 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 CAPRIN1Q14444 709 aaKnown RBP3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 DIXDC1Q155Q3 683 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 KRT79Q5XKE5 535 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 C4orf22Q6V702 233 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 FAM47EQ6ZV65 393 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 TRIM69Q86WT6 500 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 NSUN7Q8NE18 718 aaKnown RBP3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 TMCO6Q96DC7 493 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 HAPLN3Q96S86 360 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 TRAF4Q9BUZ4 470 aaPredicted RBP3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 TEX13BQ9BXU2 312 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 ZC3H12CQ9C0D7 883 aaKnown RBP3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 ZHX2Q9Y6X8 837 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 TMEM114B3SHH9 223 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 TRAF5O00463 557 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 VAPBO95292 243 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 VPS41P49754 854 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 PAPD7Q5XG87 772 aaKnown RBP3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 LRRC31Q6UY01 552 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 GAS2L2Q8NHY3 880 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 MMS19Q96T76 1030 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 GPAMQ9HCL2 828 aa3.63□□□□□ -1.83
PKHD1L1-201ENST00000378402 CYP39A1Q9NYL5 469 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms