RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 HIBADHP31937 336 aaKnown RBP4.31□□□□□ -1.72
MCF2-203ENST00000370576 YBEYP58557 167 aaPredicted RBP4.31□□□□□ -1.72
MCF2-203ENST00000370576 HTRA3P83110 453 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 PLIN5Q00G26 463 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 C17orf67Q0P5P2 114 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 GALNT1Q10472 559 aaPredicted RBP4.31□□□□□ -1.72
MCF2-203ENST00000370576 TTC39AQ5SRH9 613 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 CNSTQ6PJW8 725 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 CCDC13Q8IYE1 715 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 CACNA2D3Q8IZS8 1091 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 PCSK9Q8NBP7 692 aaKnown RBP4.31□□□□□ -1.72
MCF2-203ENST00000370576 CLIP3Q96DZ5 547 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 MRPL4Q9BYD3 311 aaKnown RBP4.31□□□□□ -1.72
MCF2-203ENST00000370576 VCPKMTQ9H867 229 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 ZNF304Q9HCX3 659 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 C1orf112Q9NSG2 853 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 FAM50BQ9Y247 325 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.31□□□□□ -1.72
MCF2-203ENST00000370576 POLR2AP24928 1970 aaKnown RBP4.31□□□□□ -1.72
MCF2-203ENST00000370576 A0A087WV62 115 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 B2RBV5 119 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 F8W031 263 aaPredicted RBP4.31□□□□□ -1.72
MCF2-203ENST00000370576 NEMP1O14524 444 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 ASAP2O43150 1006 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 MLYCDO95822 493 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 OLFM2O95897 454 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 GJB1P08034 283 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 SYT1P21579 422 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 HOXD13P35453 343 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 MXI1P50539 228 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 PEX5P50542 639 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 FXR1P51114 621 aaKnown RBP eCLIP4.31□□□□□ -1.72
MCF2-203ENST00000370576 CCNA1P78396 465 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 CDC16Q13042 620 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 WTAPQ15007 396 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 TRADDQ15628 312 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 MAP3K11Q16584 847 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 APOA5Q6Q788 366 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 CWC27Q6UX04 472 aaKnown RBP4.31□□□□□ -1.72
MCF2-203ENST00000370576 FAM83AQ86UY5 434 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 LINC00469Q8N7U9 141 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 SPERTQ8NA61 448 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 AGBL3Q8NEM8 1001 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 PDCD2LQ9BRP1 358 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 WNT5BQ9H1J7 359 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 ZMAT3Q9HA38 289 aaKnown RBP4.31□□□□□ -1.72
MCF2-203ENST00000370576 CLDN16Q9Y5I7 305 aa4.31□□□□□ -1.72
MCF2-203ENST00000370576 ZFP37Q9Y6Q3 630 aaPredicted RBP4.31□□□□□ -1.72
MCF2-203ENST00000370576 RPTORQ8N122 1335 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 TSC2P49815 1807 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 CYP3A7-CYP3A51PA0A087WV96 503 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 TRIM75PA6NK02 468 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 F5H423 210 aaPredicted RBP4.3□□□□□ -1.72
MCF2-203ENST00000370576 OPA1O60313 960 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 ZPR1O75312 459 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 TADA3O75528 432 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 TMEM63AO94886 807 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 CYP3A7P24462 503 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 SLC12A2P55011 1212 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 PPARAQ07869 468 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 MAP3K12Q12852 859 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 MAP7Q14244 749 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 FLYWCH1Q4VC44 716 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 MUM1L1Q5H9M0 696 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 SH3BP5LQ7L8J4 393 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 SRGAP1Q7Z6B7 1085 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 LRRC49Q8IUZ0 686 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 SLC44A2Q8IWA5 706 aaPredicted RBP4.3□□□□□ -1.72
MCF2-203ENST00000370576 FAM133AQ8N9E0 248 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 SUPT20HQ8NEM7 779 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 C1orf162Q8NEQ5 155 aaPredicted RBP4.3□□□□□ -1.72
MCF2-203ENST00000370576 OR6C4Q8NGE1 309 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 TATDN2Q93075 761 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 HPS3Q969F9 1004 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 BTBD6Q96KE9 485 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 TEPSINQ96N21 525 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 PPP1R16BQ96T49 567 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 BAG1Q99933 345 aaPredicted RBP4.3□□□□□ -1.72
MCF2-203ENST00000370576 SLC39A3Q9BRY0 314 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 FOXP1Q9H334 677 aaPredicted RBP4.3□□□□□ -1.72
MCF2-203ENST00000370576 PRDM13Q9H4Q3 707 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 ITM2CQ9NQX7 267 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 UBP1Q9NZI7 540 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 MAD2L2Q9UI95 211 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 ANGEL1Q9UNK9 670 aaKnown RBP4.3□□□□□ -1.72
MCF2-203ENST00000370576 PARP3Q9Y6F1 533 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 LINC00854A0A1B0GVQ3 168 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 RRN3P2A6NIE6 340 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 TBKBP1A7MCY6 615 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 MPHOSPH10O00566 681 aaKnown RBP4.3□□□□□ -1.72
MCF2-203ENST00000370576 TUSC2O75896 110 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 SLITRK3O94933 977 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 SNX4O95219 450 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 YEATS4O95619 227 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 MCM5P33992 734 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 PPM1AP35813 382 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 HIRAP54198 1017 aaPredicted RBP4.3□□□□□ -1.72
MCF2-203ENST00000370576 AUHQ13825 339 aaKnown RBP4.3□□□□□ -1.72
MCF2-203ENST00000370576 PKP1Q13835 747 aa4.3□□□□□ -1.72
MCF2-203ENST00000370576 PPA1Q15181 289 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms