RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 UPP2O95045 317 aa8.72□□□□□ -1.01
CKAP2-203ENST00000378037 NPTXRO95502 500 aa8.72□□□□□ -1.01
CKAP2-203ENST00000378037 CCDC172P0C7W6 258 aa8.72□□□□□ -1.01
CKAP2-203ENST00000378037 CXCL8P10145 99 aa8.72□□□□□ -1.01
CKAP2-203ENST00000378037 BRD2P25440 801 aaKnown RBP8.72□□□□□ -1.01
CKAP2-203ENST00000378037 ADORA2BP29275 332 aa8.72□□□□□ -1.01
CKAP2-203ENST00000378037 PSMD2Q13200 908 aa8.72□□□□□ -1.01
CKAP2-203ENST00000378037 CCDC38Q502W7 563 aa8.72□□□□□ -1.01
CKAP2-203ENST00000378037 FAM160B1Q5W0V3 765 aa8.72□□□□□ -1.01
CKAP2-203ENST00000378037 LRRC55Q6ZSA7 311 aa8.72□□□□□ -1.01
CKAP2-203ENST00000378037 EMC1Q8N766 993 aa8.72□□□□□ -1.01
CKAP2-203ENST00000378037 ANKRD42Q8N9B4 389 aa8.72□□□□□ -1.01
CKAP2-203ENST00000378037 HSPH1Q92598 858 aa8.72□□□□□ -1.01
CKAP2-203ENST00000378037 RNF34Q969K3 372 aa8.72□□□□□ -1.01
CKAP2-203ENST00000378037 SLC35C1Q96A29 364 aa8.72□□□□□ -1.01
CKAP2-203ENST00000378037 CEP72Q9P209 647 aa8.72□□□□□ -1.01
CKAP2-203ENST00000378037 PIN4Q9Y237 131 aaKnown RBP8.72□□□□□ -1.01
CKAP2-203ENST00000378037 CEP83Q9Y592 693 aa8.72□□□□□ -1.01
CKAP2-203ENST00000378037 ZNF263O14978 683 aa8.71□□□□□ -1.01
CKAP2-203ENST00000378037 HSF2BPO75031 334 aa8.71□□□□□ -1.01
CKAP2-203ENST00000378037 NEBLO76041 1014 aa8.71□□□□□ -1.01
CKAP2-203ENST00000378037 ADRB2P07550 413 aa8.71□□□□□ -1.01
CKAP2-203ENST00000378037 ITGA4P13612 1032 aa8.71□□□□□ -1.01
CKAP2-203ENST00000378037 PLS3P13797 630 aa8.71□□□□□ -1.01
CKAP2-203ENST00000378037 PPP1R2P41236 205 aa8.71□□□□□ -1.01
CKAP2-203ENST00000378037 SEL1L2Q5TEA6 688 aa8.71□□□□□ -1.01
CKAP2-203ENST00000378037 NT5DC1Q5TFE4 455 aa8.71□□□□□ -1.01
CKAP2-203ENST00000378037 PLCD3Q8N3E9 789 aa8.71□□□□□ -1.01
CKAP2-203ENST00000378037 SEPT1Q8WYJ6 367 aa8.71□□□□□ -1.01
CKAP2-203ENST00000378037 RANBP17Q9H2T7 1088 aaKnown RBP8.71□□□□□ -1.01
CKAP2-203ENST00000378037 SEPT10Q9P0V9 454 aa8.71□□□□□ -1.01
CKAP2-203ENST00000378037 VAV3Q9UKW4 847 aa8.71□□□□□ -1.01
CKAP2-203ENST00000378037 TBX20Q9UMR3 447 aa8.71□□□□□ -1.01
CKAP2-203ENST00000378037 REXO2Q9Y3B8 237 aaKnown RBP8.71□□□□□ -1.01
CKAP2-203ENST00000378037 SNX9Q9Y5X1 595 aa8.71□□□□□ -1.01
CKAP2-203ENST00000378037 IRS2Q9Y4H2 1338 aa8.71□□□□□ -1.01
CKAP2-203ENST00000378037 MYH10P35580 1976 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 RANBP2P49792 3224 aaKnown RBP8.71□□□□□ -1.02
CKAP2-203ENST00000378037 GOLGA6BA6NDN3 693 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 PDE2AO00408 941 aaPredicted RBP8.71□□□□□ -1.02
CKAP2-203ENST00000378037 FANCGO15287 622 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 TGFB1I1O43294 461 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 EDIL3O43854 480 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 ACSL3O95573 720 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 PRKCBP05771 671 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 GGCXP38435 758 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 JAK3P52333 1124 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 BCAR1P56945 870 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 CCNA1P78396 465 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 KLHDC7AQ5VTJ3 777 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 MMS22LQ6ZRQ5 1243 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 SV2AQ7L0J3 742 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 MTERF4Q7Z6M4 381 aaKnown RBP8.71□□□□□ -1.02
CKAP2-203ENST00000378037 ERO1BQ86YB8 467 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 OR6J1Q8NGC5 347 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 SLC35G2Q8TBE7 412 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.71□□□□□ -1.02
CKAP2-203ENST00000378037 KIFAP3Q92845 792 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 GMLQ99445 158 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 HSD17B14Q9BPX1 270 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 MRFAP1Q9Y605 127 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 SLX4Q8IY92 1834 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 SBF1O95248 1867 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 IGLV3-22A0A075B6J6 115 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 PDXKO00764 312 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 ZNF200P98182 395 aaPredicted RBP8.71□□□□□ -1.02
CKAP2-203ENST00000378037 TTLL4Q14679 1199 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 KRT71Q3SY84 523 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 MAP9Q49MG5 647 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 TMEM119Q4V9L6 283 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 OR6B2Q6IFH4 312 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 C1orf186Q6ZWK4 172 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 CEP57Q86XR8 500 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 ASAP3Q8TDY4 903 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 CLEC4DQ8WXI8 215 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 TEPSINQ96N21 525 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 ADPGKQ9BRR6 497 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 MED10Q9BTT4 135 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 NUP85Q9BW27 656 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 TMEM206Q9H813 350 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 ZNF148Q9UQR1 794 aa8.71□□□□□ -1.02
CKAP2-203ENST00000378037 SPTBN2O15020 2390 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 TIAM2Q8IVF5 1701 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 CYP3A7-CYP3A51PA0A087WV96 503 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 TTLL13PA6NNM8 815 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 TADA3O75528 432 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 KRT14P02533 472 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 TNNC2P02585 160 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 SLC4A1P02730 911 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 MYL1P05976 194 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 INSRRP14616 1297 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 PHKA2P46019 1235 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 SNAPC2Q13487 334 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 INTS8Q75QN2 995 aaKnown RBP8.7□□□□□ -1.02
CKAP2-203ENST00000378037 KDELC2Q7Z4H8 507 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 TXLNBQ8N3L3 684 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 BHMTQ93088 406 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 SGIP1Q9BQI5 828 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 GBA2Q9HCG7 927 aaPredicted RBP8.7□□□□□ -1.02
CKAP2-203ENST00000378037 ADAM22Q9P0K1 906 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms