RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 ACO1P21399 889 aaKnown RBP10.36□□□□□ -0.75
TRIM39-202ENST00000376659 GTF2H1P32780 548 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 SP2Q02086 613 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 CYP24A1Q07973 514 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 CCDC142Q17RM4 750 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 PEX26Q7Z412 305 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 KIFC3Q9BVG8 833 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 PCIF1Q9H4Z3 704 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 TOPORSQ9NS56 1045 aaPredicted RBP10.36□□□□□ -0.75
TRIM39-202ENST00000376659 TRIM66O15016 1216 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 RTN2O75298 545 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 MMEP08473 750 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 NUDT17P0C025 328 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 SFNP31947 248 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 PTP4A2Q12974 167 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 SNRNP35Q16560 246 aaKnown RBP10.36□□□□□ -0.75
TRIM39-202ENST00000376659 KLHL7Q8IXQ5 586 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 RPUSD2Q8IZ73 545 aaKnown RBP10.36□□□□□ -0.75
TRIM39-202ENST00000376659 SH2D3AQ9BRG2 576 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 MOV10L1Q9BXT6 1211 aaKnown RBP10.36□□□□□ -0.75
TRIM39-202ENST00000376659 RPAP3Q9H6T3 665 aaPredicted RBP10.36□□□□□ -0.75
TRIM39-202ENST00000376659 VEZTQ9HBM0 779 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 UMODL1Q5DID0 1318 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 COL4A4P53420 1690 aaPredicted RBP10.36□□□□□ -0.75
TRIM39-202ENST00000376659 SLC16A4O15374 487 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 DAPK3O43293 454 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 VNN1O95497 513 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 GCLMP48507 274 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 GUCY2FP51841 1108 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 SOX10P56693 466 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 HSP90B2PQ58FF3 399 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 RHBDF2Q6PJF5 856 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 C6orf89Q6UWU4 347 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 HS2ST1Q7LGA3 356 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 FMNL3Q8IVF7 1028 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 RHOT2Q8IXI1 618 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 VTI1AQ96AJ9 217 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 TRIM51Q9BSJ1 452 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 CAPS2Q9BXY5 557 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 TMEM8AQ9HCN3 771 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 UBE2TQ9NPD8 197 aaPredicted RBP10.36□□□□□ -0.75
TRIM39-202ENST00000376659 CEP104O60308 925 aa10.35□□□□□ -0.75
TRIM39-202ENST00000376659 RNASE9P60153 205 aaKnown RBP10.35□□□□□ -0.75
TRIM39-202ENST00000376659 TMEM132BQ14DG7 1078 aa10.35□□□□□ -0.75
TRIM39-202ENST00000376659 NOL9Q5SY16 702 aaKnown RBP10.35□□□□□ -0.75
TRIM39-202ENST00000376659 STXBP4Q6ZWJ1 553 aa10.35□□□□□ -0.75
TRIM39-202ENST00000376659 ATG4CQ96DT6 458 aa10.35□□□□□ -0.75
TRIM39-202ENST00000376659 AAASQ9NRG9 546 aa10.35□□□□□ -0.75
TRIM39-202ENST00000376659 STK32BQ9NY57 414 aa10.35□□□□□ -0.75
TRIM39-202ENST00000376659 ALG6Q9Y672 507 aa10.35□□□□□ -0.75
TRIM39-202ENST00000376659 MCM3APO60318 1980 aa10.35□□□□□ -0.75
TRIM39-202ENST00000376659 TCRBV5S1A1TA0A578 114 aa10.35□□□□□ -0.75
TRIM39-202ENST00000376659 WDR64B1ANS9 1081 aa10.35□□□□□ -0.75
TRIM39-202ENST00000376659 EXOC3O60645 756 aa10.35□□□□□ -0.75
TRIM39-202ENST00000376659 FGGP02679 453 aa10.35□□□□□ -0.75
TRIM39-202ENST00000376659 CYP1A1P04798 512 aaPredicted RBP10.35□□□□□ -0.75
TRIM39-202ENST00000376659 PTPRAP18433 802 aa10.35□□□□□ -0.75
TRIM39-202ENST00000376659 EIF2AK2P19525 551 aaKnown RBP10.35□□□□□ -0.75
TRIM39-202ENST00000376659 RPS12P25398 132 aaKnown RBP10.35□□□□□ -0.75
TRIM39-202ENST00000376659 COPB2P35606 906 aa10.35□□□□□ -0.75
TRIM39-202ENST00000376659 KRT76Q01546 638 aa10.35□□□□□ -0.75
TRIM39-202ENST00000376659 CCDC60Q8IWA6 550 aaPredicted RBP10.35□□□□□ -0.75
TRIM39-202ENST00000376659 POP1Q99575 1024 aaKnown RBP10.35□□□□□ -0.75
TRIM39-202ENST00000376659 GEMIN8Q9NWZ8 242 aaKnown RBP10.35□□□□□ -0.75
TRIM39-202ENST00000376659 SYNGAP1Q96PV0 1343 aa10.35□□□□□ -0.75
TRIM39-202ENST00000376659 ZNF541Q9H0D2 1346 aa10.35□□□□□ -0.75
TRIM39-202ENST00000376659 C5orf60A6NFR6 353 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 SPATA31C2B4DYI2 1134 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 KRIT1O00522 736 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 ABLIM1O14639 778 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 OPA1O60313 960 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 CYP11B1P15538 503 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 IVDP26440 423 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 FSTL1Q12841 308 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 CCDC70Q6NSX1 233 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 CHADLQ6NUI6 762 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 OR2W6PQ8NHA6 318 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 FBXO41Q8TF61 875 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 C17orf75Q9HAS0 396 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 CYP39A1Q9NYL5 469 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 LARSQ9P2J5 1176 aaKnown RBP10.34□□□□□ -0.75
TRIM39-202ENST00000376659 AMFRQ9UKV5 643 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 MAFBQ9Y5Q3 323 aaPredicted RBP10.34□□□□□ -0.75
TRIM39-202ENST00000376659 CNTNAP2Q9UHC6 1331 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 HMGB1P1B2RPK0 211 aaPredicted RBP10.34□□□□□ -0.75
TRIM39-202ENST00000376659 ATMINO43313 823 aaPredicted RBP10.34□□□□□ -0.75
TRIM39-202ENST00000376659 HSF2BPO75031 334 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 PHF2O75151 1096 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 DNA2P51530 1060 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 ZNF132P52740 706 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 BACE1P56817 501 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 CDR2Q01850 454 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 KLF1Q13351 362 aaPredicted RBP10.34□□□□□ -0.75
TRIM39-202ENST00000376659 PTGISQ16647 500 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 CLEC16AQ2KHT3 1053 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 ANKS1BQ7Z6G8 1248 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 NIM1KQ8IY84 436 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 SLC17A8Q8NDX2 589 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 TAS1R2Q8TE23 839 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 LMBR1Q8WVP7 490 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms