RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 RABL2AQ9UBK7 228 aaPredicted RBP7□□□□□ -1.29
CHD6-203ENST00000373233 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7□□□□□ -1.29
CHD6-203ENST00000373233 DCAF17Q5H9S7 520 aaPredicted RBP7□□□□□ -1.29
CHD6-203ENST00000373233 CEP78Q5JTW2 689 aa7□□□□□ -1.29
CHD6-203ENST00000373233 EPC1Q9H2F5 836 aa7□□□□□ -1.29
CHD6-203ENST00000373233 HOXA13P31271 388 aaPredicted RBP7□□□□□ -1.29
CHD6-203ENST00000373233 EZH1Q92800 747 aaPredicted RBP7□□□□□ -1.29
CHD6-203ENST00000373233 AKT1S1Q96B36 256 aa7□□□□□ -1.29
CHD6-203ENST00000373233 MCRS1Q96EZ8 462 aa7□□□□□ -1.29
CHD6-203ENST00000373233 TSPAN18Q96SJ8 248 aa7□□□□□ -1.29
CHD6-203ENST00000373233 MAK16Q9BXY0 300 aaKnown RBP7□□□□□ -1.29
CHD6-203ENST00000373233 FAM205CA6NFA0 338 aa7□□□□□ -1.29
CHD6-203ENST00000373233 PLCG1P19174 1290 aa7□□□□□ -1.29
CHD6-203ENST00000373233 FMR1NBQ8N0W7 255 aaPredicted RBP7□□□□□ -1.29
CHD6-203ENST00000373233 TNIP2Q8NFZ5 429 aa7□□□□□ -1.29
CHD6-203ENST00000373233 TUBGCP3Q96CW5 907 aa7□□□□□ -1.29
CHD6-203ENST00000373233 EURLQ9NYK6 297 aa7□□□□□ -1.29
CHD6-203ENST00000373233 ATP6V1HQ9UI12 483 aa7□□□□□ -1.29
CHD6-203ENST00000373233 BUB1O43683 1085 aa7□□□□□ -1.29
CHD6-203ENST00000373233 CALUO43852 315 aaPredicted RBP7□□□□□ -1.29
CHD6-203ENST00000373233 PTPREP23469 700 aa7□□□□□ -1.29
CHD6-203ENST00000373233 GSTT1P30711 240 aa7□□□□□ -1.29
CHD6-203ENST00000373233 TYW1Q9NV66 732 aaKnown RBP7□□□□□ -1.29
CHD6-203ENST00000373233 ENTPD3O75355 529 aa7□□□□□ -1.29
CHD6-203ENST00000373233 ATP6V1B1P15313 513 aa7□□□□□ -1.29
CHD6-203ENST00000373233 S100A5P33763 92 aa7□□□□□ -1.29
CHD6-203ENST00000373233 MAN1A1P33908 653 aa7□□□□□ -1.29
CHD6-203ENST00000373233 VSNL1P62760 191 aa7□□□□□ -1.29
CHD6-203ENST00000373233 MKRN3Q13064 507 aaKnown RBP7□□□□□ -1.29
CHD6-203ENST00000373233 GRK7Q8WTQ7 553 aa7□□□□□ -1.29
CHD6-203ENST00000373233 TRAPPC9Q96Q05 1148 aa7□□□□□ -1.29
CHD6-203ENST00000373233 MAP3K14Q99558 947 aa7□□□□□ -1.29
CHD6-203ENST00000373233 ANO3Q9BYT9 981 aa7□□□□□ -1.29
CHD6-203ENST00000373233 C6orf203Q9P0P8 240 aaPredicted RBP7□□□□□ -1.29
CHD6-203ENST00000373233 PCDHA6Q9UN73 950 aa7□□□□□ -1.29
CHD6-203ENST00000373233 PCDHA8Q9Y5H6 950 aa7□□□□□ -1.29
CHD6-203ENST00000373233 EPN1Q9Y6I3 576 aaPredicted RBP7□□□□□ -1.29
CHD6-203ENST00000373233 XPO1O14980 1071 aaKnown RBP7□□□□□ -1.29
CHD6-203ENST00000373233 LSP1P33241 339 aa7□□□□□ -1.29
CHD6-203ENST00000373233 NR1H3Q13133 447 aa7□□□□□ -1.29
CHD6-203ENST00000373233 PPP2R5CQ13362 524 aa7□□□□□ -1.29
CHD6-203ENST00000373233 DPY19L2Q6NUT2 758 aa7□□□□□ -1.29
CHD6-203ENST00000373233 SKA1Q96BD8 255 aa7□□□□□ -1.29
CHD6-203ENST00000373233 FHDC1Q9C0D6 1143 aaPredicted RBP7□□□□□ -1.29
CHD6-203ENST00000373233 CCT8L1PA6NM43 557 aa7□□□□□ -1.29
CHD6-203ENST00000373233 EPB41P11171 864 aaKnown RBP7□□□□□ -1.29
CHD6-203ENST00000373233 ADARP55265 1226 aaKnown RBP7□□□□□ -1.29
CHD6-203ENST00000373233 RSRC2Q7L4I2 434 aaKnown RBP7□□□□□ -1.29
CHD6-203ENST00000373233 DYMQ7RTS9 669 aa7□□□□□ -1.29
CHD6-203ENST00000373233 CORO1CQ9ULV4 474 aaPredicted RBP7□□□□□ -1.29
CHD6-203ENST00000373233 GOLGA8QA0A0J9YX86 632 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 GOLGA8OA6NCC3 632 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 GOLGA8NF8WBI6 632 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 FAM107AO95990 144 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 ASNSP08243 561 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 S100A1P23297 94 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 CACNA2D1P54289 1103 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 QRICH1Q2TAL8 776 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 TMEM260Q9NX78 707 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 BAG5Q9UL15 447 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 PCDHA5Q9Y5H7 936 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 GOLGA8TH3BQL2 631 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 ANP32DO95626 131 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 SLC7A5Q01650 507 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 KRT26Q7Z3Y9 468 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 MRPL44Q9H9J2 332 aaKnown RBP6.99□□□□□ -1.29
CHD6-203ENST00000373233 STX18Q9P2W9 335 aaKnown RBP6.99□□□□□ -1.29
CHD6-203ENST00000373233 COL24A1Q17RW2 1714 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 EXOC1LA0A1B0GW35 172 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 IREB2P48200 963 aaKnown RBP6.99□□□□□ -1.29
CHD6-203ENST00000373233 RASA3Q14644 834 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 KCTD21Q4G0X4 260 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 HERC4Q5GLZ8 1057 aaPredicted RBP6.99□□□□□ -1.29
CHD6-203ENST00000373233 HDDC2Q7Z4H3 204 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 AGBL3Q8NEM8 1001 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 UPF3AQ9H1J1 476 aaKnown RBP6.99□□□□□ -1.29
CHD6-203ENST00000373233 IPPQ9Y573 584 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 COL1A1P02452 1464 aaPredicted RBP6.99□□□□□ -1.29
CHD6-203ENST00000373233 CFLARO15519 480 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 MFAP3LO75121 409 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 KLHL30Q0D2K2 578 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 ASPHQ12797 758 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 SPATA1Q5VX52 437 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 CAPN12Q6ZSI9 719 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 ANKRD35Q8N283 1001 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 FMO2Q99518 471 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 UBE2OQ9C0C9 1292 aaKnown RBP6.99□□□□□ -1.29
CHD6-203ENST00000373233 OATP04181 439 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 VHLP40337 213 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 TRPM8Q7Z2W7 1104 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 PITPNM3Q9BZ71 974 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 TRPC7Q9HCX4 862 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 ARL2BPQ9Y2Y0 163 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 PLTPP55058 493 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 IQCB1Q15051 598 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 BTNL9Q6UXG8 535 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 PLD3Q8IV08 490 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 TMEM39BQ9GZU3 492 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 MTFR1LQ9H019 292 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 CCSER2Q9H7U1 834 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms