RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 NHLH1Q02575 133 aa10.71□□□□□ -0.69
C9orf85-202ENST00000377027 SSRP1Q08945 709 aaKnown RBP10.71□□□□□ -0.69
C9orf85-202ENST00000377027 SPIRE1Q08AE8 756 aa10.71□□□□□ -0.69
C9orf85-202ENST00000377027 TBC1D8BQ0IIM8 1120 aa10.71□□□□□ -0.69
C9orf85-202ENST00000377027 ODR4Q5SWX8 454 aa10.71□□□□□ -0.69
C9orf85-202ENST00000377027 ANKRD54Q6NXT1 300 aa10.71□□□□□ -0.69
C9orf85-202ENST00000377027 LLGL2Q6P1M3 1020 aa10.71□□□□□ -0.69
C9orf85-202ENST00000377027 FAM43BQ6ZT52 329 aaPredicted RBP10.71□□□□□ -0.69
C9orf85-202ENST00000377027 MIER3Q7Z3K6 550 aa10.71□□□□□ -0.69
C9orf85-202ENST00000377027 LRRC43Q8N309 656 aa10.71□□□□□ -0.69
C9orf85-202ENST00000377027 RNF169Q8NCN4 708 aa10.71□□□□□ -0.69
C9orf85-202ENST00000377027 PRSS33Q8NF86 280 aa10.71□□□□□ -0.69
C9orf85-202ENST00000377027 RDM1Q8NG50 284 aa10.71□□□□□ -0.69
C9orf85-202ENST00000377027 EDAQ92838 391 aa10.71□□□□□ -0.69
C9orf85-202ENST00000377027 HAS1Q92839 578 aa10.71□□□□□ -0.69
C9orf85-202ENST00000377027 POP1Q99575 1024 aaKnown RBP10.71□□□□□ -0.69
C9orf85-202ENST00000377027 FDXACB1Q9BRP7 624 aaPredicted RBP10.71□□□□□ -0.69
C9orf85-202ENST00000377027 PHF20Q9BVI0 1012 aa10.71□□□□□ -0.69
C9orf85-202ENST00000377027 TM6SF1Q9BZW5 370 aa10.71□□□□□ -0.69
C9orf85-202ENST00000377027 MINDY3Q9H8M7 445 aa10.71□□□□□ -0.69
C9orf85-202ENST00000377027 IFT122Q9HBG6 1241 aa10.71□□□□□ -0.69
C9orf85-202ENST00000377027 KCNMB3Q9NPA1 279 aa10.71□□□□□ -0.69
C9orf85-202ENST00000377027 NRBP2Q9NSY0 501 aa10.71□□□□□ -0.69
C9orf85-202ENST00000377027 TDRD15B5MCY1 1934 aaKnown RBP10.7□□□□□ -0.7
C9orf85-202ENST00000377027 A0A1W2PRU2 124 aa10.7□□□□□ -0.7
C9orf85-202ENST00000377027 C2orf71A6NGG8 1288 aa10.7□□□□□ -0.7
C9orf85-202ENST00000377027 TTLL8A6PVC2 850 aa10.7□□□□□ -0.7
C9orf85-202ENST00000377027 ZBTB39O15060 712 aa10.7□□□□□ -0.7
C9orf85-202ENST00000377027 LZTS3O60299 673 aaPredicted RBP10.7□□□□□ -0.7
C9orf85-202ENST00000377027 REC8O95072 547 aa10.7□□□□□ -0.7
C9orf85-202ENST00000377027 LARGE1O95461 756 aa10.7□□□□□ -0.7
C9orf85-202ENST00000377027 CTSOP43234 321 aaPredicted RBP10.7□□□□□ -0.7
C9orf85-202ENST00000377027 PHKA2P46019 1235 aa10.7□□□□□ -0.7
C9orf85-202ENST00000377027 ZXDAP98168 799 aa10.7□□□□□ -0.7
C9orf85-202ENST00000377027 LONRF3Q496Y0 759 aa10.7□□□□□ -0.7
C9orf85-202ENST00000377027 XKR3Q5GH77 459 aa10.7□□□□□ -0.7
C9orf85-202ENST00000377027 KANK3Q6NY19 840 aa10.7□□□□□ -0.7
C9orf85-202ENST00000377027 MOXD1Q6UVY6 613 aa10.7□□□□□ -0.7
C9orf85-202ENST00000377027 MICAL1Q8TDZ2 1067 aa10.7□□□□□ -0.7
C9orf85-202ENST00000377027 AUTS2Q8WXX7 1259 aa10.7□□□□□ -0.7
C9orf85-202ENST00000377027 PPP2R3CQ969Q6 453 aa10.7□□□□□ -0.7
C9orf85-202ENST00000377027 ASIC4Q96FT7 647 aa10.7□□□□□ -0.7
C9orf85-202ENST00000377027 ZNF558Q96NG5 402 aa10.7□□□□□ -0.7
C9orf85-202ENST00000377027 CDCA3Q99618 268 aaPredicted RBP10.7□□□□□ -0.7
C9orf85-202ENST00000377027 TRAIPQ9BWF2 469 aa10.7□□□□□ -0.7
C9orf85-202ENST00000377027 PHF7Q9BWX1 381 aaPredicted RBP10.7□□□□□ -0.7
C9orf85-202ENST00000377027 TCEAL9Q9UHQ7 104 aa10.7□□□□□ -0.7
C9orf85-202ENST00000377027 TPCN1Q9ULQ1 816 aa10.7□□□□□ -0.7
C9orf85-202ENST00000377027 HCFC2Q9Y5Z7 792 aa10.7□□□□□ -0.7
C9orf85-202ENST00000377027 CYP46A1Q9Y6A2 500 aa10.7□□□□□ -0.7
C9orf85-202ENST00000377027 DCHS1Q96JQ0 3298 aa10.69□□□□□ -0.7
C9orf85-202ENST00000377027 TMEM221A6NGB7 291 aa10.69□□□□□ -0.7
C9orf85-202ENST00000377027 M0R296 226 aa10.69□□□□□ -0.7
C9orf85-202ENST00000377027 EPB41L2O43491 1005 aaKnown RBP10.69□□□□□ -0.7
C9orf85-202ENST00000377027 ATP9BO43861 1147 aa10.69□□□□□ -0.7
C9orf85-202ENST00000377027 CLASP2O75122 1294 aaKnown RBP10.69□□□□□ -0.7
C9orf85-202ENST00000377027 EOMESO95936 686 aa10.69□□□□□ -0.7
C9orf85-202ENST00000377027 FDPSP14324 419 aaKnown RBP10.69□□□□□ -0.7
C9orf85-202ENST00000377027 ZSCAN20P17040 1043 aaPredicted RBP10.69□□□□□ -0.7
C9orf85-202ENST00000377027 SP100P23497 879 aaPredicted RBP10.69□□□□□ -0.7
C9orf85-202ENST00000377027 TMOD1P28289 359 aa10.69□□□□□ -0.7
C9orf85-202ENST00000377027 TECP42680 631 aa10.69□□□□□ -0.7
C9orf85-202ENST00000377027 BCAR1P56945 870 aa10.69□□□□□ -0.7
C9orf85-202ENST00000377027 PPP2R5CQ13362 524 aa10.69□□□□□ -0.7
C9orf85-202ENST00000377027 NONOQ15233 471 aaKnown RBP eCLIP10.69□□□□□ -0.7
C9orf85-202ENST00000377027 UBXN11Q5T124 520 aa10.69□□□□□ -0.7
C9orf85-202ENST00000377027 BMP8AQ7Z5Y6 402 aa10.69□□□□□ -0.7
C9orf85-202ENST00000377027 ALYREFQ86V81 257 aaKnown RBP10.69□□□□□ -0.7
C9orf85-202ENST00000377027 TNFRSF25Q93038 417 aa10.69□□□□□ -0.7
C9orf85-202ENST00000377027 RPGRIP1Q96KN7 1286 aa10.69□□□□□ -0.7
C9orf85-202ENST00000377027 ZBP1Q9H171 429 aa10.69□□□□□ -0.7
C9orf85-202ENST00000377027 SMOC2Q9H3U7 446 aa10.69□□□□□ -0.7
C9orf85-202ENST00000377027 POMKQ9H5K3 350 aa10.69□□□□□ -0.7
C9orf85-202ENST00000377027 NRDE2Q9H7Z3 1164 aa10.69□□□□□ -0.7
C9orf85-202ENST00000377027 ENTPD7Q9NQZ7 604 aa10.69□□□□□ -0.7
C9orf85-202ENST00000377027 TBC1D13Q9NVG8 400 aa10.69□□□□□ -0.7
C9orf85-202ENST00000377027 SPG21Q9NZD8 308 aa10.69□□□□□ -0.7
C9orf85-202ENST00000377027 SUCLA2Q9P2R7 463 aaPredicted RBP10.69□□□□□ -0.7
C9orf85-202ENST00000377027 DNAJB4Q9UDY4 337 aa10.69□□□□□ -0.7
C9orf85-202ENST00000377027 DDX25Q9UHL0 483 aaKnown RBP10.69□□□□□ -0.7
C9orf85-202ENST00000377027 FRYLO94915 3013 aa10.69□□□□□ -0.7
C9orf85-202ENST00000377027 WDR87Q6ZQQ6 2873 aa10.69□□□□□ -0.7
C9orf85-202ENST00000377027 STK36Q9NRP7 1315 aa10.68□□□□□ -0.7
C9orf85-202ENST00000377027 SOBPA7XYQ1 873 aa10.68□□□□□ -0.7
C9orf85-202ENST00000377027 MAN1A2O60476 641 aa10.68□□□□□ -0.7
C9orf85-202ENST00000377027 PDGFBP01127 241 aaPredicted RBP10.68□□□□□ -0.7
C9orf85-202ENST00000377027 WEE2P0C1S8 567 aa10.68□□□□□ -0.7
C9orf85-202ENST00000377027 HOXA11P31270 313 aaPredicted RBP10.68□□□□□ -0.7
C9orf85-202ENST00000377027 VCPP55072 806 aaKnown RBP10.68□□□□□ -0.7
C9orf85-202ENST00000377027 ST3GAL1Q11201 340 aa10.68□□□□□ -0.7
C9orf85-202ENST00000377027 NCOA4Q13772 614 aa10.68□□□□□ -0.7
C9orf85-202ENST00000377027 LETM2Q2VYF4 491 aa10.68□□□□□ -0.7
C9orf85-202ENST00000377027 EML3Q32P44 896 aa10.68□□□□□ -0.7
C9orf85-202ENST00000377027 PDE12Q6L8Q7 609 aaKnown RBP10.68□□□□□ -0.7
C9orf85-202ENST00000377027 AGMOQ6ZNB7 445 aa10.68□□□□□ -0.7
C9orf85-202ENST00000377027 KRT25Q7Z3Z0 450 aa10.68□□□□□ -0.7
C9orf85-202ENST00000377027 ZNF280BQ86YH2 543 aa10.68□□□□□ -0.7
C9orf85-202ENST00000377027 RHPN2Q8IUC4 686 aa10.68□□□□□ -0.7
C9orf85-202ENST00000377027 TRIM22Q8IYM9 498 aa10.68□□□□□ -0.7
C9orf85-202ENST00000377027 DEPDC4Q8N2C3 294 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms