RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 TSC22D3Q99576 134 aa18.52■□□□□ 0.56
PTPRU-202ENST00000373779 FAM167BQ9BTA0 163 aa18.52■□□□□ 0.56
PTPRU-202ENST00000373779 TRPC5Q9UL62 973 aaPredicted RBP18.52■□□□□ 0.56
PTPRU-202ENST00000373779 ARFIP2P53365 341 aa18.52■□□□□ 0.56
PTPRU-202ENST00000373779 CCNYQ8ND76 341 aa18.52■□□□□ 0.56
PTPRU-202ENST00000373779 TRABDQ9H4I3 376 aa18.52■□□□□ 0.56
PTPRU-202ENST00000373779 SRGAP2CP0DJJ0 459 aa18.52■□□□□ 0.55
PTPRU-202ENST00000373779 RAD23BP54727 409 aa18.52■□□□□ 0.55
PTPRU-202ENST00000373779 GADL1Q6ZQY3 521 aa18.52■□□□□ 0.55
PTPRU-202ENST00000373779 HDAC7Q8WUI4 952 aa18.52■□□□□ 0.55
PTPRU-202ENST00000373779 VCX3AQ9NNX9 186 aa18.52■□□□□ 0.55
PTPRU-202ENST00000373779 DDX56Q9NY93 547 aaKnown RBP18.52■□□□□ 0.55
PTPRU-202ENST00000373779 YWHABP31946 246 aaKnown RBP18.52■□□□□ 0.55
PTPRU-202ENST00000373779 CDO1Q16878 200 aa18.52■□□□□ 0.55
PTPRU-202ENST00000373779 KCTD17Q8N5Z5 321 aa18.52■□□□□ 0.55
PTPRU-202ENST00000373779 CEP120Q8N960 986 aa18.52■□□□□ 0.55
PTPRU-202ENST00000373779 RAPGEF5Q92565 580 aa18.52■□□□□ 0.55
PTPRU-202ENST00000373779 RPF1Q9H9Y2 349 aaKnown RBP18.52■□□□□ 0.55
PTPRU-202ENST00000373779 PARVAQ9NVD7 372 aa18.52■□□□□ 0.55
PTPRU-202ENST00000373779 GABBR1Q9UBS5 961 aa18.52■□□□□ 0.55
PTPRU-202ENST00000373779 USH1CQ9Y6N9 552 aa18.52■□□□□ 0.55
PTPRU-202ENST00000373779 DLG5Q8TDM6 1919 aa18.51■□□□□ 0.55
PTPRU-202ENST00000373779 BARGINQ6ZT62 677 aa18.51■□□□□ 0.55
PTPRU-202ENST00000373779 TMEM120BA0PK00 339 aa18.51■□□□□ 0.55
PTPRU-202ENST00000373779 MMP10P09238 476 aa18.51■□□□□ 0.55
PTPRU-202ENST00000373779 MMEL1Q495T6 779 aa18.51■□□□□ 0.55
PTPRU-202ENST00000373779 NUDCD1Q96RS6 583 aa18.51■□□□□ 0.55
PTPRU-202ENST00000373779 THAP2Q9H0W7 228 aa18.51■□□□□ 0.55
PTPRU-202ENST00000373779 SLC38A10Q9HBR0 1119 aa18.51■□□□□ 0.55
PTPRU-202ENST00000373779 CLEC11AQ9Y240 323 aa18.51■□□□□ 0.55
PTPRU-202ENST00000373779 TACC3Q9Y6A5 838 aa18.51■□□□□ 0.55
PTPRU-202ENST00000373779 PDHA1P08559 390 aa18.51■□□□□ 0.55
PTPRU-202ENST00000373779 TFDP2Q14188 446 aa18.51■□□□□ 0.55
PTPRU-202ENST00000373779 RPS6KA2Q15349 733 aa18.51■□□□□ 0.55
PTPRU-202ENST00000373779 HSP90AA5PQ58FG0 334 aa18.51■□□□□ 0.55
PTPRU-202ENST00000373779 ZNF667Q5HYK9 610 aa18.51■□□□□ 0.55
PTPRU-202ENST00000373779 SESTD1Q86VW0 696 aa18.51■□□□□ 0.55
PTPRU-202ENST00000373779 LDHDQ86WU2 507 aa18.51■□□□□ 0.55
PTPRU-202ENST00000373779 PABPC3Q9H361 631 aaKnown RBP18.51■□□□□ 0.55
PTPRU-202ENST00000373779 LPXNO60711 386 aa18.51■□□□□ 0.55
PTPRU-202ENST00000373779 KRT38O76015 456 aa18.51■□□□□ 0.55
PTPRU-202ENST00000373779 CDC42EP5Q6NZY7 148 aa18.51■□□□□ 0.55
PTPRU-202ENST00000373779 FOXR1Q6PIV2 292 aa18.51■□□□□ 0.55
PTPRU-202ENST00000373779 FAM149B1Q96BN6 582 aa18.51■□□□□ 0.55
PTPRU-202ENST00000373779 CYTH2Q99418 400 aa18.51■□□□□ 0.55
PTPRU-202ENST00000373779 TIPINQ9BVW5 301 aa18.51■□□□□ 0.55
PTPRU-202ENST00000373779 SMYD2Q9NRG4 433 aa18.51■□□□□ 0.55
PTPRU-202ENST00000373779 AKT3Q9Y243 479 aa18.51■□□□□ 0.55
PTPRU-202ENST00000373779 MED24O75448 989 aa18.5■□□□□ 0.55
PTPRU-202ENST00000373779 NCF2P19878 526 aaPredicted RBP18.5■□□□□ 0.55
PTPRU-202ENST00000373779 ELF1P32519 619 aa18.5■□□□□ 0.55
PTPRU-202ENST00000373779 POLR3CQ9BUI4 534 aaPredicted RBP18.5■□□□□ 0.55
PTPRU-202ENST00000373779 CXorf56Q9H5V9 222 aa18.5■□□□□ 0.55
PTPRU-202ENST00000373779 KNDC1Q76NI1 1749 aa18.5■□□□□ 0.55
PTPRU-202ENST00000373779 MAPK7Q13164 816 aa18.5■□□□□ 0.55
PTPRU-202ENST00000373779 POLR3FQ9H1D9 316 aaPredicted RBP18.5■□□□□ 0.55
PTPRU-202ENST00000373779 SMG5Q9UPR3 1016 aaKnown RBP18.5■□□□□ 0.55
PTPRU-202ENST00000373779 RICTORQ6R327 1708 aa18.5■□□□□ 0.55
PTPRU-202ENST00000373779 GOLGA8QA0A0J9YX86 632 aa18.5■□□□□ 0.55
PTPRU-202ENST00000373779 GOLGA8OA6NCC3 632 aa18.5■□□□□ 0.55
PTPRU-202ENST00000373779 GOLGA8NF8WBI6 632 aa18.5■□□□□ 0.55
PTPRU-202ENST00000373779 ATMINO43313 823 aaPredicted RBP18.5■□□□□ 0.55
PTPRU-202ENST00000373779 KIF1CO43896 1103 aaKnown RBP18.5■□□□□ 0.55
PTPRU-202ENST00000373779 KRT7P08729 469 aa18.5■□□□□ 0.55
PTPRU-202ENST00000373779 ZNF699Q32M78 642 aa18.5■□□□□ 0.55
PTPRU-202ENST00000373779 CYFIP1Q7L576 1253 aa18.5■□□□□ 0.55
PTPRU-202ENST00000373779 COL23A1Q86Y22 540 aaPredicted RBP18.5■□□□□ 0.55
PTPRU-202ENST00000373779 CREG2Q8IUH2 290 aa18.5■□□□□ 0.55
PTPRU-202ENST00000373779 WDR75Q8IWA0 830 aaKnown RBP18.5■□□□□ 0.55
PTPRU-202ENST00000373779 GSDMBQ8TAX9 411 aa18.5■□□□□ 0.55
PTPRU-202ENST00000373779 NLRP7Q8WX94 980 aa18.5■□□□□ 0.55
PTPRU-202ENST00000373779 RBM15Q96T37 977 aaKnown RBP eCLIP18.5■□□□□ 0.55
PTPRU-202ENST00000373779 COILP38432 576 aaPredicted RBP18.5■□□□□ 0.55
PTPRU-202ENST00000373779 NPEPPSP55786 919 aa18.5■□□□□ 0.55
PTPRU-202ENST00000373779 PRPSAP1Q14558 356 aa18.5■□□□□ 0.55
PTPRU-202ENST00000373779 P3H1Q32P28 736 aa18.5■□□□□ 0.55
PTPRU-202ENST00000373779 SLC24A3Q9HC58 644 aa18.5■□□□□ 0.55
PTPRU-202ENST00000373779 LOC102724159A0A0B4J2E5 919 aa18.49■□□□□ 0.55
PTPRU-202ENST00000373779 IFRD2Q12894 506 aaPredicted RBP18.49■□□□□ 0.55
PTPRU-202ENST00000373779 PWP2Q15269 919 aaKnown RBP18.49■□□□□ 0.55
PTPRU-202ENST00000373779 ZNF571Q7Z3V5 609 aaPredicted RBP18.49■□□□□ 0.55
PTPRU-202ENST00000373779 SGSM3Q96HU1 749 aa18.49■□□□□ 0.55
PTPRU-202ENST00000373779 MTRQ99707 1265 aa18.49■□□□□ 0.55
PTPRU-202ENST00000373779 YIPF3Q9GZM5 350 aa18.49■□□□□ 0.55
PTPRU-202ENST00000373779 VCPKMTQ9H867 229 aa18.49■□□□□ 0.55
PTPRU-202ENST00000373779 KCNJ1P48048 391 aa18.49■□□□□ 0.55
PTPRU-202ENST00000373779 CYB5D1Q6P9G0 228 aa18.49■□□□□ 0.55
PTPRU-202ENST00000373779 DNAAF3Q8N9W5 541 aa18.49■□□□□ 0.55
PTPRU-202ENST00000373779 C9orf72Q96LT7 481 aa18.49■□□□□ 0.55
PTPRU-202ENST00000373779 ASNSD1Q9NWL6 643 aa18.49■□□□□ 0.55
PTPRU-202ENST00000373779 HERC5Q9UII4 1024 aaKnown RBP18.49■□□□□ 0.55
PTPRU-202ENST00000373779 PRR5LQ6MZQ0 368 aa18.49■□□□□ 0.55
PTPRU-202ENST00000373779 SWSAP1Q6NVH7 229 aa18.49■□□□□ 0.55
PTPRU-202ENST00000373779 THNSL1Q8IYQ7 743 aa18.49■□□□□ 0.55
PTPRU-202ENST00000373779 SCFD1Q8WVM8 642 aa18.49■□□□□ 0.55
PTPRU-202ENST00000373779 TLR10Q9BXR5 811 aa18.49■□□□□ 0.55
PTPRU-202ENST00000373779 NGRNQ9NPE2 291 aaKnown RBP18.49■□□□□ 0.55
PTPRU-202ENST00000373779 ZNF277Q9NRM2 450 aaPredicted RBP18.49■□□□□ 0.55
PTPRU-202ENST00000373779 P4HA2O15460 535 aa18.49■□□□□ 0.55
PTPRU-202ENST00000373779 COG7P83436 770 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms