RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 EPSTI1Q96J88 318 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 HIC2Q96JB3 615 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 ZNF317Q96PQ6 595 aaPredicted RBP9.5□□□□□ -0.89
ATG4A-203ENST00000372232 SRPK1Q96SB4 655 aaKnown RBP9.5□□□□□ -0.89
ATG4A-203ENST00000372232 SPATA16Q9BXB7 569 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 RTFDC1Q9BY42 306 aaPredicted RBP9.5□□□□□ -0.89
ATG4A-203ENST00000372232 MIS12Q9H081 205 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 RAB17Q9H0T7 212 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 ECT2Q9H8V3 914 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 MKNK2Q9HBH9 465 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 DACH1Q9UI36 760 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 R3HDM2Q9Y2K5 976 aaKnown RBP9.5□□□□□ -0.89
ATG4A-203ENST00000372232 SPO11Q9Y5K1 396 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 CCDC85CA6NKD9 419 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 GCOM1H8Y6P7 765 aaPredicted RBP9.5□□□□□ -0.89
ATG4A-203ENST00000372232 WDR46O15213 610 aaKnown RBP9.5□□□□□ -0.89
ATG4A-203ENST00000372232 GABBR2O75899 941 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 NDUFA10O95299 355 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 ALDH2P05091 517 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 FAM153BP0C7A2 387 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 MYZAPP0CAP1 466 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 HSPA9P38646 679 aaKnown RBP9.5□□□□□ -0.89
ATG4A-203ENST00000372232 MORC3Q14149 939 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 AGERQ15109 404 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 ZNF174Q15697 407 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 FAM153CQ494X1 144 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 SLC44A4Q53GD3 710 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 TTC38Q5R3I4 469 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 DAB2IPQ5VWQ8 1189 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 IFT20Q8IY31 132 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 GRAMD1CQ8IYS0 662 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 TRIML1Q8N9V2 468 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 LENG1Q96BZ8 264 aaPredicted RBP9.5□□□□□ -0.89
ATG4A-203ENST00000372232 IQCDQ96DY2 449 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 ZFRQ96KR1 1074 aaKnown RBP9.5□□□□□ -0.89
ATG4A-203ENST00000372232 SNX27Q96L92 541 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 IFT74Q96LB3 600 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 FAM129AQ9BZQ8 928 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 TCP11L1Q9NUJ3 509 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 SUCLA2Q9P2R7 463 aaPredicted RBP9.5□□□□□ -0.89
ATG4A-203ENST00000372232 NKX1-2Q9UD57 310 aaPredicted RBP9.5□□□□□ -0.89
ATG4A-203ENST00000372232 ADD3Q9UEY8 706 aaKnown RBP9.5□□□□□ -0.89
ATG4A-203ENST00000372232 CNOT8Q9UFF9 292 aaKnown RBP9.5□□□□□ -0.89
ATG4A-203ENST00000372232 FAM153AQ9UHL3 310 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 GGA1Q9UJY5 639 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 ZMYND8Q9ULU4 1186 aaPredicted RBP9.5□□□□□ -0.89
ATG4A-203ENST00000372232 CHMP2BQ9UQN3 213 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 PLAAQ9Y263 795 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 LRCH1Q9Y2L9 728 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 LAMB1P07942 1786 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 SBF2Q86WG5 1849 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 A0A087X0B3 334 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 ENPP3O14638 875 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 BBOX1O75936 387 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 UBOX5O94941 541 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 ITGA2BP08514 1039 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 PDGFRBP09619 1106 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 TSPY3P0CV98 308 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 TSPY8P0CW00 308 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 PRLRP16471 622 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 TRIM21P19474 475 aaKnown RBP9.49□□□□□ -0.89
ATG4A-203ENST00000372232 TRAPPC10P48553 1259 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 PLCD1P51178 756 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 CACNA2D1P54289 1103 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 RAD23BP54727 409 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 ATP2C1P98194 919 aaPredicted RBP9.49□□□□□ -0.89
ATG4A-203ENST00000372232 BNIP1Q12981 228 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 KRT72Q14CN4 511 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 LINC01559Q495D7 138 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 SLC27A3Q5K4L6 730 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 ALKBH2Q6NS38 261 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 ENDOVQ8N8Q3 282 aaKnown RBP9.49□□□□□ -0.89
ATG4A-203ENST00000372232 CFAP61Q8NHU2 1237 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 ASAP3Q8TDY4 903 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 UCMAQ8WVF2 138 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 KLHL29Q96CT2 875 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 GPRASP2Q96D09 838 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 SLC10A4Q96EP9 437 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 DHTKD1Q96HY7 919 aaPredicted RBP9.49□□□□□ -0.89
ATG4A-203ENST00000372232 MAML3Q96JK9 1138 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 CATSPER2Q96P56 530 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 XPO6Q96QU8 1125 aaKnown RBP9.49□□□□□ -0.89
ATG4A-203ENST00000372232 TCHPQ9BT92 498 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 CNOT10Q9H9A5 744 aaKnown RBP9.49□□□□□ -0.89
ATG4A-203ENST00000372232 DDX56Q9NY93 547 aaKnown RBP9.49□□□□□ -0.89
ATG4A-203ENST00000372232 HESX1Q9UBX0 185 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 SNX12Q9UMY4 172 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 ITM2BQ9Y287 266 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 EPN1Q9Y6I3 576 aaPredicted RBP9.49□□□□□ -0.89
ATG4A-203ENST00000372232 CCDC88AQ3V6T2 1871 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 MYH8P13535 1937 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 ADAMTS3O15072 1205 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 CETN3O15182 167 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 TPBGLP0DKB5 382 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 HPCAP84074 193 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 AMPD3Q01432 767 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 GUCY2DQ02846 1103 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 GRM4Q14833 912 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 CFAP157Q5JU67 520 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 PACS1Q6VY07 963 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms