RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 CDT1Q9H211 546 aa18.78■□□□□ 0.6
HLA-DMA-201ENST00000374843 SQORQ9Y6N5 450 aa18.78■□□□□ 0.6
HLA-DMA-201ENST00000374843 DNAH12Q6ZR08 3092 aa18.77■□□□□ 0.6
HLA-DMA-201ENST00000374843 A0A1B0GUA9 196 aa18.77■□□□□ 0.6
HLA-DMA-201ENST00000374843 OGTO15294 1046 aa18.77■□□□□ 0.6
HLA-DMA-201ENST00000374843 LDHAP00338 332 aaKnown RBP18.77■□□□□ 0.6
HLA-DMA-201ENST00000374843 MCF2P10911 925 aa18.77■□□□□ 0.6
HLA-DMA-201ENST00000374843 PRKCSHP14314 528 aaPredicted RBP18.77■□□□□ 0.6
HLA-DMA-201ENST00000374843 HOXA11P31270 313 aaPredicted RBP18.77■□□□□ 0.6
HLA-DMA-201ENST00000374843 THPOP40225 353 aa18.77■□□□□ 0.6
HLA-DMA-201ENST00000374843 CCDC173Q0VFZ6 552 aa18.77■□□□□ 0.6
HLA-DMA-201ENST00000374843 BFSP1Q12934 665 aa18.77■□□□□ 0.6
HLA-DMA-201ENST00000374843 ZNF568Q3ZCX4 644 aa18.77■□□□□ 0.6
HLA-DMA-201ENST00000374843 TRAF7Q6Q0C0 670 aa18.77■□□□□ 0.6
HLA-DMA-201ENST00000374843 CATSPER4Q7RTX7 472 aa18.77■□□□□ 0.6
HLA-DMA-201ENST00000374843 FAM228AQ86W67 206 aa18.77■□□□□ 0.6
HLA-DMA-201ENST00000374843 CBWD2Q8IUF1 395 aa18.77■□□□□ 0.6
HLA-DMA-201ENST00000374843 ZSWIM2Q8NEG5 633 aa18.77■□□□□ 0.6
HLA-DMA-201ENST00000374843 SLC35C1Q96A29 364 aa18.77■□□□□ 0.6
HLA-DMA-201ENST00000374843 SAAL1Q96ER3 474 aa18.77■□□□□ 0.6
HLA-DMA-201ENST00000374843 MFSD14AQ96MC6 490 aa18.77■□□□□ 0.6
HLA-DMA-201ENST00000374843 PPP1R9BQ96SB3 815 aa18.77■□□□□ 0.6
HLA-DMA-201ENST00000374843 NOC4LQ9BVI4 516 aaKnown RBP18.77■□□□□ 0.6
HLA-DMA-201ENST00000374843 VPS16Q9H269 839 aa18.77■□□□□ 0.6
HLA-DMA-201ENST00000374843 GINS2Q9Y248 185 aa18.77■□□□□ 0.6
HLA-DMA-201ENST00000374843 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.77■□□□□ 0.6
HLA-DMA-201ENST00000374843 CTSHP09668 335 aa18.76■□□□□ 0.59
HLA-DMA-201ENST00000374843 POU5F1Q01860 360 aaKnown RBP18.76■□□□□ 0.59
HLA-DMA-201ENST00000374843 CYP24A1Q07973 514 aa18.76■□□□□ 0.59
HLA-DMA-201ENST00000374843 DCAF4L1Q3SXM0 396 aa18.76■□□□□ 0.59
HLA-DMA-201ENST00000374843 NOTUMQ6P988 496 aa18.76■□□□□ 0.59
HLA-DMA-201ENST00000374843 CRELD2Q6UXH1 353 aaPredicted RBP18.76■□□□□ 0.59
HLA-DMA-201ENST00000374843 VSTM4Q8IW00 320 aa18.76■□□□□ 0.59
HLA-DMA-201ENST00000374843 CCDC155Q8N6L0 562 aa18.76■□□□□ 0.59
HLA-DMA-201ENST00000374843 TMC2Q8TDI7 906 aa18.76■□□□□ 0.59
HLA-DMA-201ENST00000374843 TOX2Q96NM4 488 aa18.76■□□□□ 0.59
HLA-DMA-201ENST00000374843 NDST4Q9H3R1 872 aa18.76■□□□□ 0.59
HLA-DMA-201ENST00000374843 ITIH6Q6UXX5 1313 aa18.75■□□□□ 0.59
HLA-DMA-201ENST00000374843 A0A1W2PQC6 194 aa18.75■□□□□ 0.59
HLA-DMA-201ENST00000374843 GOLGA8IPA6NC78 632 aa18.75■□□□□ 0.59
HLA-DMA-201ENST00000374843 GOLGA8JA6NMD2 632 aa18.75■□□□□ 0.59
HLA-DMA-201ENST00000374843 CKBP12277 381 aa18.75■□□□□ 0.59
HLA-DMA-201ENST00000374843 KRT13P13646 458 aa18.75■□□□□ 0.59
HLA-DMA-201ENST00000374843 FGFR4P22455 802 aa18.75■□□□□ 0.59
HLA-DMA-201ENST00000374843 NCBP1Q09161 790 aaKnown RBP18.75■□□□□ 0.59
HLA-DMA-201ENST00000374843 KYAT1Q16773 422 aa18.75■□□□□ 0.59
HLA-DMA-201ENST00000374843 FBXO47Q5MNV8 452 aa18.75■□□□□ 0.59
HLA-DMA-201ENST00000374843 SLC39A5Q6ZMH5 540 aa18.75■□□□□ 0.59
HLA-DMA-201ENST00000374843 APBB1IPQ7Z5R6 666 aaPredicted RBP18.75■□□□□ 0.59
HLA-DMA-201ENST00000374843 BRSK2Q8IWQ3 736 aa18.75■□□□□ 0.59
HLA-DMA-201ENST00000374843 DIS3LQ8TF46 1054 aaKnown RBP18.75■□□□□ 0.59
HLA-DMA-201ENST00000374843 CPB2Q96IY4 423 aa18.75■□□□□ 0.59
HLA-DMA-201ENST00000374843 ERGIC2Q96RQ1 377 aa18.75■□□□□ 0.59
HLA-DMA-201ENST00000374843 FAM213AQ9BRX8 229 aa18.75■□□□□ 0.59
HLA-DMA-201ENST00000374843 NOC2LQ9Y3T9 749 aaKnown RBP18.75■□□□□ 0.59
HLA-DMA-201ENST00000374843 TANC1Q9C0D5 1861 aa18.74■□□□□ 0.59
HLA-DMA-201ENST00000374843 ZNF233A6NK53 670 aa18.74■□□□□ 0.59
HLA-DMA-201ENST00000374843 PITPNM1O00562 1244 aa18.74■□□□□ 0.59
HLA-DMA-201ENST00000374843 TLR3O15455 904 aaKnown RBP18.74■□□□□ 0.59
HLA-DMA-201ENST00000374843 TEX33O43247 280 aa18.74■□□□□ 0.59
HLA-DMA-201ENST00000374843 AFPP02771 609 aaKnown RBP18.74■□□□□ 0.59
HLA-DMA-201ENST00000374843 VAMP7P51809 220 aa18.74■□□□□ 0.59
HLA-DMA-201ENST00000374843 CLDN10P78369 228 aa18.74■□□□□ 0.59
HLA-DMA-201ENST00000374843 PSMD6Q15008 389 aa18.74■□□□□ 0.59
HLA-DMA-201ENST00000374843 TMEM132AQ24JP5 1023 aa18.74■□□□□ 0.59
HLA-DMA-201ENST00000374843 ZBTB41Q5SVQ8 909 aa18.74■□□□□ 0.59
HLA-DMA-201ENST00000374843 C1orf220Q5T0J3 134 aa18.74■□□□□ 0.59
HLA-DMA-201ENST00000374843 ZNF618Q5T7W0 954 aa18.74■□□□□ 0.59
HLA-DMA-201ENST00000374843 CREBRFQ8IUR6 639 aa18.74■□□□□ 0.59
HLA-DMA-201ENST00000374843 USP38Q8NB14 1042 aa18.74■□□□□ 0.59
HLA-DMA-201ENST00000374843 PLEKHO2Q8TD55 490 aa18.74■□□□□ 0.59
HLA-DMA-201ENST00000374843 TMEM106CQ9BVX2 250 aa18.74■□□□□ 0.59
HLA-DMA-201ENST00000374843 ERVK-5Q9HDB9 667 aa18.74■□□□□ 0.59
HLA-DMA-201ENST00000374843 CPSF3Q9UKF6 684 aaKnown RBP18.74■□□□□ 0.59
HLA-DMA-201ENST00000374843 GTPBP10A4D1E9 387 aaKnown RBP18.73■□□□□ 0.59
HLA-DMA-201ENST00000374843 PMM2O15305 246 aa18.73■□□□□ 0.59
HLA-DMA-201ENST00000374843 RPS6KA5O75582 802 aa18.73■□□□□ 0.59
HLA-DMA-201ENST00000374843 MATR3P43243 847 aaKnown RBP eCLIP18.73■□□□□ 0.59
HLA-DMA-201ENST00000374843 UBXN1Q04323 297 aa18.73■□□□□ 0.59
HLA-DMA-201ENST00000374843 KCNH2Q12809 1159 aa18.73■□□□□ 0.59
HLA-DMA-201ENST00000374843 BFSP2Q13515 415 aa18.73■□□□□ 0.59
HLA-DMA-201ENST00000374843 LPIN1Q14693 890 aa18.73■□□□□ 0.59
HLA-DMA-201ENST00000374843 DCAF17Q5H9S7 520 aaPredicted RBP18.73■□□□□ 0.59
HLA-DMA-201ENST00000374843 FKBP15Q5T1M5 1219 aa18.73■□□□□ 0.59
HLA-DMA-201ENST00000374843 SLC27A1Q6PCB7 646 aa18.73■□□□□ 0.59
HLA-DMA-201ENST00000374843 ZBTB33Q86T24 672 aa18.73■□□□□ 0.59
HLA-DMA-201ENST00000374843 USP37Q86T82 979 aa18.73■□□□□ 0.59
HLA-DMA-201ENST00000374843 PARD3BQ8TEW8 1205 aa18.73■□□□□ 0.59
HLA-DMA-201ENST00000374843 ADPGKQ9BRR6 497 aa18.73■□□□□ 0.59
HLA-DMA-201ENST00000374843 TCHPQ9BT92 498 aa18.73■□□□□ 0.59
HLA-DMA-201ENST00000374843 C11orf49Q9H6J7 331 aa18.73■□□□□ 0.59
HLA-DMA-201ENST00000374843 RBAKQ9NYW8 714 aaPredicted RBP18.73■□□□□ 0.59
HLA-DMA-201ENST00000374843 RALGAPA2Q2PPJ7 1873 aa18.72■□□□□ 0.59
HLA-DMA-201ENST00000374843 TRIM49P0CI25 452 aa18.72■□□□□ 0.59
HLA-DMA-201ENST00000374843 TRIM49CP0CI26 452 aa18.72■□□□□ 0.59
HLA-DMA-201ENST00000374843 HARSP12081 509 aaKnown RBP18.72■□□□□ 0.59
HLA-DMA-201ENST00000374843 GTF2H1P32780 548 aa18.72■□□□□ 0.59
HLA-DMA-201ENST00000374843 GRM5P41594 1212 aa18.72■□□□□ 0.59
HLA-DMA-201ENST00000374843 ACOT2P49753 483 aa18.72■□□□□ 0.59
HLA-DMA-201ENST00000374843 FAM43BQ6ZT52 329 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms