RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 KDM4CQ9H3R0 1056 aa9.06□□□□□ -0.96
LCA5-201ENST00000369846 STK17AQ9UEE5 414 aa9.06□□□□□ -0.96
LCA5-201ENST00000369846 DMGDHQ9UI17 866 aaKnown RBP9.06□□□□□ -0.96
LCA5-201ENST00000369846 SMG5Q9UPR3 1016 aaKnown RBP9.06□□□□□ -0.96
LCA5-201ENST00000369846 IPPQ9Y573 584 aa9.06□□□□□ -0.96
LCA5-201ENST00000369846 ARHGEF28Q8N1W1 1705 aaKnown RBP9.06□□□□□ -0.96
LCA5-201ENST00000369846 KPNA4O00629 521 aaPredicted RBP9.06□□□□□ -0.96
LCA5-201ENST00000369846 SMNDC1O75940 238 aaKnown RBP eCLIP9.06□□□□□ -0.96
LCA5-201ENST00000369846 CIITAP33076 1130 aa9.06□□□□□ -0.96
LCA5-201ENST00000369846 HSD17B3P37058 310 aa9.06□□□□□ -0.96
LCA5-201ENST00000369846 PRCPP42785 496 aa9.06□□□□□ -0.96
LCA5-201ENST00000369846 ARPC4P59998 168 aa9.06□□□□□ -0.96
LCA5-201ENST00000369846 LLGL2Q6P1M3 1020 aa9.06□□□□□ -0.96
LCA5-201ENST00000369846 POTEAQ6S8J7 498 aa9.06□□□□□ -0.96
LCA5-201ENST00000369846 AGAP11Q8TF27 550 aa9.06□□□□□ -0.96
LCA5-201ENST00000369846 TRAPPC9Q96Q05 1148 aa9.06□□□□□ -0.96
LCA5-201ENST00000369846 GLT8D2Q9H1C3 349 aa9.06□□□□□ -0.96
LCA5-201ENST00000369846 MAGEF1Q9HAY2 307 aa9.06□□□□□ -0.96
LCA5-201ENST00000369846 EMILIN3Q9NT22 766 aa9.06□□□□□ -0.96
LCA5-201ENST00000369846 TMOD4Q9NZQ9 345 aa9.06□□□□□ -0.96
LCA5-201ENST00000369846 TFR2Q9UP52 801 aa9.06□□□□□ -0.96
LCA5-201ENST00000369846 DIS3Q9Y2L1 958 aaKnown RBP9.06□□□□□ -0.96
LCA5-201ENST00000369846 USP32Q8NFA0 1604 aa9.06□□□□□ -0.96
LCA5-201ENST00000369846 GOLGA8CPA6NN73 597 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 ATP6V1E1P36543 226 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 POU5F1BQ06416 359 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 INPP5AQ14642 412 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 ADRM1Q16186 407 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 IRGCQ6NXR0 463 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 CLVS1Q8IUQ0 354 aaPredicted RBP9.05□□□□□ -0.96
LCA5-201ENST00000369846 NFATC2IPQ8NCF5 419 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 ZNF555Q8NEP9 628 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 PHF21AQ96BD5 680 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 FAM149B1Q96BN6 582 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 PCIF1Q9H4Z3 704 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 DISC1Q9NRI5 854 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 HEY2Q9UBP5 337 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 SETBP1Q9Y6X0 1596 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 ORC4O43929 436 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 TBC1D12O60347 775 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 FSBPO95073 299 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 PLCG1P19174 1290 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 PIK3CAP42336 1068 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 ITGADQ13349 1161 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 NLRP9Q7RTR0 991 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 ANKMY2Q8IV38 441 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 REXO1L1PQ8IX06 675 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 ATP11CQ8NB49 1132 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 GLMNQ92990 594 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 TEX13AQ9BXU3 409 aaPredicted RBP9.05□□□□□ -0.96
LCA5-201ENST00000369846 HESX1Q9UBX0 185 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 GMEB1Q9Y692 573 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 TYK2P29597 1187 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 TUFMP49411 452 aaKnown RBP9.05□□□□□ -0.96
LCA5-201ENST00000369846 ALDH5A1P51649 535 aaPredicted RBP9.05□□□□□ -0.96
LCA5-201ENST00000369846 MAPK10P53779 464 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 MAPRE1Q15691 268 aaKnown RBP9.05□□□□□ -0.96
LCA5-201ENST00000369846 FAM102BQ5T8I3 360 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 RESP18Q5W5W9 173 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 ARID3BQ8IVW6 561 aaPredicted RBP9.05□□□□□ -0.96
LCA5-201ENST00000369846 ZC3H15Q8WU90 426 aaKnown RBP9.05□□□□□ -0.96
LCA5-201ENST00000369846 MKNK1Q9BUB5 465 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 BRIP1Q9BX63 1249 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 CELF4Q9BZC1 486 aaKnown RBP9.05□□□□□ -0.96
LCA5-201ENST00000369846 RABGEF1Q9UJ41 708 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 V9GYQ6 96 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 MAP2P11137 1827 aaKnown RBP9.05□□□□□ -0.96
LCA5-201ENST00000369846 PPLO60437 1756 aa9.05□□□□□ -0.96
LCA5-201ENST00000369846 BCL10O95999 233 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 MMP1P03956 469 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 PTPREP23469 700 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 IL12RB1P42701 662 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 LIG4P49917 911 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 YWHAEP62258 255 aaKnown RBP9.04□□□□□ -0.96
LCA5-201ENST00000369846 WDR93Q6P2C0 686 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 BARGINQ6ZT62 677 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 ZBTB46Q86UZ6 589 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 IFNL3Q8IZI9 196 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 SCG3Q8WXD2 468 aaKnown RBP9.04□□□□□ -0.96
LCA5-201ENST00000369846 RUBCNQ92622 972 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 VPS39Q96JC1 886 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 ANKRD27Q96NW4 1050 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 ZBTB18Q99592 522 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 CEP44Q9C0F1 390 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 CNOT8Q9UFF9 292 aaKnown RBP9.04□□□□□ -0.96
LCA5-201ENST00000369846 MTO1Q9Y2Z2 717 aaKnown RBP9.04□□□□□ -0.96
LCA5-201ENST00000369846 KAT6BQ8WYB5 2073 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 ARHGEF37A1IGU5 675 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 TJP3O95049 919 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 YY1P25490 414 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 RPS6KA3P51812 740 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 MTM1Q13496 603 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 DHX34Q14147 1143 aaKnown RBP9.04□□□□□ -0.96
LCA5-201ENST00000369846 ITIH4Q14624 930 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 ZNF746Q6NUN9 644 aaPredicted RBP9.04□□□□□ -0.96
LCA5-201ENST00000369846 LAYNQ6UX15 382 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 RNF19BQ6ZMZ0 732 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 OR8H2Q8N162 312 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 PNMA1Q8ND90 353 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 SLC10A4Q96EP9 437 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms