RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 ORC2Q13416 577 aaPredicted RBP13.56□□□□□ -0.24
VRK3-202ENST00000377011 RRAGBQ5VZM2 374 aa13.56□□□□□ -0.24
VRK3-202ENST00000377011 LRRC15Q8TF66 581 aa13.56□□□□□ -0.24
VRK3-202ENST00000377011 CCSER1Q9C0I3 900 aa13.56□□□□□ -0.24
VRK3-202ENST00000377011 MINDY3Q9H8M7 445 aa13.56□□□□□ -0.24
VRK3-202ENST00000377011 RC3H2Q9HBD1 1191 aaKnown RBP13.56□□□□□ -0.24
VRK3-202ENST00000377011 GPRC5CQ9NQ84 441 aa13.56□□□□□ -0.24
VRK3-202ENST00000377011 SUCLA2Q9P2R7 463 aaPredicted RBP13.56□□□□□ -0.24
VRK3-202ENST00000377011 LINC01553A4QN01 128 aa13.55□□□□□ -0.24
VRK3-202ENST00000377011 M0QZ92 97 aa13.55□□□□□ -0.24
VRK3-202ENST00000377011 RPS6KA5O75582 802 aa13.55□□□□□ -0.24
VRK3-202ENST00000377011 AMHP03971 560 aa13.55□□□□□ -0.24
VRK3-202ENST00000377011 GYPCP04921 128 aa13.55□□□□□ -0.24
VRK3-202ENST00000377011 TUBBP07437 444 aa13.55□□□□□ -0.24
VRK3-202ENST00000377011 RARRES1P49788 294 aa13.55□□□□□ -0.24
VRK3-202ENST00000377011 KRT31Q15323 416 aa13.55□□□□□ -0.24
VRK3-202ENST00000377011 TCP11X2Q5H9J9 407 aa13.55□□□□□ -0.24
VRK3-202ENST00000377011 CYP26C1Q6V0L0 522 aa13.55□□□□□ -0.24
VRK3-202ENST00000377011 RAD9BQ6WBX8 426 aa13.55□□□□□ -0.24
VRK3-202ENST00000377011 KCNK18Q7Z418 384 aa13.55□□□□□ -0.24
VRK3-202ENST00000377011 RHPN2Q8IUC4 686 aa13.55□□□□□ -0.24
VRK3-202ENST00000377011 ASAP3Q8TDY4 903 aa13.55□□□□□ -0.24
VRK3-202ENST00000377011 ARNTL2Q8WYA1 636 aa13.55□□□□□ -0.24
VRK3-202ENST00000377011 C17orf80Q9BSJ5 609 aa13.55□□□□□ -0.24
VRK3-202ENST00000377011 ZBED2Q9BTP6 218 aa13.55□□□□□ -0.24
VRK3-202ENST00000377011 MRPL44Q9H9J2 332 aaKnown RBP13.55□□□□□ -0.24
VRK3-202ENST00000377011 A0A1W2PQC6 194 aa13.54□□□□□ -0.24
VRK3-202ENST00000377011 SOWAHDA6NJG2 315 aa13.54□□□□□ -0.24
VRK3-202ENST00000377011 N4BP3O15049 544 aa13.54□□□□□ -0.24
VRK3-202ENST00000377011 LPXNO60711 386 aa13.54□□□□□ -0.24
VRK3-202ENST00000377011 LYPLA2O95372 231 aa13.54□□□□□ -0.24
VRK3-202ENST00000377011 DARSP14868 501 aaKnown RBP13.54□□□□□ -0.24
VRK3-202ENST00000377011 EEF1GP26641 437 aaKnown RBP13.54□□□□□ -0.24
VRK3-202ENST00000377011 STAT6P42226 847 aa13.54□□□□□ -0.24
VRK3-202ENST00000377011 FXR2P51116 673 aaKnown RBP eCLIP13.54□□□□□ -0.24
VRK3-202ENST00000377011 STX17P56962 302 aa13.54□□□□□ -0.24
VRK3-202ENST00000377011 STIM1Q13586 685 aa13.54□□□□□ -0.24
VRK3-202ENST00000377011 DSC3Q14574 896 aa13.54□□□□□ -0.24
VRK3-202ENST00000377011 EMC2Q15006 297 aa13.54□□□□□ -0.24
VRK3-202ENST00000377011 BRD3Q15059 726 aa13.54□□□□□ -0.24
VRK3-202ENST00000377011 TEX35Q5T0J7 233 aa13.54□□□□□ -0.24
VRK3-202ENST00000377011 MAEAQ7L5Y9 396 aa13.54□□□□□ -0.24
VRK3-202ENST00000377011 PRPF31Q8WWY3 499 aaKnown RBP13.54□□□□□ -0.24
VRK3-202ENST00000377011 NELFBQ8WX92 580 aa13.54□□□□□ -0.24
VRK3-202ENST00000377011 APBB2Q92870 758 aa13.54□□□□□ -0.24
VRK3-202ENST00000377011 AK8Q96MA6 479 aa13.54□□□□□ -0.24
VRK3-202ENST00000377011 NLRP4Q96MN2 994 aa13.54□□□□□ -0.24
VRK3-202ENST00000377011 RAD9AQ99638 391 aa13.54□□□□□ -0.24
VRK3-202ENST00000377011 THAP9Q9H5L6 903 aa13.54□□□□□ -0.24
VRK3-202ENST00000377011 IFT122Q9HBG6 1241 aa13.54□□□□□ -0.24
VRK3-202ENST00000377011 KIAA1671Q9BY89 1806 aa13.54□□□□□ -0.24
VRK3-202ENST00000377011 MUC3AQ02505 3323 aa13.54□□□□□ -0.24
VRK3-202ENST00000377011 NLRC5Q86WI3 1866 aa13.54□□□□□ -0.24
VRK3-202ENST00000377011 KCNJ18B7U540 433 aa13.53□□□□□ -0.24
VRK3-202ENST00000377011 EIF4BP23588 611 aaKnown RBP13.53□□□□□ -0.24
VRK3-202ENST00000377011 CASP14P31944 242 aa13.53□□□□□ -0.24
VRK3-202ENST00000377011 KCNJ12Q14500 433 aa13.53□□□□□ -0.24
VRK3-202ENST00000377011 PTPN21Q16825 1174 aa13.53□□□□□ -0.24
VRK3-202ENST00000377011 DTHD1Q6ZMT9 781 aa13.53□□□□□ -0.24
VRK3-202ENST00000377011 SRGAP1Q7Z6B7 1085 aa13.53□□□□□ -0.24
VRK3-202ENST00000377011 SP7Q8TDD2 431 aaPredicted RBP13.53□□□□□ -0.24
VRK3-202ENST00000377011 NLRP7Q8WX94 980 aa13.53□□□□□ -0.24
VRK3-202ENST00000377011 MTRQ99707 1265 aa13.53□□□□□ -0.24
VRK3-202ENST00000377011 ADAM2Q99965 735 aa13.53□□□□□ -0.24
VRK3-202ENST00000377011 DESI2Q9BSY9 194 aa13.53□□□□□ -0.24
VRK3-202ENST00000377011 TSPYL2Q9H2G4 693 aaPredicted RBP13.53□□□□□ -0.24
VRK3-202ENST00000377011 PRDM6Q9NQX0 595 aa13.53□□□□□ -0.24
VRK3-202ENST00000377011 ABHD10Q9NUJ1 306 aa13.53□□□□□ -0.24
VRK3-202ENST00000377011 CDC23Q9UJX2 597 aa13.53□□□□□ -0.24
VRK3-202ENST00000377011 STXBP5LQ9Y2K9 1186 aa13.53□□□□□ -0.24
VRK3-202ENST00000377011 ATG2AQ2TAZ0 1938 aa13.53□□□□□ -0.24
VRK3-202ENST00000377011 TMEM265A0A087WTH1 108 aa13.53□□□□□ -0.24
VRK3-202ENST00000377011 CCDC151A5D8V7 595 aa13.53□□□□□ -0.24
VRK3-202ENST00000377011 SRGAP2CP0DJJ0 459 aa13.53□□□□□ -0.24
VRK3-202ENST00000377011 POLGP54098 1239 aaPredicted RBP13.53□□□□□ -0.24
VRK3-202ENST00000377011 FAM102BQ5T8I3 360 aa13.53□□□□□ -0.24
VRK3-202ENST00000377011 CC2D1AQ6P1N0 951 aaPredicted RBP13.53□□□□□ -0.24
VRK3-202ENST00000377011 ZNF662Q6ZS27 426 aa13.53□□□□□ -0.24
VRK3-202ENST00000377011 ADSSL1Q8N142 457 aa13.53□□□□□ -0.24
VRK3-202ENST00000377011 GDPD5Q8WTR4 605 aa13.53□□□□□ -0.24
VRK3-202ENST00000377011 ZNF689Q96CS4 500 aaPredicted RBP13.53□□□□□ -0.24
VRK3-202ENST00000377011 IQCDQ96DY2 449 aa13.53□□□□□ -0.24
VRK3-202ENST00000377011 PNMA5Q96PV4 448 aa13.53□□□□□ -0.24
VRK3-202ENST00000377011 PLIN2Q99541 437 aa13.53□□□□□ -0.24
VRK3-202ENST00000377011 POLR3CQ9BUI4 534 aaPredicted RBP13.53□□□□□ -0.24
VRK3-202ENST00000377011 UBXN6Q9BZV1 441 aa13.53□□□□□ -0.24
VRK3-202ENST00000377011 RNF19AQ9NV58 838 aa13.53□□□□□ -0.24
VRK3-202ENST00000377011 LRWD1Q9UFC0 647 aa13.53□□□□□ -0.24
VRK3-202ENST00000377011 SQORQ9Y6N5 450 aa13.53□□□□□ -0.24
VRK3-202ENST00000377011 FNDC1Q4ZHG4 1894 aaPredicted RBP13.53□□□□□ -0.24
VRK3-202ENST00000377011 C5orf42Q9H799 3197 aa13.52□□□□□ -0.24
VRK3-202ENST00000377011 CTAGE9A4FU28 777 aa13.52□□□□□ -0.25
VRK3-202ENST00000377011 MEIS3P2A8K0S8 358 aa13.52□□□□□ -0.25
VRK3-202ENST00000377011 C9IYK1 514 aa13.52□□□□□ -0.25
VRK3-202ENST00000377011 E9PMD0 336 aa13.52□□□□□ -0.25
VRK3-202ENST00000377011 USO1O60763 962 aaKnown RBP13.52□□□□□ -0.25
VRK3-202ENST00000377011 EFCAB14O75071 495 aa13.52□□□□□ -0.25
VRK3-202ENST00000377011 RHOBTB3O94955 611 aa13.52□□□□□ -0.25
VRK3-202ENST00000377011 FOSL2P15408 326 aa13.52□□□□□ -0.25
VRK3-202ENST00000377011 RPA1P27694 616 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms