RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 ZRSR2Q15696 482 aaKnown RBP13.03□□□□□ -0.32
C9orf3-203ENST00000375315 ANKRD40Q6AI12 368 aa13.03□□□□□ -0.32
C9orf3-203ENST00000375315 KRT25Q7Z3Z0 450 aa13.03□□□□□ -0.32
C9orf3-203ENST00000375315 TRIM42Q8IWZ5 723 aa13.03□□□□□ -0.32
C9orf3-203ENST00000375315 AGGF1Q8N302 714 aaeCLIP13.03□□□□□ -0.325e-11■■■■■ 61.5
C9orf3-203ENST00000375315 AMNQ9BXJ7 453 aa13.03□□□□□ -0.32
C9orf3-203ENST00000375315 VPS33BQ9H267 617 aa13.03□□□□□ -0.32
C9orf3-203ENST00000375315 DPH5Q9H2P9 285 aa13.03□□□□□ -0.32
C9orf3-203ENST00000375315 LRRC4CQ9HCJ2 640 aa13.03□□□□□ -0.32
C9orf3-203ENST00000375315 FGFR1OP2Q9NVK5 253 aa13.03□□□□□ -0.32
C9orf3-203ENST00000375315 AMACRQ9UHK6 382 aa13.03□□□□□ -0.32
C9orf3-203ENST00000375315 QSER1Q2KHR3 1735 aa13.03□□□□□ -0.32
C9orf3-203ENST00000375315 SMIM23A6NLE4 172 aa13.03□□□□□ -0.32
C9orf3-203ENST00000375315 SKIP12755 728 aa13.03□□□□□ -0.32
C9orf3-203ENST00000375315 ALAS1P13196 640 aa13.03□□□□□ -0.32
C9orf3-203ENST00000375315 DESP17661 470 aa13.03□□□□□ -0.32
C9orf3-203ENST00000375315 ZNF76P36508 570 aa13.03□□□□□ -0.32
C9orf3-203ENST00000375315 DPY19L2Q6NUT2 758 aa13.03□□□□□ -0.32
C9orf3-203ENST00000375315 FITM2Q8N6M3 262 aa13.03□□□□□ -0.32
C9orf3-203ENST00000375315 ENDOVQ8N8Q3 282 aaKnown RBP13.03□□□□□ -0.32
C9orf3-203ENST00000375315 SLC17A8Q8NDX2 589 aa13.03□□□□□ -0.32
C9orf3-203ENST00000375315 CYP2W1Q8TAV3 490 aa13.03□□□□□ -0.32
C9orf3-203ENST00000375315 DCAF4Q8WV16 495 aa13.03□□□□□ -0.32
C9orf3-203ENST00000375315 MKL1Q969V6 931 aa13.03□□□□□ -0.32
C9orf3-203ENST00000375315 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.03□□□□□ -0.327e-7■■■□□ 15.2
C9orf3-203ENST00000375315 CCDC113Q9H0I3 377 aa13.03□□□□□ -0.32
C9orf3-203ENST00000375315 RAVER2Q9HCJ3 691 aaKnown RBP13.03□□□□□ -0.32
C9orf3-203ENST00000375315 SH3GLB2Q9NR46 395 aa13.03□□□□□ -0.32
C9orf3-203ENST00000375315 KLHL14Q9P2G3 628 aa13.03□□□□□ -0.32
C9orf3-203ENST00000375315 TMX2Q9Y320 296 aa13.03□□□□□ -0.32
C9orf3-203ENST00000375315 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.03□□□□□ -0.32
C9orf3-203ENST00000375315 NVLO15381 856 aaKnown RBP13.02□□□□□ -0.32
C9orf3-203ENST00000375315 PTDSS1P48651 473 aaKnown RBP13.02□□□□□ -0.32
C9orf3-203ENST00000375315 CNGA2Q16280 664 aa13.02□□□□□ -0.32
C9orf3-203ENST00000375315 PABPC1LQ4VXU2 614 aaKnown RBP13.02□□□□□ -0.32
C9orf3-203ENST00000375315 DDX23Q9BUQ8 820 aaKnown RBP13.02□□□□□ -0.32
C9orf3-203ENST00000375315 PABPC3Q9H361 631 aaKnown RBP13.02□□□□□ -0.32
C9orf3-203ENST00000375315 PICK1Q9NRD5 415 aa13.02□□□□□ -0.32
C9orf3-203ENST00000375315 DISC1Q9NRI5 854 aa13.02□□□□□ -0.32
C9orf3-203ENST00000375315 GALNT8Q9NY28 637 aa13.02□□□□□ -0.32
C9orf3-203ENST00000375315 TCP11X1B4DZS4 312 aa13.02□□□□□ -0.33
C9orf3-203ENST00000375315 LMNAP02545 664 aaKnown RBP13.02□□□□□ -0.33
C9orf3-203ENST00000375315 GSTT1P30711 240 aa13.02□□□□□ -0.33
C9orf3-203ENST00000375315 USP11P51784 963 aa13.02□□□□□ -0.33
C9orf3-203ENST00000375315 SH3BGRP55822 239 aaPredicted RBP13.02□□□□□ -0.33
C9orf3-203ENST00000375315 PRR16Q569H4 304 aa13.02□□□□□ -0.33
C9orf3-203ENST00000375315 GPC2Q8N158 579 aa13.02□□□□□ -0.33
C9orf3-203ENST00000375315 PROCA1Q8NCQ7 364 aaPredicted RBP13.02□□□□□ -0.33
C9orf3-203ENST00000375315 SEC14L1Q92503 715 aa13.02□□□□□ -0.33
C9orf3-203ENST00000375315 BAP1Q92560 729 aa13.02□□□□□ -0.33
C9orf3-203ENST00000375315 ZBED3Q96IU2 234 aaPredicted RBP13.02□□□□□ -0.33
C9orf3-203ENST00000375315 P2RX7Q99572 595 aaKnown RBP13.02□□□□□ -0.33
C9orf3-203ENST00000375315 NOC2LQ9Y3T9 749 aaKnown RBP13.02□□□□□ -0.33
C9orf3-203ENST00000375315 PLIN4Q96Q06 1357 aa13.02□□□□□ -0.33
C9orf3-203ENST00000375315 TTI1O43156 1089 aa13.02□□□□□ -0.33
C9orf3-203ENST00000375315 KLRC4O43908 158 aa13.02□□□□□ -0.33
C9orf3-203ENST00000375315 SERPING1P05155 500 aa13.02□□□□□ -0.33
C9orf3-203ENST00000375315 NOVP48745 357 aa13.02□□□□□ -0.33
C9orf3-203ENST00000375315 PMS2P54278 862 aa13.02□□□□□ -0.33
C9orf3-203ENST00000375315 IFI35P80217 286 aaPredicted RBP13.02□□□□□ -0.33
C9orf3-203ENST00000375315 SULF1Q8IWU6 871 aa13.02□□□□□ -0.33
C9orf3-203ENST00000375315 FAM136AQ96C01 138 aa13.02□□□□□ -0.33
C9orf3-203ENST00000375315 PDP2Q9P2J9 529 aa13.02□□□□□ -0.33
C9orf3-203ENST00000375315 CETN3O15182 167 aa13.01□□□□□ -0.33
C9orf3-203ENST00000375315 SORBS3O60504 671 aa13.01□□□□□ -0.33
C9orf3-203ENST00000375315 ATP6V1G1O75348 118 aa13.01□□□□□ -0.33
C9orf3-203ENST00000375315 NPM3O75607 178 aaKnown RBP13.01□□□□□ -0.33
C9orf3-203ENST00000375315 TRAPPC10P48553 1259 aa13.01□□□□□ -0.33
C9orf3-203ENST00000375315 SERPINB4P48594 390 aa13.01□□□□□ -0.33
C9orf3-203ENST00000375315 CALCRLQ16602 461 aa13.01□□□□□ -0.33
C9orf3-203ENST00000375315 MAN2A1Q16706 1144 aa13.01□□□□□ -0.33
C9orf3-203ENST00000375315 WASHC2DQ5SRD0 308 aa13.01□□□□□ -0.33
C9orf3-203ENST00000375315 MTMR14Q8NCE2 650 aa13.01□□□□□ -0.33
C9orf3-203ENST00000375315 SH3TC2Q8TF17 1288 aa13.01□□□□□ -0.33
C9orf3-203ENST00000375315 WNK4Q96J92 1243 aa13.01□□□□□ -0.33
C9orf3-203ENST00000375315 TIPINQ9BVW5 301 aa13.01□□□□□ -0.33
C9orf3-203ENST00000375315 TXLNGYQ9BZA5 131 aa13.01□□□□□ -0.33
C9orf3-203ENST00000375315 STOML1Q9UBI4 398 aa13.01□□□□□ -0.33
C9orf3-203ENST00000375315 POTEIP0CG38 1075 aa13.01□□□□□ -0.33
C9orf3-203ENST00000375315 POTEJP0CG39 1038 aa13.01□□□□□ -0.33
C9orf3-203ENST00000375315 STAT3P40763 770 aa13.01□□□□□ -0.33
C9orf3-203ENST00000375315 CACNA2D1P54289 1103 aa13.01□□□□□ -0.33
C9orf3-203ENST00000375315 RCN2Q14257 317 aa13.01□□□□□ -0.33
C9orf3-203ENST00000375315 SFMBT2Q5VUG0 894 aa13.01□□□□□ -0.33
C9orf3-203ENST00000375315 ARL6IP4Q66PJ3 421 aaKnown RBP13.01□□□□□ -0.33
C9orf3-203ENST00000375315 HGSNATQ68CP4 663 aa13.01□□□□□ -0.33
C9orf3-203ENST00000375315 ZNF365Q70YC5 407 aa13.01□□□□□ -0.33
C9orf3-203ENST00000375315 PTPRN2Q92932 1015 aa13.01□□□□□ -0.33
C9orf3-203ENST00000375315 DCPSQ96C86 337 aaKnown RBP13.01□□□□□ -0.33
C9orf3-203ENST00000375315 NAP1L3Q99457 506 aaPredicted RBP13.01□□□□□ -0.33
C9orf3-203ENST00000375315 SLC4A7Q9Y6M7 1214 aa13.01□□□□□ -0.33
C9orf3-203ENST00000375315 MAGEA13PA6NCF6 341 aa13□□□□□ -0.33
C9orf3-203ENST00000375315 M0R2N6 131 aa13□□□□□ -0.33
C9orf3-203ENST00000375315 CHMP2AO43633 222 aa13□□□□□ -0.33
C9orf3-203ENST00000375315 CCDC15Q0P6D6 951 aa13□□□□□ -0.33
C9orf3-203ENST00000375315 RASIP1Q5U651 963 aa13□□□□□ -0.33
C9orf3-203ENST00000375315 NSMFQ6X4W1 530 aa13□□□□□ -0.33
C9orf3-203ENST00000375315 INTS8Q75QN2 995 aaKnown RBP13□□□□□ -0.33
C9orf3-203ENST00000375315 UCMAQ8WVF2 138 aa13□□□□□ -0.33
C9orf3-203ENST00000375315 UTP4Q969X6 686 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms