RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 EEF2P13639 858 aaKnown RBP22.67■■□□□ 1.22
UPF3A-202ENST00000375299 ZNF76P36508 570 aa22.67■■□□□ 1.22
UPF3A-202ENST00000375299 SNAP25P60880 206 aa22.67■■□□□ 1.22
UPF3A-202ENST00000375299 USH1GQ495M9 461 aa22.67■■□□□ 1.22
UPF3A-202ENST00000375299 ARHGEF19Q8IW93 802 aa22.67■■□□□ 1.22
UPF3A-202ENST00000375299 TPH2Q8IWU9 490 aa22.67■■□□□ 1.22
UPF3A-202ENST00000375299 DYDC2Q96IM9 177 aa22.67■■□□□ 1.22
UPF3A-202ENST00000375299 ZNF570Q96NI8 536 aa22.67■■□□□ 1.22
UPF3A-202ENST00000375299 LRRC19Q9H756 370 aa22.67■■□□□ 1.22
UPF3A-202ENST00000375299 PRKAG3Q9UGI9 489 aa22.67■■□□□ 1.22
UPF3A-202ENST00000375299 PNMA3Q9UL41 463 aa22.67■■□□□ 1.22
UPF3A-202ENST00000375299 A8MUI8 341 aa22.67■■□□□ 1.22
UPF3A-202ENST00000375299 DIAPH2O60879 1101 aa22.67■■□□□ 1.22
UPF3A-202ENST00000375299 SLURP2P0DP57 97 aa22.67■■□□□ 1.22
UPF3A-202ENST00000375299 BZW1Q7L1Q6 419 aaKnown RBP22.67■■□□□ 1.22
UPF3A-202ENST00000375299 ASRGL1Q7L266 308 aa22.67■■□□□ 1.22
UPF3A-202ENST00000375299 CERS5Q8N5B7 392 aa22.67■■□□□ 1.22
UPF3A-202ENST00000375299 MKL1Q969V6 931 aa22.67■■□□□ 1.22
UPF3A-202ENST00000375299 KCNK9Q9NPC2 374 aa22.67■■□□□ 1.22
UPF3A-202ENST00000375299 SPOPO43791 374 aa22.66■■□□□ 1.22
UPF3A-202ENST00000375299 SLITRK3O94933 977 aa22.66■■□□□ 1.22
UPF3A-202ENST00000375299 MSH2P43246 934 aa22.66■■□□□ 1.22
UPF3A-202ENST00000375299 FBXO11Q86XK2 927 aa22.66■■□□□ 1.22
UPF3A-202ENST00000375299 SLC9A9Q8IVB4 645 aa22.66■■□□□ 1.22
UPF3A-202ENST00000375299 FITM2Q8N6M3 262 aa22.66■■□□□ 1.22
UPF3A-202ENST00000375299 RDH13Q8NBN7 331 aa22.66■■□□□ 1.22
UPF3A-202ENST00000375299 SLCO2A1Q92959 643 aa22.66■■□□□ 1.22
UPF3A-202ENST00000375299 POP1Q99575 1024 aaKnown RBP22.66■■□□□ 1.22
UPF3A-202ENST00000375299 MLXIPLQ9NP71 852 aa22.66■■□□□ 1.22
UPF3A-202ENST00000375299 SUGT1Q9Y2Z0 365 aa22.66■■□□□ 1.22
UPF3A-202ENST00000375299 LRRC37AA6NMS7 1700 aa22.66■■□□□ 1.22
UPF3A-202ENST00000375299 TP73O15350 636 aa22.65■■□□□ 1.22
UPF3A-202ENST00000375299 ATMINO43313 823 aaPredicted RBP22.65■■□□□ 1.22
UPF3A-202ENST00000375299 MKRN3Q13064 507 aaKnown RBP22.65■■□□□ 1.22
UPF3A-202ENST00000375299 RHBDF2Q6PJF5 856 aa22.65■■□□□ 1.22
UPF3A-202ENST00000375299 CPNE8Q86YQ8 564 aa22.65■■□□□ 1.22
UPF3A-202ENST00000375299 PCDHB18PQ96TA0 734 aa22.65■■□□□ 1.22
UPF3A-202ENST00000375299 CTNNAL1Q9UBT7 734 aa22.65■■□□□ 1.22
UPF3A-202ENST00000375299 STK38LQ9Y2H1 464 aa22.65■■□□□ 1.22
UPF3A-202ENST00000375299 SPATA31A6Q5VVP1 1343 aa22.65■■□□□ 1.22
UPF3A-202ENST00000375299 EMSYQ7Z589 1322 aa22.65■■□□□ 1.22
UPF3A-202ENST00000375299 RBBP6Q7Z6E9 1792 aaKnown RBP22.65■■□□□ 1.22
UPF3A-202ENST00000375299 CLGNO14967 610 aa22.65■■□□□ 1.22
UPF3A-202ENST00000375299 CYP3A4P08684 503 aa22.65■■□□□ 1.22
UPF3A-202ENST00000375299 KRT17Q04695 432 aa22.65■■□□□ 1.22
UPF3A-202ENST00000375299 GDAP1Q8TB36 358 aa22.65■■□□□ 1.22
UPF3A-202ENST00000375299 ZNF564Q8TBZ8 553 aaPredicted RBP22.65■■□□□ 1.22
UPF3A-202ENST00000375299 COA1Q9GZY4 146 aa22.65■■□□□ 1.22
UPF3A-202ENST00000375299 ZBTB39O15060 712 aa22.64■■□□□ 1.22
UPF3A-202ENST00000375299 CHKAP35790 457 aa22.64■■□□□ 1.22
UPF3A-202ENST00000375299 RWDD2BP57060 319 aa22.64■■□□□ 1.22
UPF3A-202ENST00000375299 LACTBP83111 547 aaPredicted RBP22.64■■□□□ 1.22
UPF3A-202ENST00000375299 EP400NLQ6ZTU2 488 aa22.64■■□□□ 1.22
UPF3A-202ENST00000375299 SPICE1Q8N0Z3 855 aa22.64■■□□□ 1.22
UPF3A-202ENST00000375299 NYAP2Q9P242 653 aa22.64■■□□□ 1.22
UPF3A-202ENST00000375299 ADAMTSL1Q8N6G6 1762 aa22.64■■□□□ 1.21
UPF3A-202ENST00000375299 IGLV3-22A0A075B6J6 115 aa22.64■■□□□ 1.21
UPF3A-202ENST00000375299 KLRG2A4D1S0 409 aaPredicted RBP22.64■■□□□ 1.21
UPF3A-202ENST00000375299 TULP1O00294 542 aaPredicted RBP22.64■■□□□ 1.21
UPF3A-202ENST00000375299 PPEF1O14829 653 aaPredicted RBP22.64■■□□□ 1.21
UPF3A-202ENST00000375299 DLATP10515 647 aaKnown RBP22.64■■□□□ 1.21
UPF3A-202ENST00000375299 BRAFP15056 766 aa22.64■■□□□ 1.21
UPF3A-202ENST00000375299 PDE6BP35913 854 aa22.64■■□□□ 1.21
UPF3A-202ENST00000375299 DLG4P78352 724 aa22.64■■□□□ 1.21
UPF3A-202ENST00000375299 ZKSCAN8Q15776 578 aaPredicted RBP22.64■■□□□ 1.21
UPF3A-202ENST00000375299 ODR4Q5SWX8 454 aa22.64■■□□□ 1.21
UPF3A-202ENST00000375299 OTOP1Q7RTM1 612 aa22.64■■□□□ 1.21
UPF3A-202ENST00000375299 ERICH1Q86X53 443 aa22.64■■□□□ 1.21
UPF3A-202ENST00000375299 SP8Q8IXZ3 490 aa22.64■■□□□ 1.21
UPF3A-202ENST00000375299 CNKSR1Q969H4 720 aa22.64■■□□□ 1.21
UPF3A-202ENST00000375299 BTBD6Q96KE9 485 aa22.64■■□□□ 1.21
UPF3A-202ENST00000375299 RMDN2Q96LZ7 410 aa22.64■■□□□ 1.21
UPF3A-202ENST00000375299 TGS1Q96RS0 853 aaKnown RBP22.64■■□□□ 1.21
UPF3A-202ENST00000375299 NUP85Q9BW27 656 aa22.64■■□□□ 1.21
UPF3A-202ENST00000375299 MOV10L1Q9BXT6 1211 aaKnown RBP22.64■■□□□ 1.21
UPF3A-202ENST00000375299 SLC5A4Q9NY91 659 aa22.64■■□□□ 1.21
UPF3A-202ENST00000375299 CHMP2AO43633 222 aa22.63■■□□□ 1.21
UPF3A-202ENST00000375299 GZMAP12544 262 aa22.63■■□□□ 1.21
UPF3A-202ENST00000375299 CHRNB2P17787 502 aa22.63■■□□□ 1.21
UPF3A-202ENST00000375299 HOXA13P31271 388 aaPredicted RBP22.63■■□□□ 1.21
UPF3A-202ENST00000375299 CETN1Q12798 172 aa22.63■■□□□ 1.21
UPF3A-202ENST00000375299 RNF43Q68DV7 783 aa22.63■■□□□ 1.21
UPF3A-202ENST00000375299 SLC30A10Q6XR72 485 aa22.63■■□□□ 1.21
UPF3A-202ENST00000375299 SYCP3Q8IZU3 236 aa22.63■■□□□ 1.21
UPF3A-202ENST00000375299 TRIM7Q9C029 511 aa22.63■■□□□ 1.21
UPF3A-202ENST00000375299 BCS1LQ9Y276 419 aa22.63■■□□□ 1.21
UPF3A-202ENST00000375299 SGPL1O95470 568 aa22.63■■□□□ 1.21
UPF3A-202ENST00000375299 TTC4O95801 387 aa22.63■■□□□ 1.21
UPF3A-202ENST00000375299 GH1P01241 217 aa22.63■■□□□ 1.21
UPF3A-202ENST00000375299 CCNB1P14635 433 aa22.63■■□□□ 1.21
UPF3A-202ENST00000375299 TAL1P17542 331 aaPredicted RBP22.63■■□□□ 1.21
UPF3A-202ENST00000375299 ITIH2P19823 946 aa22.63■■□□□ 1.21
UPF3A-202ENST00000375299 SKIV2L2P42285 1042 aaKnown RBP22.63■■□□□ 1.21
UPF3A-202ENST00000375299 ATP11AP98196 1134 aa22.63■■□□□ 1.21
UPF3A-202ENST00000375299 MPP2Q14168 576 aa22.63■■□□□ 1.21
UPF3A-202ENST00000375299 MYBPC2Q14324 1141 aa22.63■■□□□ 1.21
UPF3A-202ENST00000375299 EPC2Q52LR7 807 aa22.63■■□□□ 1.21
UPF3A-202ENST00000375299 CGB2Q6NT52 195 aa22.63■■□□□ 1.21
UPF3A-202ENST00000375299 EPS8L1Q8TE68 723 aa22.63■■□□□ 1.21
UPF3A-202ENST00000375299 ASIC3Q9UHC3 531 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms