RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 SH2D3AQ9BRG2 576 aa16.56■□□□□ 0.24
CDKN1A-202ENST00000373711 DDX23Q9BUQ8 820 aaKnown RBP16.56■□□□□ 0.24
CDKN1A-202ENST00000373711 FAM126AQ9BYI3 521 aaPredicted RBP16.56■□□□□ 0.24
CDKN1A-202ENST00000373711 EPC1Q9H2F5 836 aa16.56■□□□□ 0.24
CDKN1A-202ENST00000373711 GPR179Q6PRD1 2367 aa16.56■□□□□ 0.24
CDKN1A-202ENST00000373711 NID2Q14112 1375 aa16.55■□□□□ 0.24
CDKN1A-202ENST00000373711 ZMYM2Q9UBW7 1377 aa16.55■□□□□ 0.24
CDKN1A-202ENST00000373711 TMEM150BA6NC51 233 aa16.55■□□□□ 0.24
CDKN1A-202ENST00000373711 ARL5CA6NH57 179 aa16.55■□□□□ 0.24
CDKN1A-202ENST00000373711 TBC1D4O60343 1298 aa16.55■□□□□ 0.24
CDKN1A-202ENST00000373711 XYLBO75191 536 aa16.55■□□□□ 0.24
CDKN1A-202ENST00000373711 CDC45O75419 566 aa16.55■□□□□ 0.24
CDKN1A-202ENST00000373711 STBD1O95210 358 aa16.55■□□□□ 0.24
CDKN1A-202ENST00000373711 EFEMP2O95967 443 aa16.55■□□□□ 0.24
CDKN1A-202ENST00000373711 SRGAP2CP0DJJ0 459 aa16.55■□□□□ 0.24
CDKN1A-202ENST00000373711 MLH1P40692 756 aa16.55■□□□□ 0.24
CDKN1A-202ENST00000373711 AFF1P51825 1210 aaKnown RBP16.55■□□□□ 0.24
CDKN1A-202ENST00000373711 SNW1Q13573 536 aaKnown RBP16.55■□□□□ 0.24
CDKN1A-202ENST00000373711 ZBTB41Q5SVQ8 909 aa16.55■□□□□ 0.24
CDKN1A-202ENST00000373711 UBXN11Q5T124 520 aa16.55■□□□□ 0.24
CDKN1A-202ENST00000373711 ANO5Q75V66 913 aa16.55■□□□□ 0.24
CDKN1A-202ENST00000373711 MBOAT7Q96N66 472 aa16.55■□□□□ 0.24
CDKN1A-202ENST00000373711 GAD1Q99259 594 aa16.55■□□□□ 0.24
CDKN1A-202ENST00000373711 RNF26Q9BY78 433 aaPredicted RBP16.55■□□□□ 0.24
CDKN1A-202ENST00000373711 TRIM6Q9C030 488 aaPredicted RBP16.55■□□□□ 0.24
CDKN1A-202ENST00000373711 ADAM28Q9UKQ2 775 aa16.55■□□□□ 0.24
CDKN1A-202ENST00000373711 RAB23Q9ULC3 237 aa16.55■□□□□ 0.24
CDKN1A-202ENST00000373711 USP18Q9UMW8 372 aa16.55■□□□□ 0.24
CDKN1A-202ENST00000373711 IPPQ9Y573 584 aa16.55■□□□□ 0.24
CDKN1A-202ENST00000373711 SF3B1O75533 1304 aaKnown RBP eCLIP16.54■□□□□ 0.249e-6■■■■■ 68.9
CDKN1A-202ENST00000373711 FAM170BA6NMN3 283 aa16.54■□□□□ 0.24
CDKN1A-202ENST00000373711 HOXA9P31269 272 aa16.54■□□□□ 0.24
CDKN1A-202ENST00000373711 HOXA11P31270 313 aaPredicted RBP16.54■□□□□ 0.24
CDKN1A-202ENST00000373711 QARSP47897 775 aaKnown RBP16.54■□□□□ 0.24
CDKN1A-202ENST00000373711 SCNN1GP51170 649 aa16.54■□□□□ 0.24
CDKN1A-202ENST00000373711 PPP2R5DQ14738 602 aa16.54■□□□□ 0.24
CDKN1A-202ENST00000373711 TSGA10IPQ3SY00 556 aa16.54■□□□□ 0.24
CDKN1A-202ENST00000373711 SLC44A4Q53GD3 710 aa16.54■□□□□ 0.24
CDKN1A-202ENST00000373711 PLA2G4FQ68DD2 849 aa16.54■□□□□ 0.24
CDKN1A-202ENST00000373711 LILRA6Q6PI73 481 aa16.54■□□□□ 0.24
CDKN1A-202ENST00000373711 GLYCTKQ8IVS8 523 aa16.54■□□□□ 0.24
CDKN1A-202ENST00000373711 ZBTB44Q8NCP5 570 aa16.54■□□□□ 0.24
CDKN1A-202ENST00000373711 TBCKQ8TEA7 893 aa16.54■□□□□ 0.24
CDKN1A-202ENST00000373711 PRPF31Q8WWY3 499 aaKnown RBP16.54■□□□□ 0.24
CDKN1A-202ENST00000373711 FGF14Q92915 247 aa16.54■□□□□ 0.24
CDKN1A-202ENST00000373711 CEP170P1Q96L14 293 aa16.54■□□□□ 0.24
CDKN1A-202ENST00000373711 LTB4R2Q9NPC1 389 aa16.54■□□□□ 0.24
CDKN1A-202ENST00000373711 SH3GLB2Q9NR46 395 aa16.54■□□□□ 0.24
CDKN1A-202ENST00000373711 MRPS17Q9Y2R5 130 aaKnown RBP16.54■□□□□ 0.24
CDKN1A-202ENST00000373711 GIT1Q9Y2X7 761 aa16.54■□□□□ 0.24
CDKN1A-202ENST00000373711 ADAMTS3O15072 1205 aa16.53■□□□□ 0.24
CDKN1A-202ENST00000373711 LRRN2O75325 713 aa16.53■□□□□ 0.24
CDKN1A-202ENST00000373711 NLRP5P59047 1200 aa16.53■□□□□ 0.24
CDKN1A-202ENST00000373711 LAMTOR4Q0VGL1 99 aa16.53■□□□□ 0.24
CDKN1A-202ENST00000373711 GRIK3Q13003 919 aa16.53■□□□□ 0.24
CDKN1A-202ENST00000373711 ST3GAL2Q16842 350 aa16.53■□□□□ 0.24
CDKN1A-202ENST00000373711 PPM1LQ5SGD2 360 aa16.53■□□□□ 0.24
CDKN1A-202ENST00000373711 PDXDC1Q6P996 788 aa16.53■□□□□ 0.24
CDKN1A-202ENST00000373711 MOXD1Q6UVY6 613 aa16.53■□□□□ 0.24
CDKN1A-202ENST00000373711 PARM1Q6UWI2 310 aa16.53■□□□□ 0.24
CDKN1A-202ENST00000373711 B3GNT9Q6UX72 402 aa16.53■□□□□ 0.24
CDKN1A-202ENST00000373711 GRASPQ7Z6J2 395 aaPredicted RBP16.53■□□□□ 0.24
CDKN1A-202ENST00000373711 RNF149Q8NC42 400 aa16.53■□□□□ 0.24
CDKN1A-202ENST00000373711 SMG8Q8ND04 991 aaKnown RBP16.53■□□□□ 0.24
CDKN1A-202ENST00000373711 PHF20Q9BVI0 1012 aa16.53■□□□□ 0.24
CDKN1A-202ENST00000373711 DHX33Q9H6R0 707 aaKnown RBP16.53■□□□□ 0.24
CDKN1A-202ENST00000373711 FBXW11Q9UKB1 542 aa16.53■□□□□ 0.24
CDKN1A-202ENST00000373711 RALGAPA1Q6GYQ0 2036 aa16.52■□□□□ 0.24
CDKN1A-202ENST00000373711 MAP1BP46821 2468 aaKnown RBP16.52■□□□□ 0.24
CDKN1A-202ENST00000373711 CYP3A7-CYP3A51PA0A087WV96 503 aa16.52■□□□□ 0.24
CDKN1A-202ENST00000373711 LILRB5O75023 590 aa16.52■□□□□ 0.24
CDKN1A-202ENST00000373711 TADA2AO75478 443 aa16.52■□□□□ 0.24
CDKN1A-202ENST00000373711 CYP3A7P24462 503 aa16.52■□□□□ 0.24
CDKN1A-202ENST00000373711 RPS9P46781 194 aaKnown RBP16.52■□□□□ 0.24
CDKN1A-202ENST00000373711 NRLP54845 237 aa16.52■□□□□ 0.24
CDKN1A-202ENST00000373711 TFDP1Q14186 410 aa16.52■□□□□ 0.24
CDKN1A-202ENST00000373711 MXD4Q14582 209 aaPredicted RBP16.52■□□□□ 0.24
CDKN1A-202ENST00000373711 OTUD6AQ7L8S5 288 aa16.52■□□□□ 0.24
CDKN1A-202ENST00000373711 FGF13Q92913 245 aa16.52■□□□□ 0.24
CDKN1A-202ENST00000373711 GJA10Q969M2 543 aa16.52■□□□□ 0.24
CDKN1A-202ENST00000373711 TMEM143Q96AN5 459 aa16.52■□□□□ 0.24
CDKN1A-202ENST00000373711 CSRNP2Q9H175 543 aa16.52■□□□□ 0.24
CDKN1A-202ENST00000373711 MINDY3Q9H8M7 445 aa16.52■□□□□ 0.24
CDKN1A-202ENST00000373711 VPS54Q9P1Q0 977 aa16.52■□□□□ 0.24
CDKN1A-202ENST00000373711 SEC24BO95487 1268 aa16.51■□□□□ 0.23
CDKN1A-202ENST00000373711 P4HBP07237 508 aaKnown RBP16.51■□□□□ 0.23
CDKN1A-202ENST00000373711 C8AP07357 584 aa16.51■□□□□ 0.23
CDKN1A-202ENST00000373711 ADRB1P08588 477 aa16.51■□□□□ 0.23
CDKN1A-202ENST00000373711 POU2F2P09086 479 aa16.51■□□□□ 0.23
CDKN1A-202ENST00000373711 FERMT3Q86UX7 667 aa16.51■□□□□ 0.23
CDKN1A-202ENST00000373711 ETNPPLQ8TBG4 499 aa16.51■□□□□ 0.23
CDKN1A-202ENST00000373711 ZFP42Q96MM3 310 aa16.51■□□□□ 0.23
CDKN1A-202ENST00000373711 IER2Q9BTL4 223 aa16.51■□□□□ 0.23
CDKN1A-202ENST00000373711 APOL6Q9BWW8 343 aa16.51■□□□□ 0.23
CDKN1A-202ENST00000373711 SLC26A6Q9BXS9 759 aa16.51■□□□□ 0.23
CDKN1A-202ENST00000373711 GPR62Q9BZJ7 368 aa16.51■□□□□ 0.23
CDKN1A-202ENST00000373711 SLKQ9H2G2 1235 aaPredicted RBP16.51■□□□□ 0.23
CDKN1A-202ENST00000373711 KCNH3Q9ULD8 1083 aa16.51■□□□□ 0.23
CDKN1A-202ENST00000373711 POLIQ9UNA4 740 aa16.51■□□□□ 0.23
CDKN1A-202ENST00000373711 TSPAN1O60635 241 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms