RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 NUCKS1Q9H1E3 243 aaKnown RBP18.25■□□□□ 0.51
PHGDH-202ENST00000369409 FZD8Q9H461 694 aa18.25■□□□□ 0.51
PHGDH-202ENST00000369409 NHEJ1Q9H9Q4 299 aaPredicted RBP18.25■□□□□ 0.51
PHGDH-202ENST00000369409 ARHGAP20Q9P2F6 1191 aa18.25■□□□□ 0.51
PHGDH-202ENST00000369409 EPN1Q9Y6I3 576 aaPredicted RBP18.25■□□□□ 0.51
PHGDH-202ENST00000369409 NRCAMQ92823 1304 aa18.25■□□□□ 0.51
PHGDH-202ENST00000369409 HAS3O00219 553 aa18.24■□□□□ 0.51
PHGDH-202ENST00000369409 P4HA2O15460 535 aa18.24■□□□□ 0.51
PHGDH-202ENST00000369409 CLDN3O15551 220 aa18.24■□□□□ 0.51
PHGDH-202ENST00000369409 B4GALT5O43286 388 aa18.24■□□□□ 0.51
PHGDH-202ENST00000369409 TNNT1P13805 278 aa18.24■□□□□ 0.51
PHGDH-202ENST00000369409 MCCD1P59942 119 aaPredicted RBP18.24■□□□□ 0.51
PHGDH-202ENST00000369409 CACNB2Q08289 660 aaPredicted RBP18.24■□□□□ 0.51
PHGDH-202ENST00000369409 PRPF4BQ13523 1007 aaKnown RBP18.24■□□□□ 0.51
PHGDH-202ENST00000369409 EPC2Q52LR7 807 aa18.24■□□□□ 0.51
PHGDH-202ENST00000369409 IQCEQ6IPM2 695 aa18.24■□□□□ 0.51
PHGDH-202ENST00000369409 CRELD2Q6UXH1 353 aaPredicted RBP18.24■□□□□ 0.51
PHGDH-202ENST00000369409 ZBTB33Q86T24 672 aa18.24■□□□□ 0.51
PHGDH-202ENST00000369409 SCLT1Q96NL6 688 aa18.24■□□□□ 0.51
PHGDH-202ENST00000369409 SPAG5Q96R06 1193 aa18.24■□□□□ 0.51
PHGDH-202ENST00000369409 FBXL5Q9UKA1 691 aa18.24■□□□□ 0.51
PHGDH-202ENST00000369409 SCN10AQ9Y5Y9 1956 aa18.24■□□□□ 0.51
PHGDH-202ENST00000369409 ACKR2O00590 384 aa18.24■□□□□ 0.51
PHGDH-202ENST00000369409 LDHAP00338 332 aaKnown RBP18.24■□□□□ 0.51
PHGDH-202ENST00000369409 MAP2K2P36507 400 aa18.24■□□□□ 0.51
PHGDH-202ENST00000369409 MAP2K1Q02750 393 aaPredicted RBP18.24■□□□□ 0.51
PHGDH-202ENST00000369409 CETN1Q12798 172 aa18.24■□□□□ 0.51
PHGDH-202ENST00000369409 TMEM132AQ24JP5 1023 aa18.24■□□□□ 0.51
PHGDH-202ENST00000369409 SEZ6Q53EL9 994 aa18.24■□□□□ 0.51
PHGDH-202ENST00000369409 KIAA0319LQ8IZA0 1049 aa18.24■□□□□ 0.51
PHGDH-202ENST00000369409 NLRP7Q8WX94 980 aa18.24■□□□□ 0.51
PHGDH-202ENST00000369409 TCHPQ9BT92 498 aa18.24■□□□□ 0.51
PHGDH-202ENST00000369409 KATNAL1Q9BW62 490 aa18.24■□□□□ 0.51
PHGDH-202ENST00000369409 RBAKQ9NYW8 714 aaPredicted RBP18.24■□□□□ 0.51
PHGDH-202ENST00000369409 CSDE1O75534 798 aaKnown RBP18.23■□□□□ 0.51
PHGDH-202ENST00000369409 IQCF3P0C7M6 154 aa18.23■□□□□ 0.51
PHGDH-202ENST00000369409 CYLC1P35663 651 aaPredicted RBP18.23■□□□□ 0.51
PHGDH-202ENST00000369409 GPC3P51654 580 aa18.23■□□□□ 0.51
PHGDH-202ENST00000369409 WNT7BP56706 349 aa18.23■□□□□ 0.51
PHGDH-202ENST00000369409 PURAQ00577 322 aaKnown RBP18.23■□□□□ 0.51
PHGDH-202ENST00000369409 POU5F1BQ06416 359 aa18.23■□□□□ 0.51
PHGDH-202ENST00000369409 PSMD6Q15008 389 aa18.23■□□□□ 0.51
PHGDH-202ENST00000369409 TDRD12Q587J7 1177 aaKnown RBP18.23■□□□□ 0.51
PHGDH-202ENST00000369409 ATF7IP2Q5U623 682 aa18.23■□□□□ 0.51
PHGDH-202ENST00000369409 IFNLR1Q8IU57 520 aaPredicted RBP18.23■□□□□ 0.51
PHGDH-202ENST00000369409 CCDC170Q8IYT3 715 aa18.23■□□□□ 0.51
PHGDH-202ENST00000369409 LMO3Q8TAP4 145 aa18.23■□□□□ 0.51
PHGDH-202ENST00000369409 SYN2Q92777 582 aaPredicted RBP18.23■□□□□ 0.51
PHGDH-202ENST00000369409 FAM49AQ9H0Q0 323 aaPredicted RBP18.23■□□□□ 0.51
PHGDH-202ENST00000369409 TMEM8AQ9HCN3 771 aa18.23■□□□□ 0.51
PHGDH-202ENST00000369409 PRMT7Q9NVM4 692 aaPredicted RBP18.23■□□□□ 0.51
PHGDH-202ENST00000369409 APEX2Q9UBZ4 518 aa18.23■□□□□ 0.51
PHGDH-202ENST00000369409 SRRDQ9UH36 339 aa18.23■□□□□ 0.51
PHGDH-202ENST00000369409 A0A0U1RQJ8 604 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 GOLGA6L9A6NEM1 432 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 ABLIM1O14639 778 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 SEPT4O43236 478 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 ZEB2O60315 1214 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 LRRN2O75325 713 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 PGK1P00558 417 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 PRKAR2AP13861 404 aaKnown RBP18.22■□□□□ 0.51
PHGDH-202ENST00000369409 GJA9P57773 515 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 ARID5AQ03989 594 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 ENPEPQ07075 957 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 HIC1Q14526 733 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 HSP90AA2PQ14568 343 aaPredicted RBP18.22■□□□□ 0.51
PHGDH-202ENST00000369409 ASIC2Q16515 512 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 HGSNATQ68CP4 663 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 KRT39Q6A163 491 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 MPZL3Q6UWV2 235 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 TSHZ1Q6ZSZ6 1077 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 EHBP1Q8NDI1 1231 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 ATRIPQ8WXE1 791 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 FAM84AQ96KN4 292 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 REXO2Q9Y3B8 237 aaKnown RBP18.22■□□□□ 0.51
PHGDH-202ENST00000369409 MBLAC1A4D2B0 266 aaPredicted RBP18.22■□□□□ 0.51
PHGDH-202ENST00000369409 PMM2O15305 246 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 FAM189A1O60320 539 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 RARBP10826 455 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 PROZP22891 400 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 CCND3P30281 292 aaPredicted RBP18.22■□□□□ 0.51
PHGDH-202ENST00000369409 EIF4A3P38919 411 aaKnown RBP18.22■□□□□ 0.51
PHGDH-202ENST00000369409 JAM2P57087 298 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 MCL1Q07820 350 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 ZNF568Q3ZCX4 644 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 EEF1DP3Q658K8 133 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 LMBRD2Q68DH5 695 aaPredicted RBP18.22■□□□□ 0.51
PHGDH-202ENST00000369409 CDR2LQ86X02 465 aaPredicted RBP18.22■□□□□ 0.51
PHGDH-202ENST00000369409 CCDC42Q96M95 316 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 FNBP1Q96RU3 617 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 UPF3AQ9H1J1 476 aaKnown RBP18.22■□□□□ 0.51
PHGDH-202ENST00000369409 DEF6Q9H4E7 631 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 PDE11AQ9HCR9 933 aa18.22■□□□□ 0.51
PHGDH-202ENST00000369409 SERPING1P05155 500 aa18.21■□□□□ 0.51
PHGDH-202ENST00000369409 CYP2C9P11712 490 aa18.21■□□□□ 0.51
PHGDH-202ENST00000369409 GTF2H1P32780 548 aa18.21■□□□□ 0.51
PHGDH-202ENST00000369409 TNFSF9P41273 254 aa18.21■□□□□ 0.51
PHGDH-202ENST00000369409 TMEM62Q0P6H9 643 aa18.21■□□□□ 0.51
PHGDH-202ENST00000369409 FAM187BQ17R55 369 aa18.21■□□□□ 0.51
PHGDH-202ENST00000369409 SLC9C1Q4G0N8 1177 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms