RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 SPATA31D4Q6ZUB0 917 aa14.6□□□□□ -0.07
RPF1-201ENST00000370654 CNNM3Q8NE01 707 aa14.6□□□□□ -0.07
RPF1-201ENST00000370654 RPS6KC1Q96S38 1066 aa14.6□□□□□ -0.07
RPF1-201ENST00000370654 KIF2CQ99661 725 aa14.6□□□□□ -0.07
RPF1-201ENST00000370654 GPR62Q9BZJ7 368 aa14.6□□□□□ -0.07
RPF1-201ENST00000370654 MRPL17Q9NRX2 175 aaKnown RBP14.6□□□□□ -0.07
RPF1-201ENST00000370654 SORCS3Q9UPU3 1222 aa14.6□□□□□ -0.07
RPF1-201ENST00000370654 TDRD15B5MCY1 1934 aaKnown RBP14.6□□□□□ -0.07
RPF1-201ENST00000370654 LRRIQ4A6NIV6 560 aa14.6□□□□□ -0.07
RPF1-201ENST00000370654 TRIM29Q14134 588 aa14.6□□□□□ -0.07
RPF1-201ENST00000370654 ZDHHC14Q8IZN3 488 aa14.6□□□□□ -0.07
RPF1-201ENST00000370654 TDRD5Q8NAT2 981 aaKnown RBP14.6□□□□□ -0.07
RPF1-201ENST00000370654 CCDC51Q96ER9 411 aa14.6□□□□□ -0.07
RPF1-201ENST00000370654 EMILIN2Q9BXX0 1053 aa14.6□□□□□ -0.07
RPF1-201ENST00000370654 NFKBIZQ9BYH8 718 aa14.6□□□□□ -0.07
RPF1-201ENST00000370654 SFXN1Q9H9B4 322 aa14.6□□□□□ -0.07
RPF1-201ENST00000370654 UBN1Q9NPG3 1134 aa14.6□□□□□ -0.07
RPF1-201ENST00000370654 MAN1C1Q9NR34 630 aa14.6□□□□□ -0.07
RPF1-201ENST00000370654 RFPL2O75678 378 aa14.59□□□□□ -0.07
RPF1-201ENST00000370654 URODP06132 367 aa14.59□□□□□ -0.07
RPF1-201ENST00000370654 XRCC6P12956 609 aaKnown RBP eCLIP14.59□□□□□ -0.07
RPF1-201ENST00000370654 RPL17P18621 184 aaKnown RBP14.59□□□□□ -0.07
RPF1-201ENST00000370654 DSG1Q02413 1049 aa14.59□□□□□ -0.07
RPF1-201ENST00000370654 PCBP1Q15365 356 aaKnown RBP eCLIP14.59□□□□□ -0.07
RPF1-201ENST00000370654 CDCA2Q69YH5 1023 aaPredicted RBP14.59□□□□□ -0.07
RPF1-201ENST00000370654 SLC27A1Q6PCB7 646 aa14.59□□□□□ -0.07
RPF1-201ENST00000370654 PPFIBP1Q86W92 1011 aa14.59□□□□□ -0.07
RPF1-201ENST00000370654 GLYCTKQ8IVS8 523 aa14.59□□□□□ -0.07
RPF1-201ENST00000370654 C4orf32Q8N8J7 132 aa14.59□□□□□ -0.07
RPF1-201ENST00000370654 TMEM105Q8N8V8 129 aa14.59□□□□□ -0.07
RPF1-201ENST00000370654 KIFC3Q9BVG8 833 aa14.59□□□□□ -0.07
RPF1-201ENST00000370654 FZD8Q9H461 694 aa14.59□□□□□ -0.07
RPF1-201ENST00000370654 RXFP1Q9HBX9 757 aa14.59□□□□□ -0.07
RPF1-201ENST00000370654 TUFT1Q9NNX1 390 aa14.59□□□□□ -0.07
RPF1-201ENST00000370654 CHST7Q9NS84 486 aa14.59□□□□□ -0.07
RPF1-201ENST00000370654 PARP2Q9UGN5 583 aa14.59□□□□□ -0.07
RPF1-201ENST00000370654 LIMCH1Q9UPQ0 1083 aa14.59□□□□□ -0.07
RPF1-201ENST00000370654 GIT1Q9Y2X7 761 aa14.59□□□□□ -0.07
RPF1-201ENST00000370654 CARNS1A5YM72 827 aa14.58□□□□□ -0.08
RPF1-201ENST00000370654 GLUD2P49448 558 aa14.58□□□□□ -0.08
RPF1-201ENST00000370654 MTMR3Q13615 1198 aa14.58□□□□□ -0.08
RPF1-201ENST00000370654 EEF1DP3Q658K8 133 aa14.58□□□□□ -0.08
RPF1-201ENST00000370654 PADI6Q6TGC4 694 aa14.58□□□□□ -0.08
RPF1-201ENST00000370654 PALB2Q86YC2 1186 aa14.58□□□□□ -0.08
RPF1-201ENST00000370654 ST13P5Q8NFI4 369 aaPredicted RBP14.58□□□□□ -0.08
RPF1-201ENST00000370654 HASPINQ8TF76 798 aa14.58□□□□□ -0.08
RPF1-201ENST00000370654 RSAD2Q8WXG1 361 aa14.58□□□□□ -0.08
RPF1-201ENST00000370654 ZNF707Q96C28 371 aaPredicted RBP14.58□□□□□ -0.08
RPF1-201ENST00000370654 C8orf76Q96K31 380 aa14.58□□□□□ -0.08
RPF1-201ENST00000370654 CCDC43Q96MW1 224 aaKnown RBP14.58□□□□□ -0.08
RPF1-201ENST00000370654 POLR3CQ9BUI4 534 aaPredicted RBP14.58□□□□□ -0.08
RPF1-201ENST00000370654 TRIM6Q9C030 488 aaPredicted RBP14.58□□□□□ -0.08
RPF1-201ENST00000370654 PDZD7Q9H5P4 517 aa14.58□□□□□ -0.08
RPF1-201ENST00000370654 USTQ9Y2C2 406 aa14.58□□□□□ -0.08
RPF1-201ENST00000370654 CCDC195A0A1B0GUA6 201 aa14.57□□□□□ -0.08
RPF1-201ENST00000370654 PTGESO14684 152 aa14.57□□□□□ -0.08
RPF1-201ENST00000370654 OR52Z1P0C646 297 aa14.57□□□□□ -0.08
RPF1-201ENST00000370654 LIG1P18858 919 aa14.57□□□□□ -0.08
RPF1-201ENST00000370654 PTPN5P54829 565 aa14.57□□□□□ -0.08
RPF1-201ENST00000370654 NAB2Q15742 525 aa14.57□□□□□ -0.08
RPF1-201ENST00000370654 FUT10Q6P4F1 479 aa14.57□□□□□ -0.08
RPF1-201ENST00000370654 PRSS55Q6UWB4 352 aaPredicted RBP14.57□□□□□ -0.08
RPF1-201ENST00000370654 NOSTRINQ8IVI9 506 aa14.57□□□□□ -0.08
RPF1-201ENST00000370654 UBALD2Q8IYN6 164 aa14.57□□□□□ -0.08
RPF1-201ENST00000370654 NACC1Q96RE7 527 aa14.57□□□□□ -0.08
RPF1-201ENST00000370654 COLEC11Q9BWP8 271 aa14.57□□□□□ -0.08
RPF1-201ENST00000370654 CCDC113Q9H0I3 377 aa14.57□□□□□ -0.08
RPF1-201ENST00000370654 SNTG2Q9NY99 539 aa14.57□□□□□ -0.08
RPF1-201ENST00000370654 CASTOR2A6NHX0 329 aa14.56□□□□□ -0.08
RPF1-201ENST00000370654 SPDYE4A6NLX3 237 aa14.56□□□□□ -0.08
RPF1-201ENST00000370654 H0Y858 1186 aa14.56□□□□□ -0.08
RPF1-201ENST00000370654 TGM5O43548 720 aa14.56□□□□□ -0.08
RPF1-201ENST00000370654 NARSO43776 548 aaKnown RBP14.56□□□□□ -0.08
RPF1-201ENST00000370654 CYP11B2P19099 503 aa14.56□□□□□ -0.08
RPF1-201ENST00000370654 RPA1P27694 616 aa14.56□□□□□ -0.08
RPF1-201ENST00000370654 TOB1P50616 345 aaPredicted RBP14.56□□□□□ -0.08
RPF1-201ENST00000370654 NCBP1Q09161 790 aaKnown RBP14.56□□□□□ -0.08
RPF1-201ENST00000370654 FAM187BQ17R55 369 aa14.56□□□□□ -0.08
RPF1-201ENST00000370654 RTP2Q5QGT7 225 aa14.56□□□□□ -0.08
RPF1-201ENST00000370654 TTC38Q5R3I4 469 aa14.56□□□□□ -0.08
RPF1-201ENST00000370654 CCDC149Q6ZUS6 474 aa14.56□□□□□ -0.08
RPF1-201ENST00000370654 FBXO18Q8NFZ0 1043 aa14.56□□□□□ -0.08
RPF1-201ENST00000370654 RIN2Q8WYP3 895 aaPredicted RBP14.56□□□□□ -0.08
RPF1-201ENST00000370654 FOXP1Q9H334 677 aaPredicted RBP14.56□□□□□ -0.08
RPF1-201ENST00000370654 KCNK12Q9HB15 430 aa14.56□□□□□ -0.08
RPF1-201ENST00000370654 DOCK6Q96HP0 2047 aa14.55□□□□□ -0.08
RPF1-201ENST00000370654 ADAM12O43184 909 aa14.55□□□□□ -0.08
RPF1-201ENST00000370654 PI15O43692 258 aa14.55□□□□□ -0.08
RPF1-201ENST00000370654 GLUD1P00367 558 aa14.55□□□□□ -0.08
RPF1-201ENST00000370654 ADH1AP07327 375 aa14.55□□□□□ -0.08
RPF1-201ENST00000370654 NPR3P17342 541 aa14.55□□□□□ -0.08
RPF1-201ENST00000370654 GRIK3Q13003 919 aa14.55□□□□□ -0.08
RPF1-201ENST00000370654 SAFBQ15424 915 aaKnown RBP eCLIP14.55□□□□□ -0.08
RPF1-201ENST00000370654 IL17AQ16552 155 aa14.55□□□□□ -0.08
RPF1-201ENST00000370654 NT5DC1Q5TFE4 455 aa14.55□□□□□ -0.08
RPF1-201ENST00000370654 CWF19L1Q69YN2 538 aaKnown RBP14.55□□□□□ -0.08
RPF1-201ENST00000370654 LILRA6Q6PI73 481 aa14.55□□□□□ -0.08
RPF1-201ENST00000370654 C15orf39Q6ZRI6 1047 aa14.55□□□□□ -0.08
RPF1-201ENST00000370654 PLCD3Q8N3E9 789 aa14.55□□□□□ -0.08
RPF1-201ENST00000370654 MCPH1Q8NEM0 835 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms