RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 DARS2Q6PI48 645 aaKnown RBP14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 STOX1Q6ZVD7 989 aa14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 HDAC11Q96DB2 347 aa14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 PIDD1Q9HB75 910 aa14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 DDX28Q9NUL7 540 aaKnown RBP14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 TBK1Q9UHD2 729 aa14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 PACSIN2Q9UNF0 486 aaPredicted RBP14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 ESYT2A0FGR8 921 aa14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 ATP5HO75947 161 aa14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 EXOSC10Q01780 885 aaKnown RBP14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 CLEC17AQ6ZS10 378 aa14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 POLD4Q9HCU8 107 aa14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 ABHD10Q9NUJ1 306 aa14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 ADGRB1O14514 1584 aa14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 DEPDC5O75140 1603 aa14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 PDHBP11177 359 aa14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 EEF1DP29692 281 aaKnown RBP14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 GCLMP48507 274 aa14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 ZNF394Q53GI3 561 aa14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 CASP10Q92851 521 aa14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 ELAC2Q9BQ52 826 aaKnown RBP14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 YIPF3Q9GZM5 350 aa14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 DNAJC12Q9UKB3 198 aa14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 NR3C2P08235 984 aa14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 MMEP08473 750 aa14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 ITGB3BPQ13352 177 aaPredicted RBP14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 GANCQ8TET4 914 aa14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 MROH2AA6NES4 1674 aa14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 EYA4O95677 639 aa14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 RNF149Q8NC42 400 aa14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 SEPT1Q8WYJ6 367 aa14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 LMCD1Q9NZU5 365 aa14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 PIN4Q9Y237 131 aaKnown RBP14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 COL5A2P05997 1499 aaPredicted RBP14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 NBNO60934 754 aa14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 VAMP7P51809 220 aa14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 RWDD2BP57060 319 aa14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 STX3Q13277 289 aa14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 RAPH1Q70E73 1250 aa14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 ZKSCAN4Q969J2 545 aaPredicted RBP14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 PPWD1Q96BP3 646 aaKnown RBP14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 TIPINQ9BVW5 301 aa14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 MAP3K20Q9NYL2 800 aaKnown RBP14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 TMEM191CA6NGB0 347 aa14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 PODXLO00592 558 aa14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 KRT8P05787 483 aa14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 CDO1Q16878 200 aa14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 XKR3Q5GH77 459 aa14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 NUGGCQ68CJ6 796 aa14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 GPD1LQ8N335 351 aa14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 SERPINI1Q99574 410 aa14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 SESN1Q9Y6P5 492 aa14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 TBXAS1P24557 533 aaPredicted RBP14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 PSMA2P25787 234 aa14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 RWDD4Q6NW29 188 aaKnown RBP14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 IGDCC4Q8TDY8 1250 aa14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 EPB41L4AQ9HCS5 686 aaPredicted RBP14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 DKK3Q9UBP4 350 aa14.14□□□□□ -0.15
RAPGEF1-201ENST00000372189 TADA3O75528 432 aa14.13□□□□□ -0.15
RAPGEF1-201ENST00000372189 PLS3P13797 630 aa14.13□□□□□ -0.15
RAPGEF1-201ENST00000372189 GUCY1A2P33402 732 aa14.13□□□□□ -0.15
RAPGEF1-201ENST00000372189 PPP4CP60510 307 aa14.13□□□□□ -0.15
RAPGEF1-201ENST00000372189 ATG16L1Q676U5 607 aa14.13□□□□□ -0.15
RAPGEF1-201ENST00000372189 NANOGNBQ7Z5D8 188 aa14.13□□□□□ -0.15
RAPGEF1-201ENST00000372189 LZICQ8WZA0 190 aa14.13□□□□□ -0.15
RAPGEF1-201ENST00000372189 PDS5AQ29RF7 1337 aaKnown RBP14.13□□□□□ -0.15
RAPGEF1-201ENST00000372189 PPLO60437 1756 aa14.13□□□□□ -0.15
RAPGEF1-201ENST00000372189 TTI1O43156 1089 aa14.13□□□□□ -0.15
RAPGEF1-201ENST00000372189 EPHB1P54762 984 aa14.13□□□□□ -0.15
RAPGEF1-201ENST00000372189 KIF12Q96FN5 646 aa14.13□□□□□ -0.15
RAPGEF1-201ENST00000372189 PRMT6Q96LA8 375 aaPredicted RBP14.13□□□□□ -0.15
RAPGEF1-201ENST00000372189 PRKCBP05771 671 aa14.13□□□□□ -0.15
RAPGEF1-201ENST00000372189 ATP2C1P98194 919 aaPredicted RBP14.13□□□□□ -0.15
RAPGEF1-201ENST00000372189 RNF219Q5W0B1 726 aaPredicted RBP14.13□□□□□ -0.15
RAPGEF1-201ENST00000372189 RAB44Q7Z6P3 723 aaPredicted RBP14.13□□□□□ -0.15
RAPGEF1-201ENST00000372189 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.13□□□□□ -0.15
RAPGEF1-201ENST00000372189 UBE2OQ9C0C9 1292 aaKnown RBP14.13□□□□□ -0.15
RAPGEF1-201ENST00000372189 PP2D1A8MPX8 630 aa14.13□□□□□ -0.15
RAPGEF1-201ENST00000372189 TSTA3Q13630 321 aaPredicted RBP14.13□□□□□ -0.15
RAPGEF1-201ENST00000372189 DNAAF3Q8N9W5 541 aa14.13□□□□□ -0.15
RAPGEF1-201ENST00000372189 ZDHHC15Q96MV8 337 aa14.13□□□□□ -0.15
RAPGEF1-201ENST00000372189 ACAP3Q96P50 834 aa14.13□□□□□ -0.15
RAPGEF1-201ENST00000372189 PPP2R3BQ9Y5P8 575 aa14.13□□□□□ -0.15
RAPGEF1-201ENST00000372189 hCG_2014768A0A024R1R8 64 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 MAFGO15525 162 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 TRPA1O75762 1119 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 AP3M2P53677 418 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 PDIA5Q14554 519 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 IER5Q5VY09 327 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 TMEM270Q6UE05 265 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 TTC39CQ8N584 583 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 SLIT1O75093 1534 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 IQANK1A0A1B0GTG1 560 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 TPP2P29144 1249 aaPredicted RBP14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 MXD4Q14582 209 aaPredicted RBP14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 SKIV2LQ15477 1246 aaKnown RBP14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 ATAD3BQ5T9A4 648 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 RHOT2Q8IXI1 618 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 SIX5Q8N196 739 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 TMEM35BQ8NCS4 154 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms