RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 PLS3P13797 630 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 SAT1P21673 171 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 PPP3CAQ08209 521 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 MMS22LQ6ZRQ5 1243 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 RSRC2Q7L4I2 434 aaKnown RBP11.93□□□□□ -0.5
HDAC6-203ENST00000376619 PALB2Q86YC2 1186 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 SIAH1Q8IUQ4 282 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 MDM1Q8TC05 714 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 C9orf72Q96LT7 481 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 ZIM3Q96PE6 472 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 PPP1R9AQ9ULJ8 1098 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 RRP15Q9Y3B9 282 aaKnown RBP11.93□□□□□ -0.5
HDAC6-203ENST00000376619 THSD7AQ9UPZ6 1657 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 SCN11AQ9UI33 1791 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 GRID2IPA4D2P6 1211 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 KRT1P04264 644 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 PBX1P40424 430 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 RGS7P49802 495 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 BASP1P80723 227 aaKnown RBP11.93□□□□□ -0.5
HDAC6-203ENST00000376619 NAB2Q15742 525 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 MAPK6Q16659 721 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 SPDYE2Q495Y8 402 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 GLRA4Q5JXX5 417 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 CYP4A22Q5TCH4 519 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 OR6B2Q6IFH4 312 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 ARHGEF26Q96DR7 871 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 KCNMB3Q9NPA1 279 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 RAB20Q9NX57 234 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 HEY1Q9Y5J3 304 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 GNA15P30679 374 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 BACE1P56817 501 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 DNAJC24Q6P3W2 148 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 CCDC137Q6PK04 289 aaKnown RBP11.93□□□□□ -0.5
HDAC6-203ENST00000376619 FBXO16Q8IX29 292 aaPredicted RBP11.93□□□□□ -0.5
HDAC6-203ENST00000376619 STK33Q9BYT3 514 aa11.93□□□□□ -0.5
HDAC6-203ENST00000376619 DBR1Q9UK59 544 aaKnown RBP11.93□□□□□ -0.5
HDAC6-203ENST00000376619 SSU72P8A0A1W2PR75 194 aa11.92□□□□□ -0.5
HDAC6-203ENST00000376619 DDX3XO00571 662 aaKnown RBP eCLIP11.92□□□□□ -0.51e-8■■■■□ 23.1
HDAC6-203ENST00000376619 TLR3O15455 904 aaKnown RBP11.92□□□□□ -0.5
HDAC6-203ENST00000376619 ATF2P15336 505 aa11.92□□□□□ -0.5
HDAC6-203ENST00000376619 YBX3P16989 372 aaKnown RBP eCLIP11.92□□□□□ -0.59e-6■■■□□ 18.1
HDAC6-203ENST00000376619 KCNT1Q5JUK3 1230 aa11.92□□□□□ -0.5
HDAC6-203ENST00000376619 FAM47EQ6ZV65 393 aa11.92□□□□□ -0.5
HDAC6-203ENST00000376619 ETNPPLQ8TBG4 499 aa11.92□□□□□ -0.5
HDAC6-203ENST00000376619 RSAD2Q8WXG1 361 aa11.92□□□□□ -0.5
HDAC6-203ENST00000376619 RFFLQ8WZ73 363 aa11.92□□□□□ -0.5
HDAC6-203ENST00000376619 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.92□□□□□ -0.56e-7■■□□□ 14.2
HDAC6-203ENST00000376619 WRAP73Q9P2S5 460 aaPredicted RBP11.92□□□□□ -0.5
HDAC6-203ENST00000376619 MAD1L1Q9Y6D9 718 aa11.92□□□□□ -0.5
HDAC6-203ENST00000376619 CRYBG1Q9Y4K1 1723 aa11.92□□□□□ -0.5
HDAC6-203ENST00000376619 H7C0C1 242 aa11.92□□□□□ -0.5
HDAC6-203ENST00000376619 ATP2A1O14983 1001 aa11.92□□□□□ -0.5
HDAC6-203ENST00000376619 TBX3O15119 743 aa11.92□□□□□ -0.5
HDAC6-203ENST00000376619 ATP5OP48047 213 aa11.92□□□□□ -0.5
HDAC6-203ENST00000376619 JAK3P52333 1124 aa11.92□□□□□ -0.5
HDAC6-203ENST00000376619 RNF10Q8N5U6 811 aaKnown RBP11.92□□□□□ -0.5
HDAC6-203ENST00000376619 COPS5Q92905 334 aa11.92□□□□□ -0.5
HDAC6-203ENST00000376619 C18orf8Q96DM3 657 aa11.92□□□□□ -0.5
HDAC6-203ENST00000376619 TACO1Q9BSH4 297 aaKnown RBP11.92□□□□□ -0.5
HDAC6-203ENST00000376619 ALG13Q9NP73 1137 aaKnown RBP11.92□□□□□ -0.5
HDAC6-203ENST00000376619 SAMD15Q9P1V8 674 aa11.92□□□□□ -0.5
HDAC6-203ENST00000376619 HPCAL4Q9UM19 191 aa11.92□□□□□ -0.5
HDAC6-203ENST00000376619 MYH13Q9UKX3 1938 aa11.92□□□□□ -0.5
HDAC6-203ENST00000376619 STAM2O75886 525 aa11.92□□□□□ -0.5
HDAC6-203ENST00000376619 PPP2R5CQ13362 524 aa11.92□□□□□ -0.5
HDAC6-203ENST00000376619 MICALCLQ6ZW33 695 aa11.92□□□□□ -0.5
HDAC6-203ENST00000376619 PRUNE1Q86TP1 453 aa11.92□□□□□ -0.5
HDAC6-203ENST00000376619 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.92□□□□□ -0.5
HDAC6-203ENST00000376619 TRPM4Q8TD43 1214 aa11.92□□□□□ -0.5
HDAC6-203ENST00000376619 NKIRAS1Q9NYS0 192 aa11.92□□□□□ -0.5
HDAC6-203ENST00000376619 ECEL1O95672 775 aa11.91□□□□□ -0.5
HDAC6-203ENST00000376619 KRT10P13645 584 aa11.91□□□□□ -0.5
HDAC6-203ENST00000376619 RWDD2BP57060 319 aa11.91□□□□□ -0.5
HDAC6-203ENST00000376619 BBS9Q3SYG4 887 aa11.91□□□□□ -0.5
HDAC6-203ENST00000376619 SV2AQ7L0J3 742 aa11.91□□□□□ -0.5
HDAC6-203ENST00000376619 ZC3H18Q86VM9 953 aaKnown RBP11.91□□□□□ -0.5
HDAC6-203ENST00000376619 MCPH1Q8NEM0 835 aa11.91□□□□□ -0.5
HDAC6-203ENST00000376619 MOV10L1Q9BXT6 1211 aaKnown RBP11.91□□□□□ -0.5
HDAC6-203ENST00000376619 C10orf88Q9H8K7 445 aa11.91□□□□□ -0.5
HDAC6-203ENST00000376619 PCNTO95613 3336 aa11.91□□□□□ -0.5
HDAC6-203ENST00000376619 ZRANB2O95218 330 aaKnown RBP eCLIP11.91□□□□□ -0.5
HDAC6-203ENST00000376619 CYP2C8P10632 490 aa11.91□□□□□ -0.5
HDAC6-203ENST00000376619 MARCKSL1P49006 195 aa11.91□□□□□ -0.5
HDAC6-203ENST00000376619 ITGB3BPQ13352 177 aaPredicted RBP11.91□□□□□ -0.5
HDAC6-203ENST00000376619 FAM160B1Q5W0V3 765 aa11.91□□□□□ -0.5
HDAC6-203ENST00000376619 CREG2Q8IUH2 290 aa11.91□□□□□ -0.5
HDAC6-203ENST00000376619 CASKIN2Q8WXE0 1202 aa11.91□□□□□ -0.5
HDAC6-203ENST00000376619 PSPC1Q8WXF1 523 aaKnown RBP11.91□□□□□ -0.5
HDAC6-203ENST00000376619 BAP1Q92560 729 aa11.91□□□□□ -0.5
HDAC6-203ENST00000376619 POLR3CQ9BUI4 534 aaPredicted RBP11.91□□□□□ -0.5
HDAC6-203ENST00000376619 TBX20Q9UMR3 447 aa11.91□□□□□ -0.5
HDAC6-203ENST00000376619 TGFB1I1O43294 461 aa11.91□□□□□ -0.5
HDAC6-203ENST00000376619 HLA-DRAP01903 254 aa11.91□□□□□ -0.5
HDAC6-203ENST00000376619 STX2P32856 288 aa11.91□□□□□ -0.5
HDAC6-203ENST00000376619 CIITAP33076 1130 aa11.91□□□□□ -0.5
HDAC6-203ENST00000376619 ORC2Q13416 577 aaPredicted RBP11.91□□□□□ -0.5
HDAC6-203ENST00000376619 EMC2Q15006 297 aa11.91□□□□□ -0.5
HDAC6-203ENST00000376619 PGM5Q15124 567 aa11.91□□□□□ -0.5
HDAC6-203ENST00000376619 TMED2Q15363 201 aa11.91□□□□□ -0.5
HDAC6-203ENST00000376619 PHLDB3Q6NSJ2 640 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms