RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 DAGLBQ8NCG7 672 aa15.99■□□□□ 0.15
NPHP4-201ENST00000378156 PRMT6Q96LA8 375 aaPredicted RBP15.99■□□□□ 0.15
NPHP4-201ENST00000378156 ATP6V1G3Q96LB4 118 aa15.99■□□□□ 0.15
NPHP4-201ENST00000378156 RIT2Q99578 217 aa15.99■□□□□ 0.15
NPHP4-201ENST00000378156 NUP85Q9BW27 656 aa15.99■□□□□ 0.15
NPHP4-201ENST00000378156 VIPAS39Q9H9C1 493 aa15.99■□□□□ 0.15
NPHP4-201ENST00000378156 RPA1P27694 616 aa15.99■□□□□ 0.15
NPHP4-201ENST00000378156 GUCY1A3Q02108 690 aa15.99■□□□□ 0.15
NPHP4-201ENST00000378156 TTI2Q6NXR4 508 aa15.99■□□□□ 0.15
NPHP4-201ENST00000378156 EHD2Q9NZN4 543 aa15.99■□□□□ 0.15
NPHP4-201ENST00000378156 KCND2Q9NZV8 630 aa15.99■□□□□ 0.15
NPHP4-201ENST00000378156 EPS15L1Q9UBC2 864 aa15.99■□□□□ 0.15
NPHP4-201ENST00000378156 HPCAL4Q9UM19 191 aa15.99■□□□□ 0.15
NPHP4-201ENST00000378156 A0A087X0B3 334 aa15.98■□□□□ 0.15
NPHP4-201ENST00000378156 A0A1W2PQJ5 194 aa15.98■□□□□ 0.15
NPHP4-201ENST00000378156 TTC4O95801 387 aa15.98■□□□□ 0.15
NPHP4-201ENST00000378156 ASPHQ12797 758 aa15.98■□□□□ 0.15
NPHP4-201ENST00000378156 KBTBD4Q9NVX7 518 aa15.98■□□□□ 0.15
NPHP4-201ENST00000378156 AP3M2P53677 418 aa15.98■□□□□ 0.15
NPHP4-201ENST00000378156 GRB10Q13322 594 aa15.98■□□□□ 0.15
NPHP4-201ENST00000378156 FUT8Q9BYC5 575 aa15.98■□□□□ 0.15
NPHP4-201ENST00000378156 GOLPH3Q9H4A6 298 aa15.98■□□□□ 0.15
NPHP4-201ENST00000378156 ANGPTL2Q9UKU9 493 aa15.98■□□□□ 0.15
NPHP4-201ENST00000378156 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.98■□□□□ 0.15
NPHP4-201ENST00000378156 BAZ2BQ9UIF8 2168 aaKnown RBP15.98■□□□□ 0.15
NPHP4-201ENST00000378156 MAP3K7O43318 606 aa15.98■□□□□ 0.15
NPHP4-201ENST00000378156 KLRC1P26715 233 aa15.98■□□□□ 0.15
NPHP4-201ENST00000378156 SARSP49591 514 aaKnown RBP15.98■□□□□ 0.15
NPHP4-201ENST00000378156 PLCB4Q15147 1175 aa15.98■□□□□ 0.15
NPHP4-201ENST00000378156 C3orf67Q6ZVT6 689 aa15.98■□□□□ 0.15
NPHP4-201ENST00000378156 RAPH1Q70E73 1250 aa15.98■□□□□ 0.15
NPHP4-201ENST00000378156 RNPC3Q96LT9 517 aaKnown RBP15.98■□□□□ 0.15
NPHP4-201ENST00000378156 ZDHHC15Q96MV8 337 aa15.98■□□□□ 0.15
NPHP4-201ENST00000378156 MXRA8Q9BRK3 442 aa15.98■□□□□ 0.15
NPHP4-201ENST00000378156 ASNSD1Q9NWL6 643 aa15.98■□□□□ 0.15
NPHP4-201ENST00000378156 PLAGL2Q9UPG8 496 aa15.98■□□□□ 0.15
NPHP4-201ENST00000378156 PMS2P54278 862 aa15.98■□□□□ 0.15
NPHP4-201ENST00000378156 GALCP54803 685 aa15.98■□□□□ 0.15
NPHP4-201ENST00000378156 TTC39CQ8N584 583 aa15.98■□□□□ 0.15
NPHP4-201ENST00000378156 LACRTQ9GZZ8 138 aa15.98■□□□□ 0.15
NPHP4-201ENST00000378156 PRKAG2Q9UGJ0 569 aa15.98■□□□□ 0.15
NPHP4-201ENST00000378156 KIAA0391O15091 583 aaKnown RBP15.97■□□□□ 0.15
NPHP4-201ENST00000378156 SLC16A3O15427 465 aaKnown RBP15.97■□□□□ 0.15
NPHP4-201ENST00000378156 MT-ND3P03897 115 aa15.97■□□□□ 0.15
NPHP4-201ENST00000378156 ELF1P32519 619 aa15.97■□□□□ 0.15
NPHP4-201ENST00000378156 CENPUQ71F23 418 aa15.97■□□□□ 0.15
NPHP4-201ENST00000378156 LRGUKQ96M69 825 aa15.97■□□□□ 0.15
NPHP4-201ENST00000378156 AGBL1Q96MI9 1066 aa15.97■□□□□ 0.15
NPHP4-201ENST00000378156 DNAJC7Q99615 494 aa15.97■□□□□ 0.15
NPHP4-201ENST00000378156 EFHD1Q9BUP0 239 aa15.97■□□□□ 0.15
NPHP4-201ENST00000378156 SLITRK6Q9H5Y7 841 aa15.97■□□□□ 0.15
NPHP4-201ENST00000378156 EDRF1Q3B7T1 1238 aa15.97■□□□□ 0.15
NPHP4-201ENST00000378156 MUM1L1Q5H9M0 696 aa15.97■□□□□ 0.15
NPHP4-201ENST00000378156 TRIM65Q6PJ69 517 aa15.97■□□□□ 0.15
NPHP4-201ENST00000378156 TTC13Q8NBP0 860 aa15.97■□□□□ 0.15
NPHP4-201ENST00000378156 PYROXD1Q8WU10 500 aa15.97■□□□□ 0.15
NPHP4-201ENST00000378156 MAFGO15525 162 aa15.97■□□□□ 0.15
NPHP4-201ENST00000378156 PPP2R2AP63151 447 aa15.97■□□□□ 0.15
NPHP4-201ENST00000378156 THEM5Q8N1Q8 247 aa15.97■□□□□ 0.15
NPHP4-201ENST00000378156 LCMT1Q9UIC8 334 aa15.97■□□□□ 0.15
NPHP4-201ENST00000378156 BAG5Q9UL15 447 aa15.97■□□□□ 0.15
NPHP4-201ENST00000378156 GOLGA8CPA6NN73 597 aa15.97■□□□□ 0.15
NPHP4-201ENST00000378156 GPC4O75487 556 aa15.97■□□□□ 0.15
NPHP4-201ENST00000378156 LMNAP02545 664 aaKnown RBP15.97■□□□□ 0.15
NPHP4-201ENST00000378156 ZC2HC1CQ53FD0 456 aaPredicted RBP15.97■□□□□ 0.15
NPHP4-201ENST00000378156 TRIM72Q6ZMU5 477 aa15.97■□□□□ 0.15
NPHP4-201ENST00000378156 VGLL2Q8N8G2 317 aa15.97■□□□□ 0.15
NPHP4-201ENST00000378156 MLXIPLQ9NP71 852 aa15.97■□□□□ 0.15
NPHP4-201ENST00000378156 HSPBP1Q9NZL4 362 aa15.97■□□□□ 0.15
NPHP4-201ENST00000378156 SMIM22K7EJ46 135 aa15.96■□□□□ 0.15
NPHP4-201ENST00000378156 CIITAP33076 1130 aa15.96■□□□□ 0.15
NPHP4-201ENST00000378156 BIRC2Q13490 618 aa15.96■□□□□ 0.15
NPHP4-201ENST00000378156 TMEM143Q96AN5 459 aa15.96■□□□□ 0.15
NPHP4-201ENST00000378156 SMYD2Q9NRG4 433 aa15.96■□□□□ 0.15
NPHP4-201ENST00000378156 WDR91A4D1P6 747 aa15.96■□□□□ 0.15
NPHP4-201ENST00000378156 GMNCA6NCL1 334 aa15.96■□□□□ 0.15
NPHP4-201ENST00000378156 TNPO2O14787 897 aaKnown RBP15.96■□□□□ 0.15
NPHP4-201ENST00000378156 CA4P22748 312 aa15.96■□□□□ 0.15
NPHP4-201ENST00000378156 CARSP49589 748 aaKnown RBP15.96■□□□□ 0.15
NPHP4-201ENST00000378156 PMS1P54277 932 aaKnown RBP15.96■□□□□ 0.15
NPHP4-201ENST00000378156 POLE2P56282 527 aa15.96■□□□□ 0.15
NPHP4-201ENST00000378156 PSMC1P62191 440 aaKnown RBP15.96■□□□□ 0.15
NPHP4-201ENST00000378156 BEND6Q5SZJ8 279 aaPredicted RBP15.96■□□□□ 0.15
NPHP4-201ENST00000378156 MFSD14CQ5VZR4 134 aa15.96■□□□□ 0.15
NPHP4-201ENST00000378156 HNRNPLLQ8WVV9 542 aaKnown RBP15.96■□□□□ 0.15
NPHP4-201ENST00000378156 ATG4CQ96DT6 458 aa15.96■□□□□ 0.15
NPHP4-201ENST00000378156 RTFDC1Q9BY42 306 aaPredicted RBP15.96■□□□□ 0.15
NPHP4-201ENST00000378156 FBXO28Q9NVF7 368 aa15.96■□□□□ 0.15
NPHP4-201ENST00000378156 HACL1Q9UJ83 578 aa15.96■□□□□ 0.15
NPHP4-201ENST00000378156 MAGED2Q9UNF1 606 aaPredicted RBP15.96■□□□□ 0.15
NPHP4-201ENST00000378156 MYO5BQ9ULV0 1848 aa15.96■□□□□ 0.15
NPHP4-201ENST00000378156 BCL9O00512 1426 aa15.96■□□□□ 0.15
NPHP4-201ENST00000378156 KRT14P02533 472 aa15.96■□□□□ 0.15
NPHP4-201ENST00000378156 PRKCBP05771 671 aa15.96■□□□□ 0.15
NPHP4-201ENST00000378156 SDC4P31431 198 aa15.96■□□□□ 0.15
NPHP4-201ENST00000378156 DEFB132Q7Z7B7 95 aa15.96■□□□□ 0.15
NPHP4-201ENST00000378156 PDZD8Q8NEN9 1154 aa15.96■□□□□ 0.15
NPHP4-201ENST00000378156 XAB2Q9HCS7 855 aaKnown RBP15.96■□□□□ 0.15
NPHP4-201ENST00000378156 TTI1O43156 1089 aa15.96■□□□□ 0.14
NPHP4-201ENST00000378156 SNAPC2Q13487 334 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms