RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 PLPPR4Q7Z2D5 763 aa21.19■□□□□ 0.98
HDAC1-201ENST00000373548 SLC20A1Q8WUM9 679 aa21.19■□□□□ 0.98
HDAC1-201ENST00000373548 ZBTB45Q96K62 511 aaPredicted RBP21.19■□□□□ 0.98
HDAC1-201ENST00000373548 AGPAT1Q99943 283 aa21.19■□□□□ 0.98
HDAC1-201ENST00000373548 TMEM134Q9H6X4 195 aa21.19■□□□□ 0.98
HDAC1-201ENST00000373548 FAM53CQ9NYF3 392 aa21.19■□□□□ 0.98
HDAC1-201ENST00000373548 AGO2Q9UKV8 859 aaKnown RBP21.19■□□□□ 0.98
HDAC1-201ENST00000373548 A0A0A6YYK5 440 aaPredicted RBP21.18■□□□□ 0.98
HDAC1-201ENST00000373548 CCL15-CCL14A0A0B4J2E2 113 aa21.18■□□□□ 0.98
HDAC1-201ENST00000373548 ASB14A6NK59 587 aa21.18■□□□□ 0.98
HDAC1-201ENST00000373548 NLRP11P59045 1033 aaKnown RBP21.18■□□□□ 0.98
HDAC1-201ENST00000373548 CCL15Q16663 113 aa21.18■□□□□ 0.98
HDAC1-201ENST00000373548 PALB2Q86YC2 1186 aa21.18■□□□□ 0.98
HDAC1-201ENST00000373548 PPM1KQ8N3J5 372 aa21.18■□□□□ 0.98
HDAC1-201ENST00000373548 ATP8B4Q8TF62 1192 aa21.18■□□□□ 0.98
HDAC1-201ENST00000373548 TARS2Q9BW92 718 aaKnown RBP21.18■□□□□ 0.98
HDAC1-201ENST00000373548 RAB20Q9NX57 234 aa21.18■□□□□ 0.98
HDAC1-201ENST00000373548 SLC45A1Q9Y2W3 748 aa21.18■□□□□ 0.98
HDAC1-201ENST00000373548 KIAA0391O15091 583 aaKnown RBP21.17■□□□□ 0.98
HDAC1-201ENST00000373548 ADCY3O60266 1144 aa21.17■□□□□ 0.98
HDAC1-201ENST00000373548 NOP2P46087 812 aaKnown RBP21.17■□□□□ 0.98
HDAC1-201ENST00000373548 CCNA1P78396 465 aa21.17■□□□□ 0.98
HDAC1-201ENST00000373548 C2orf54Q08AI8 447 aa21.17■□□□□ 0.98
HDAC1-201ENST00000373548 PLCB4Q15147 1175 aa21.17■□□□□ 0.98
HDAC1-201ENST00000373548 IFI16Q16666 785 aaKnown RBP21.17■□□□□ 0.98
HDAC1-201ENST00000373548 ARMCX2Q7L311 632 aa21.17■□□□□ 0.98
HDAC1-201ENST00000373548 FAM71AQ8IYT1 594 aa21.17■□□□□ 0.98
HDAC1-201ENST00000373548 LRRC57Q8N9N7 239 aa21.17■□□□□ 0.98
HDAC1-201ENST00000373548 HELQQ8TDG4 1101 aa21.17■□□□□ 0.98
HDAC1-201ENST00000373548 PRPF31Q8WWY3 499 aaKnown RBP21.17■□□□□ 0.98
HDAC1-201ENST00000373548 BRI3BPQ8WY22 251 aa21.17■□□□□ 0.98
HDAC1-201ENST00000373548 FAM84AQ96KN4 292 aa21.17■□□□□ 0.98
HDAC1-201ENST00000373548 ARFGAP3Q9NP61 516 aa21.17■□□□□ 0.98
HDAC1-201ENST00000373548 TMCO5BA8MYB1 307 aa21.17■□□□□ 0.98
HDAC1-201ENST00000373548 GTF2A2P52657 109 aa21.17■□□□□ 0.98
HDAC1-201ENST00000373548 WNT7BP56706 349 aa21.17■□□□□ 0.98
HDAC1-201ENST00000373548 VSNL1P62760 191 aa21.17■□□□□ 0.98
HDAC1-201ENST00000373548 MKRN4PQ13434 485 aaPredicted RBP21.17■□□□□ 0.98
HDAC1-201ENST00000373548 TTLL4Q14679 1199 aa21.17■□□□□ 0.98
HDAC1-201ENST00000373548 PSMD6Q15008 389 aa21.17■□□□□ 0.98
HDAC1-201ENST00000373548 SLFN12LQ6IEE8 588 aa21.17■□□□□ 0.98
HDAC1-201ENST00000373548 CRELD2Q6UXH1 353 aaPredicted RBP21.17■□□□□ 0.98
HDAC1-201ENST00000373548 C15orf39Q6ZRI6 1047 aa21.17■□□□□ 0.98
HDAC1-201ENST00000373548 TPCN2Q8NHX9 752 aa21.17■□□□□ 0.98
HDAC1-201ENST00000373548 SHC3Q92529 594 aa21.17■□□□□ 0.98
HDAC1-201ENST00000373548 ZNF516Q92618 1163 aa21.17■□□□□ 0.98
HDAC1-201ENST00000373548 RNF216Q9NWF9 866 aaPredicted RBP21.17■□□□□ 0.98
HDAC1-201ENST00000373548 TAS2R14Q9NYV8 317 aa21.17■□□□□ 0.98
HDAC1-201ENST00000373548 SMARCAL1Q9NZC9 954 aa21.17■□□□□ 0.98
HDAC1-201ENST00000373548 EHD2Q9NZN4 543 aa21.17■□□□□ 0.98
HDAC1-201ENST00000373548 PACSIN2Q9UNF0 486 aaPredicted RBP21.17■□□□□ 0.98
HDAC1-201ENST00000373548 ACOT2P49753 483 aa21.16■□□□□ 0.98
HDAC1-201ENST00000373548 MFAP3P55082 362 aa21.16■□□□□ 0.98
HDAC1-201ENST00000373548 CLDN10P78369 228 aa21.16■□□□□ 0.98
HDAC1-201ENST00000373548 ITIH3Q06033 890 aa21.16■□□□□ 0.98
HDAC1-201ENST00000373548 ZNF792Q3KQV3 632 aa21.16■□□□□ 0.98
HDAC1-201ENST00000373548 IER5Q5VY09 327 aa21.16■□□□□ 0.98
HDAC1-201ENST00000373548 SCFD2Q8WU76 684 aa21.16■□□□□ 0.98
HDAC1-201ENST00000373548 NT5C1BQ96P26 610 aa21.16■□□□□ 0.98
HDAC1-201ENST00000373548 NCANO14594 1321 aa21.16■□□□□ 0.98
HDAC1-201ENST00000373548 TMEM253P0C7T8 217 aa21.16■□□□□ 0.98
HDAC1-201ENST00000373548 USP8P40818 1118 aa21.16■□□□□ 0.98
HDAC1-201ENST00000373548 CBX1P83916 185 aa21.16■□□□□ 0.98
HDAC1-201ENST00000373548 PRPF4BQ13523 1007 aaKnown RBP21.16■□□□□ 0.98
HDAC1-201ENST00000373548 GOLPH3Q9H4A6 298 aa21.16■□□□□ 0.98
HDAC1-201ENST00000373548 SUGCTQ9HAC7 445 aa21.16■□□□□ 0.98
HDAC1-201ENST00000373548 SEPT11Q9NVA2 429 aaKnown RBP21.16■□□□□ 0.98
HDAC1-201ENST00000373548 DIS3Q9Y2L1 958 aaKnown RBP21.16■□□□□ 0.98
HDAC1-201ENST00000373548 A0A0B4J269 797 aa21.15■□□□□ 0.98
HDAC1-201ENST00000373548 IGKV6-21A0A0C4DH24 114 aa21.15■□□□□ 0.98
HDAC1-201ENST00000373548 TBC1D8O95759 1140 aa21.15■□□□□ 0.98
HDAC1-201ENST00000373548 ADORA2AP29274 412 aa21.15■□□□□ 0.98
HDAC1-201ENST00000373548 CCDC181Q5TID7 509 aa21.15■□□□□ 0.98
HDAC1-201ENST00000373548 SPATA4Q8NEY3 305 aa21.15■□□□□ 0.98
HDAC1-201ENST00000373548 HNRNPLLQ8WVV9 542 aaKnown RBP21.15■□□□□ 0.98
HDAC1-201ENST00000373548 ELMO3Q96BJ8 720 aa21.15■□□□□ 0.98
HDAC1-201ENST00000373548 ANKFY1Q9P2R3 1169 aa21.15■□□□□ 0.98
HDAC1-201ENST00000373548 NOCTQ9UK39 431 aaKnown RBP21.15■□□□□ 0.98
HDAC1-201ENST00000373548 ADGRA2Q96PE1 1338 aa21.15■□□□□ 0.98
HDAC1-201ENST00000373548 SGPL1O95470 568 aa21.14■□□□□ 0.98
HDAC1-201ENST00000373548 TUBBP07437 444 aa21.14■□□□□ 0.98
HDAC1-201ENST00000373548 DNA2P51530 1060 aa21.14■□□□□ 0.98
HDAC1-201ENST00000373548 ZBTB41Q5SVQ8 909 aa21.14■□□□□ 0.98
HDAC1-201ENST00000373548 LMBRD2Q68DH5 695 aaPredicted RBP21.14■□□□□ 0.98
HDAC1-201ENST00000373548 WDR93Q6P2C0 686 aa21.14■□□□□ 0.98
HDAC1-201ENST00000373548 LRRC71Q8N4P6 559 aa21.14■□□□□ 0.98
HDAC1-201ENST00000373548 MMGT1Q8N4V1 131 aa21.14■□□□□ 0.98
HDAC1-201ENST00000373548 EPS8L1Q8TE68 723 aa21.14■□□□□ 0.98
HDAC1-201ENST00000373548 TATDN2Q93075 761 aa21.14■□□□□ 0.98
HDAC1-201ENST00000373548 MS4A14Q96JA4 679 aa21.14■□□□□ 0.98
HDAC1-201ENST00000373548 MSTO1Q9BUK6 570 aa21.14■□□□□ 0.98
HDAC1-201ENST00000373548 SMARCAD1Q9H4L7 1026 aa21.14■□□□□ 0.98
HDAC1-201ENST00000373548 GBA2Q9HCG7 927 aaPredicted RBP21.14■□□□□ 0.98
HDAC1-201ENST00000373548 PDE11AQ9HCR9 933 aa21.14■□□□□ 0.98
HDAC1-201ENST00000373548 TTLL13PA6NNM8 815 aa21.14■□□□□ 0.97
HDAC1-201ENST00000373548 CYP26A1O43174 497 aa21.14■□□□□ 0.97
HDAC1-201ENST00000373548 GAS2O43903 313 aaKnown RBP21.14■□□□□ 0.97
HDAC1-201ENST00000373548 FKBP1BP68106 108 aa21.14■□□□□ 0.97
HDAC1-201ENST00000373548 LAMTOR4Q0VGL1 99 aa21.14■□□□□ 0.97
HDAC1-201ENST00000373548 LONRF2Q1L5Z9 754 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms