RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 ATP2B1P20020 1258 aa16.33■□□□□ 0.2
HDAC6-204ENST00000376643 MCM7P33993 719 aa16.33■□□□□ 0.2
HDAC6-204ENST00000376643 TRAPPC10P48553 1259 aa16.33■□□□□ 0.2
HDAC6-204ENST00000376643 RBM25P49756 843 aaKnown RBP16.33■□□□□ 0.2
HDAC6-204ENST00000376643 SCNN1GP51170 649 aa16.33■□□□□ 0.2
HDAC6-204ENST00000376643 DSG1Q02413 1049 aa16.33■□□□□ 0.2
HDAC6-204ENST00000376643 MAPK6Q16659 721 aa16.33■□□□□ 0.2
HDAC6-204ENST00000376643 AMHR2Q16671 573 aa16.33■□□□□ 0.2
HDAC6-204ENST00000376643 FAM187BQ17R55 369 aa16.33■□□□□ 0.2
HDAC6-204ENST00000376643 USP41Q3LFD5 358 aa16.33■□□□□ 0.2
HDAC6-204ENST00000376643 C12orf76Q8N812 135 aaPredicted RBP16.33■□□□□ 0.2
HDAC6-204ENST00000376643 FAM184AQ8NB25 1140 aa16.33■□□□□ 0.2
HDAC6-204ENST00000376643 PRSS33Q8NF86 280 aa16.33■□□□□ 0.2
HDAC6-204ENST00000376643 PIGOQ8TEQ8 1089 aa16.33■□□□□ 0.2
HDAC6-204ENST00000376643 ZSCAN31Q96LW9 406 aaPredicted RBP16.33■□□□□ 0.2
HDAC6-204ENST00000376643 APOL6Q9BWW8 343 aa16.33■□□□□ 0.2
HDAC6-204ENST00000376643 VN1R3Q9BXE9 311 aa16.33■□□□□ 0.2
HDAC6-204ENST00000376643 RXFP1Q9HBX9 757 aa16.33■□□□□ 0.2
HDAC6-204ENST00000376643 MAN1C1Q9NR34 630 aa16.33■□□□□ 0.2
HDAC6-204ENST00000376643 SH2B1Q9NRF2 756 aaPredicted RBP16.33■□□□□ 0.2
HDAC6-204ENST00000376643 MARCH5Q9NX47 278 aa16.33■□□□□ 0.2
HDAC6-204ENST00000376643 IGSF9Q9P2J2 1179 aa16.33■□□□□ 0.2
HDAC6-204ENST00000376643 PARP2Q9UGN5 583 aa16.33■□□□□ 0.2
HDAC6-204ENST00000376643 PHLPP2Q6ZVD8 1323 aa16.33■□□□□ 0.2
HDAC6-204ENST00000376643 ARHGEF35A5YM69 484 aa16.32■□□□□ 0.2
HDAC6-204ENST00000376643 C2CD2LO14523 706 aa16.32■□□□□ 0.2
HDAC6-204ENST00000376643 JAK2O60674 1132 aa16.32■□□□□ 0.2
HDAC6-204ENST00000376643 SF3B1O75533 1304 aaKnown RBP eCLIP16.32■□□□□ 0.21e-6■■■■■ 66.8
HDAC6-204ENST00000376643 LARGE1O95461 756 aa16.32■□□□□ 0.2
HDAC6-204ENST00000376643 RPA1P27694 616 aa16.32■□□□□ 0.2
HDAC6-204ENST00000376643 ELAVL2Q12926 359 aaKnown RBP16.32■□□□□ 0.2
HDAC6-204ENST00000376643 CDCA2Q69YH5 1023 aaPredicted RBP16.32■□□□□ 0.2
HDAC6-204ENST00000376643 PDXDC1Q6P996 788 aa16.32■□□□□ 0.2
HDAC6-204ENST00000376643 RNF168Q8IYW5 571 aaPredicted RBP16.32■□□□□ 0.2
HDAC6-204ENST00000376643 NXPE3Q969Y0 559 aa16.32■□□□□ 0.2
HDAC6-204ENST00000376643 IFT74Q96LB3 600 aa16.32■□□□□ 0.2
HDAC6-204ENST00000376643 ZDBF2Q9HCK1 2354 aa16.32■□□□□ 0.2
HDAC6-204ENST00000376643 ZDHHC7Q9NXF8 308 aa16.32■□□□□ 0.2
HDAC6-204ENST00000376643 FNIP2Q9P278 1114 aa16.32■□□□□ 0.2
HDAC6-204ENST00000376643 LIMD1Q9UGP4 676 aa16.32■□□□□ 0.2
HDAC6-204ENST00000376643 KIF3AQ9Y496 699 aa16.32■□□□□ 0.2
HDAC6-204ENST00000376643 TEX28O15482 410 aa16.31■□□□□ 0.2
HDAC6-204ENST00000376643 B4GALT3O60512 393 aa16.31■□□□□ 0.2
HDAC6-204ENST00000376643 NPTXRO95502 500 aa16.31■□□□□ 0.2
HDAC6-204ENST00000376643 BRD1O95696 1058 aa16.31■□□□□ 0.2
HDAC6-204ENST00000376643 WEE2P0C1S8 567 aa16.31■□□□□ 0.2
HDAC6-204ENST00000376643 NAMPTP43490 491 aa16.31■□□□□ 0.2
HDAC6-204ENST00000376643 AFF1P51825 1210 aaKnown RBP16.31■□□□□ 0.2
HDAC6-204ENST00000376643 EFNA5P52803 228 aa16.31■□□□□ 0.2
HDAC6-204ENST00000376643 TDGQ13569 410 aa16.31■□□□□ 0.2
HDAC6-204ENST00000376643 KIAA0319Q5VV43 1072 aa16.31■□□□□ 0.2
HDAC6-204ENST00000376643 FUT10Q6P4F1 479 aa16.31■□□□□ 0.2
HDAC6-204ENST00000376643 CATSPER3Q86XQ3 398 aa16.31■□□□□ 0.2
HDAC6-204ENST00000376643 DEPTORQ8TB45 409 aa16.31■□□□□ 0.2
HDAC6-204ENST00000376643 ZFP42Q96MM3 310 aa16.31■□□□□ 0.2
HDAC6-204ENST00000376643 NXF3Q9H4D5 531 aaKnown RBP16.31■□□□□ 0.2
HDAC6-204ENST00000376643 ADAM28Q9UKQ2 775 aa16.31■□□□□ 0.2
HDAC6-204ENST00000376643 HES2Q9Y543 173 aa16.31■□□□□ 0.2
HDAC6-204ENST00000376643 GALR2O43603 387 aaPredicted RBP16.3■□□□□ 0.2
HDAC6-204ENST00000376643 TADA2AO75478 443 aa16.3■□□□□ 0.2
HDAC6-204ENST00000376643 SPATA31C1P0DKV0 1188 aa16.3■□□□□ 0.2
HDAC6-204ENST00000376643 CYP11B2P19099 503 aa16.3■□□□□ 0.2
HDAC6-204ENST00000376643 CLCN5P51795 746 aa16.3■□□□□ 0.2
HDAC6-204ENST00000376643 FOSBP53539 338 aa16.3■□□□□ 0.2
HDAC6-204ENST00000376643 TUSC3Q13454 348 aa16.3■□□□□ 0.2
HDAC6-204ENST00000376643 PRPF4BQ13523 1007 aaKnown RBP16.3■□□□□ 0.2
HDAC6-204ENST00000376643 DCAF4L1Q3SXM0 396 aa16.3■□□□□ 0.2
HDAC6-204ENST00000376643 IER5LQ5T953 404 aa16.3■□□□□ 0.2
HDAC6-204ENST00000376643 PADI6Q6TGC4 694 aa16.3■□□□□ 0.2
HDAC6-204ENST00000376643 KIFAP3Q92845 792 aa16.3■□□□□ 0.2
HDAC6-204ENST00000376643 RNF39Q9H2S5 420 aa16.3■□□□□ 0.2
HDAC6-204ENST00000376643 FZD8Q9H461 694 aa16.3■□□□□ 0.2
HDAC6-204ENST00000376643 WDR6Q9NNW5 1121 aaKnown RBP16.3■□□□□ 0.2
HDAC6-204ENST00000376643 CHST7Q9NS84 486 aa16.3■□□□□ 0.2
HDAC6-204ENST00000376643 CCDC195A0A1B0GUA6 201 aa16.29■□□□□ 0.2
HDAC6-204ENST00000376643 B4GALT5O43286 388 aa16.29■□□□□ 0.2
HDAC6-204ENST00000376643 EFEMP2O95967 443 aa16.29■□□□□ 0.2
HDAC6-204ENST00000376643 THP07101 528 aa16.29■□□□□ 0.2
HDAC6-204ENST00000376643 AKAP5P24588 427 aa16.29■□□□□ 0.2
HDAC6-204ENST00000376643 VCPP55072 806 aaKnown RBP16.29■□□□□ 0.2
HDAC6-204ENST00000376643 TCF15Q12870 199 aa16.29■□□□□ 0.2
HDAC6-204ENST00000376643 HSP90AA2PQ14568 343 aaPredicted RBP16.29■□□□□ 0.2
HDAC6-204ENST00000376643 TTC38Q5R3I4 469 aa16.29■□□□□ 0.2
HDAC6-204ENST00000376643 ASTLQ6HA08 431 aaPredicted RBP16.29■□□□□ 0.2
HDAC6-204ENST00000376643 MAEAQ7L5Y9 396 aa16.29■□□□□ 0.2
HDAC6-204ENST00000376643 NOSTRINQ8IVI9 506 aa16.29■□□□□ 0.2
HDAC6-204ENST00000376643 TMEM60Q9H2L4 133 aa16.29■□□□□ 0.2
HDAC6-204ENST00000376643 PIDD1Q9HB75 910 aa16.29■□□□□ 0.2
HDAC6-204ENST00000376643 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.29■□□□□ 0.2
HDAC6-204ENST00000376643 KCNG1Q9UIX4 513 aa16.29■□□□□ 0.2
HDAC6-204ENST00000376643 CDH22Q9UJ99 828 aa16.29■□□□□ 0.2
HDAC6-204ENST00000376643 DUSP12Q9UNI6 340 aa16.29■□□□□ 0.2
HDAC6-204ENST00000376643 CLUHO75153 1309 aa16.28■□□□□ 0.2
HDAC6-204ENST00000376643 LAD1O00515 517 aa16.28■□□□□ 0.2
HDAC6-204ENST00000376643 ACKR2O00590 384 aa16.28■□□□□ 0.2
HDAC6-204ENST00000376643 MED24O75448 989 aa16.28■□□□□ 0.2
HDAC6-204ENST00000376643 PAPLNO95428 1278 aa16.28■□□□□ 0.2
HDAC6-204ENST00000376643 PRKCBP05771 671 aa16.28■□□□□ 0.2
HDAC6-204ENST00000376643 ASGR2P07307 311 aa16.28■□□□□ 0.2
HDAC6-204ENST00000376643 FXR2P51116 673 aaKnown RBP eCLIP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms