RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 FNIP1Q8TF40 1166 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 ZNF862O60290 1169 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 NPR3P17342 541 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 TOR1AIP2Q8NFQ8 470 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 DHX36Q9H2U1 1008 aaKnown RBP7.41□□□□□ -1.22
CSMD2-206ENST00000373388 HERC5Q9UII4 1024 aaKnown RBP7.41□□□□□ -1.22
CSMD2-206ENST00000373388 RNF103O00237 685 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 PDZK1Q5T2W1 519 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 CWF19L1Q69YN2 538 aaKnown RBP7.41□□□□□ -1.22
CSMD2-206ENST00000373388 TTBK2Q6IQ55 1244 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 C11orf88Q6PI97 169 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 MAGEB6Q8N7X4 407 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 ZNF713Q8N859 430 aaPredicted RBP7.41□□□□□ -1.22
CSMD2-206ENST00000373388 KCNH5Q8NCM2 988 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 NCOA5Q9HCD5 579 aaKnown RBP7.41□□□□□ -1.22
CSMD2-206ENST00000373388 ING3Q9NXR8 418 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 RRN3Q9NYV6 651 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 MYRFQ9Y2G1 1151 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 MYH7BA7E2Y1 1941 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 PEX5P50542 639 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 POLR2FP61218 127 aaKnown RBP7.41□□□□□ -1.22
CSMD2-206ENST00000373388 SH3BP5LQ7L8J4 393 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 FAM32AQ9Y421 112 aaKnown RBP7.41□□□□□ -1.22
CSMD2-206ENST00000373388 ABCC2Q92887 1545 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 SNAP23O00161 211 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 IL12AP29459 219 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 CXCR5P32302 372 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 OASLQ15646 514 aaKnown RBP7.41□□□□□ -1.22
CSMD2-206ENST00000373388 C11orf57Q6ZUT1 292 aaPredicted RBP7.41□□□□□ -1.22
CSMD2-206ENST00000373388 GATAD2AQ86YP4 633 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 SPAG16Q8N0X2 631 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 KLHL3Q9UH77 587 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 DSEQ9UL01 958 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 ZBTB21Q9ULJ3 1066 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 THOC2Q8NI27 1593 aaKnown RBP7.41□□□□□ -1.22
CSMD2-206ENST00000373388 TPRP12270 2363 aaKnown RBP7.41□□□□□ -1.22
CSMD2-206ENST00000373388 MAGEB16A2A368 324 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 TRIM64CA6NLI5 447 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 ENO1P06733 434 aaKnown RBP7.41□□□□□ -1.22
CSMD2-206ENST00000373388 ZNF280DQ6N043 979 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 LVRNQ6Q4G3 990 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 P3H2Q8IVL5 708 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 SVOPQ8N4V2 548 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 FOXP1Q9H334 677 aaPredicted RBP7.41□□□□□ -1.22
CSMD2-206ENST00000373388 L2HGDHQ9H9P8 463 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 COL4A3BPQ9Y5P4 624 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 FAM95CA0A1B0GW59 222 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 RPL5P46777 297 aaKnown RBP7.41□□□□□ -1.22
CSMD2-206ENST00000373388 ALCAMQ13740 583 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 TSHZ1Q6ZSZ6 1077 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 BBS7Q8IWZ6 715 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 SIRT1Q96EB6 747 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 PRRG3Q9BZD7 231 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 MLXQ9UH92 298 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 FAM92AA1XBS5 289 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 PABPC1P11940 636 aaKnown RBP7.41□□□□□ -1.22
CSMD2-206ENST00000373388 RFT1Q96AA3 541 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 CD19P15391 556 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 FAPQ12884 760 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 ZNF658Q5TYW1 1059 aaPredicted RBP7.41□□□□□ -1.22
CSMD2-206ENST00000373388 IZUMO2Q6UXV1 221 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 POLNQ7Z5Q5 900 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 SERHL2Q9H4I8 314 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 SERHLQ9NQF3 203 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 WASLO00401 505 aaPredicted RBP7.41□□□□□ -1.22
CSMD2-206ENST00000373388 SEC24DO94855 1032 aaPredicted RBP7.41□□□□□ -1.22
CSMD2-206ENST00000373388 MOCS3O95396 460 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 GSPT1P15170 499 aaKnown RBP7.41□□□□□ -1.22
CSMD2-206ENST00000373388 DNAJC3Q13217 504 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 TTC6Q86TZ1 520 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 SCUBE1Q8IWY4 988 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 BBS5Q8N3I7 341 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 LGALS16A8MUM7 142 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 CDC40O60508 579 aaKnown RBP eCLIP7.41□□□□□ -1.22
CSMD2-206ENST00000373388 TSC22D2O75157 780 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 PUM3Q15397 648 aaKnown RBP7.41□□□□□ -1.22
CSMD2-206ENST00000373388 MZT2BQ6NZ67 158 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 FAM173BQ6P4H8 233 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 TTC8Q8TAM2 541 aa7.41□□□□□ -1.22
CSMD2-206ENST00000373388 MYH3P11055 1940 aa7.4□□□□□ -1.22
CSMD2-206ENST00000373388 ASS1P00966 412 aaKnown RBP7.4□□□□□ -1.22
CSMD2-206ENST00000373388 PTPN4P29074 926 aa7.4□□□□□ -1.22
CSMD2-206ENST00000373388 CHRNA2Q15822 529 aa7.4□□□□□ -1.22
CSMD2-206ENST00000373388 OR8H2Q8N162 312 aa7.4□□□□□ -1.22
CSMD2-206ENST00000373388 SPATA5Q8NB90 893 aa7.4□□□□□ -1.22
CSMD2-206ENST00000373388 MXD3Q9BW11 206 aa7.4□□□□□ -1.22
CSMD2-206ENST00000373388 RUBCNLQ9H714 662 aa7.4□□□□□ -1.22
CSMD2-206ENST00000373388 SAYSD1Q9NPB0 183 aa7.4□□□□□ -1.22
CSMD2-206ENST00000373388 PICALMQ13492 652 aa7.4□□□□□ -1.22
CSMD2-206ENST00000373388 POP5Q969H6 163 aaKnown RBP7.4□□□□□ -1.22
CSMD2-206ENST00000373388 CDHR1Q96JP9 859 aa7.4□□□□□ -1.22
CSMD2-206ENST00000373388 THTPAQ9BU02 230 aa7.4□□□□□ -1.22
CSMD2-206ENST00000373388 PNMA2Q9UL42 364 aa7.4□□□□□ -1.22
CSMD2-206ENST00000373388 AK5Q9Y6K8 562 aa7.4□□□□□ -1.22
CSMD2-206ENST00000373388 CCDC182A6NF36 153 aa7.4□□□□□ -1.22
CSMD2-206ENST00000373388 XIAPP98170 497 aa7.4□□□□□ -1.22
CSMD2-206ENST00000373388 RESTQ13127 1097 aa7.4□□□□□ -1.22
CSMD2-206ENST00000373388 THOC5Q13769 683 aaKnown RBP7.4□□□□□ -1.22
CSMD2-206ENST00000373388 KIF22Q14807 665 aa7.4□□□□□ -1.22
CSMD2-206ENST00000373388 TAF12Q16514 161 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms