RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 CEP68Q76N32 757 aa13.9□□□□□ -0.18
HDAC8-204ENST00000373560 LONP2Q86WA8 852 aa13.9□□□□□ -0.18
HDAC8-204ENST00000373560 MXRA8Q9BRK3 442 aa13.9□□□□□ -0.18
HDAC8-204ENST00000373560 SDF4Q9BRK5 362 aa13.9□□□□□ -0.18
HDAC8-204ENST00000373560 UBAC1Q9BSL1 405 aa13.9□□□□□ -0.18
HDAC8-204ENST00000373560 ZNF302Q9NR11 478 aa13.9□□□□□ -0.18
HDAC8-204ENST00000373560 RBM12Q9NTZ6 932 aaKnown RBP13.9□□□□□ -0.18
HDAC8-204ENST00000373560 FAM105AQ9NUU6 356 aa13.9□□□□□ -0.18
HDAC8-204ENST00000373560 KLK13Q9UKR3 277 aa13.9□□□□□ -0.18
HDAC8-204ENST00000373560 FAN1Q9Y2M0 1017 aa13.9□□□□□ -0.18
HDAC8-204ENST00000373560 TDRD15B5MCY1 1934 aaKnown RBP13.9□□□□□ -0.18
HDAC8-204ENST00000373560 CCL16O15467 120 aa13.89□□□□□ -0.19
HDAC8-204ENST00000373560 POMCP01189 267 aa13.89□□□□□ -0.19
HDAC8-204ENST00000373560 CXCL12P48061 93 aa13.89□□□□□ -0.19
HDAC8-204ENST00000373560 DSG1Q02413 1049 aa13.89□□□□□ -0.19
HDAC8-204ENST00000373560 TRAF1Q13077 416 aa13.89□□□□□ -0.19
HDAC8-204ENST00000373560 TWF2Q6IBS0 349 aaKnown RBP13.89□□□□□ -0.19
HDAC8-204ENST00000373560 SWSAP1Q6NVH7 229 aa13.89□□□□□ -0.19
HDAC8-204ENST00000373560 KBTBD6Q86V97 674 aa13.89□□□□□ -0.19
HDAC8-204ENST00000373560 HDAC7Q8WUI4 952 aa13.89□□□□□ -0.19
HDAC8-204ENST00000373560 KRTAP3-3Q9BYR6 98 aa13.89□□□□□ -0.19
HDAC8-204ENST00000373560 KRTAP3-2Q9BYR7 98 aa13.89□□□□□ -0.19
HDAC8-204ENST00000373560 PLEKHA4Q9H4M7 779 aa13.89□□□□□ -0.19
HDAC8-204ENST00000373560 DACT1Q9NYF0 836 aa13.89□□□□□ -0.19
HDAC8-204ENST00000373560 PCDHA6Q9UN73 950 aa13.89□□□□□ -0.19
HDAC8-204ENST00000373560 MRPS17Q9Y2R5 130 aaKnown RBP13.89□□□□□ -0.19
HDAC8-204ENST00000373560 PCDHA8Q9Y5H6 950 aa13.89□□□□□ -0.19
HDAC8-204ENST00000373560 NCANO14594 1321 aa13.89□□□□□ -0.19
HDAC8-204ENST00000373560 CAPNS1P04632 268 aa13.88□□□□□ -0.19
HDAC8-204ENST00000373560 CHRNB1P11230 501 aa13.88□□□□□ -0.19
HDAC8-204ENST00000373560 FCARP24071 287 aa13.88□□□□□ -0.19
HDAC8-204ENST00000373560 C20orf194Q5TEA3 1177 aa13.88□□□□□ -0.19
HDAC8-204ENST00000373560 FAM160B1Q5W0V3 765 aa13.88□□□□□ -0.19
HDAC8-204ENST00000373560 TANGO2Q6ICL3 276 aa13.88□□□□□ -0.19
HDAC8-204ENST00000373560 ELMSAN1Q6PJG2 1045 aa13.88□□□□□ -0.19
HDAC8-204ENST00000373560 EVI5LQ96CN4 794 aa13.88□□□□□ -0.19
HDAC8-204ENST00000373560 MBOAT7Q96N66 472 aa13.88□□□□□ -0.19
HDAC8-204ENST00000373560 SCLT1Q96NL6 688 aa13.88□□□□□ -0.19
HDAC8-204ENST00000373560 DPP7Q9UHL4 492 aa13.88□□□□□ -0.19
HDAC8-204ENST00000373560 FBXW11Q9UKB1 542 aa13.88□□□□□ -0.19
HDAC8-204ENST00000373560 PIN4Q9Y237 131 aaKnown RBP13.88□□□□□ -0.19
HDAC8-204ENST00000373560 C4orf47A7E2U8 309 aa13.87□□□□□ -0.19
HDAC8-204ENST00000373560 PRB1P04280 392 aa13.87□□□□□ -0.19
HDAC8-204ENST00000373560 RAP1GAPP47736 663 aa13.87□□□□□ -0.19
HDAC8-204ENST00000373560 TROAPQ12815 778 aa13.87□□□□□ -0.19
HDAC8-204ENST00000373560 PPP2R5DQ14738 602 aa13.87□□□□□ -0.19
HDAC8-204ENST00000373560 SLC5A9Q2M3M2 681 aa13.87□□□□□ -0.19
HDAC8-204ENST00000373560 PRSS55Q6UWB4 352 aaPredicted RBP13.87□□□□□ -0.19
HDAC8-204ENST00000373560 CKAP2LQ8IYA6 745 aa13.87□□□□□ -0.19
HDAC8-204ENST00000373560 COLGALT2Q8IYK4 626 aa13.87□□□□□ -0.19
HDAC8-204ENST00000373560 NLRP7Q8WX94 980 aa13.87□□□□□ -0.19
HDAC8-204ENST00000373560 MCRS1Q96EZ8 462 aa13.87□□□□□ -0.19
HDAC8-204ENST00000373560 MAP7D2Q96T17 732 aa13.87□□□□□ -0.19
HDAC8-204ENST00000373560 TMEM175Q9BSA9 504 aa13.87□□□□□ -0.19
HDAC8-204ENST00000373560 EDEM2Q9BV94 578 aa13.87□□□□□ -0.19
HDAC8-204ENST00000373560 TRAIPQ9BWF2 469 aa13.87□□□□□ -0.19
HDAC8-204ENST00000373560 GPR62Q9BZJ7 368 aa13.87□□□□□ -0.19
HDAC8-204ENST00000373560 CHST7Q9NS84 486 aa13.87□□□□□ -0.19
HDAC8-204ENST00000373560 CACNA2D2Q9NY47 1150 aa13.87□□□□□ -0.19
HDAC8-204ENST00000373560 POLIQ9UNA4 740 aa13.87□□□□□ -0.19
HDAC8-204ENST00000373560 hCG_1642624A0A1W2PR95 340 aa13.86□□□□□ -0.19
HDAC8-204ENST00000373560 MAFGO15525 162 aa13.86□□□□□ -0.19
HDAC8-204ENST00000373560 ECI2O75521 394 aa13.86□□□□□ -0.19
HDAC8-204ENST00000373560 ALDH2P05091 517 aa13.86□□□□□ -0.19
HDAC8-204ENST00000373560 MPLP40238 635 aa13.86□□□□□ -0.19
HDAC8-204ENST00000373560 OR1G1P47890 313 aa13.86□□□□□ -0.19
HDAC8-204ENST00000373560 PXNP49023 591 aaPredicted RBP13.86□□□□□ -0.19
HDAC8-204ENST00000373560 PROSER1Q86XN7 944 aa13.86□□□□□ -0.19
HDAC8-204ENST00000373560 LURAP1LQ8IV03 231 aa13.86□□□□□ -0.19
HDAC8-204ENST00000373560 FAM3CQ92520 227 aa13.86□□□□□ -0.19
HDAC8-204ENST00000373560 RABGGTAQ92696 567 aa13.86□□□□□ -0.19
HDAC8-204ENST00000373560 CACNG4Q9UBN1 327 aa13.86□□□□□ -0.19
HDAC8-204ENST00000373560 VWA8A3KMH1 1905 aa13.86□□□□□ -0.19
HDAC8-204ENST00000373560 CARNS1A5YM72 827 aa13.85□□□□□ -0.19
HDAC8-204ENST00000373560 DHX15O43143 795 aaKnown RBP13.85□□□□□ -0.19
HDAC8-204ENST00000373560 ADAM12O43184 909 aa13.85□□□□□ -0.19
HDAC8-204ENST00000373560 CEBPBP17676 345 aa13.85□□□□□ -0.19
HDAC8-204ENST00000373560 CNR2P34972 360 aa13.85□□□□□ -0.19
HDAC8-204ENST00000373560 WDR5BQ86VZ2 330 aa13.85□□□□□ -0.19
HDAC8-204ENST00000373560 CMTR1Q8N1G2 835 aaKnown RBP13.85□□□□□ -0.19
HDAC8-204ENST00000373560 URGCPQ8TCY9 931 aa13.85□□□□□ -0.19
HDAC8-204ENST00000373560 DNASE1L2Q92874 299 aa13.85□□□□□ -0.19
HDAC8-204ENST00000373560 IER2Q9BTL4 223 aa13.85□□□□□ -0.19
HDAC8-204ENST00000373560 PSTPIP2Q9H939 334 aa13.85□□□□□ -0.19
HDAC8-204ENST00000373560 RSAD1Q9HA92 442 aa13.85□□□□□ -0.19
HDAC8-204ENST00000373560 LY9Q9HBG7 655 aa13.85□□□□□ -0.19
HDAC8-204ENST00000373560 MIOSQ9NXC5 875 aa13.85□□□□□ -0.19
HDAC8-204ENST00000373560 DNMT3BQ9UBC3 853 aaKnown RBP13.85□□□□□ -0.19
HDAC8-204ENST00000373560 MAFBQ9Y5Q3 323 aaPredicted RBP13.85□□□□□ -0.19
HDAC8-204ENST00000373560 A0A087WZ62 844 aa13.84□□□□□ -0.19
HDAC8-204ENST00000373560 ZNF862O60290 1169 aa13.84□□□□□ -0.19
HDAC8-204ENST00000373560 PAPSS2O95340 614 aaPredicted RBP13.84□□□□□ -0.19
HDAC8-204ENST00000373560 PLEKHA8P1O95397 391 aa13.84□□□□□ -0.19
HDAC8-204ENST00000373560 C8AP07357 584 aa13.84□□□□□ -0.19
HDAC8-204ENST00000373560 KIF5BP33176 963 aa13.84□□□□□ -0.19
HDAC8-204ENST00000373560 LSM11P83369 360 aaKnown RBP eCLIP13.84□□□□□ -0.19
HDAC8-204ENST00000373560 PTGDRQ13258 359 aa13.84□□□□□ -0.19
HDAC8-204ENST00000373560 SPEM1Q8N4L4 309 aa13.84□□□□□ -0.19
HDAC8-204ENST00000373560 FAM193BQ96PV7 902 aaPredicted RBP13.84□□□□□ -0.19
HDAC8-204ENST00000373560 FDXACB1Q9BRP7 624 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms