RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 C9orf72Q96LT7 481 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 SLCO1B3Q9NPD5 702 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 DIS3Q9Y2L1 958 aaKnown RBP13.18□□□□□ -0.3
PHGDH-201ENST00000369407 GPR75-ASB3A0A0A6YYF3 556 aa13.17□□□□□ -0.3
PHGDH-201ENST00000369407 DPPA5A6NC42 116 aa13.17□□□□□ -0.3
PHGDH-201ENST00000369407 hCG_1984214I3L0E3 225 aa13.17□□□□□ -0.3
PHGDH-201ENST00000369407 GJB6O95452 261 aa13.17□□□□□ -0.3
PHGDH-201ENST00000369407 GM2AP17900 193 aa13.17□□□□□ -0.3
PHGDH-201ENST00000369407 RAD23BP54727 409 aa13.17□□□□□ -0.3
PHGDH-201ENST00000369407 SESN3P58005 492 aa13.17□□□□□ -0.3
PHGDH-201ENST00000369407 DNAJC3Q13217 504 aa13.17□□□□□ -0.3
PHGDH-201ENST00000369407 PPP2R5EQ16537 467 aa13.17□□□□□ -0.3
PHGDH-201ENST00000369407 BTNL9Q6UXG8 535 aa13.17□□□□□ -0.3
PHGDH-201ENST00000369407 ZNF713Q8N859 430 aaPredicted RBP13.17□□□□□ -0.3
PHGDH-201ENST00000369407 TAOK3Q9H2K8 898 aa13.17□□□□□ -0.3
PHGDH-201ENST00000369407 CHST7Q9NS84 486 aa13.17□□□□□ -0.3
PHGDH-201ENST00000369407 RABGAP1Q9Y3P9 1069 aa13.17□□□□□ -0.3
PHGDH-201ENST00000369407 ROBO1Q9Y6N7 1651 aa13.17□□□□□ -0.3
PHGDH-201ENST00000369407 DDX60LQ5H9U9 1706 aaKnown RBP13.17□□□□□ -0.3
PHGDH-201ENST00000369407 PASKQ96RG2 1323 aa13.17□□□□□ -0.3
PHGDH-201ENST00000369407 SPDYE5A6NIY4 337 aa13.17□□□□□ -0.3
PHGDH-201ENST00000369407 THAP12O43422 761 aa13.17□□□□□ -0.3
PHGDH-201ENST00000369407 TOM1O60784 492 aa13.17□□□□□ -0.3
PHGDH-201ENST00000369407 SGPL1O95470 568 aa13.17□□□□□ -0.3
PHGDH-201ENST00000369407 ECEL1O95672 775 aa13.17□□□□□ -0.3
PHGDH-201ENST00000369407 TTLL1O95922 423 aa13.17□□□□□ -0.3
PHGDH-201ENST00000369407 PCK1P35558 622 aa13.17□□□□□ -0.3
PHGDH-201ENST00000369407 BLMHQ13867 455 aa13.17□□□□□ -0.3
PHGDH-201ENST00000369407 TTC8Q8TAM2 541 aa13.17□□□□□ -0.3
PHGDH-201ENST00000369407 ETNPPLQ8TBG4 499 aa13.17□□□□□ -0.3
PHGDH-201ENST00000369407 CNKSR1Q969H4 720 aa13.17□□□□□ -0.3
PHGDH-201ENST00000369407 PITPNM3Q9BZ71 974 aa13.17□□□□□ -0.3
PHGDH-201ENST00000369407 PARP2Q9UGN5 583 aa13.17□□□□□ -0.3
PHGDH-201ENST00000369407 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.17□□□□□ -0.3
PHGDH-201ENST00000369407 SLC16A3O15427 465 aaKnown RBP13.16□□□□□ -0.3
PHGDH-201ENST00000369407 HIP1RO75146 1068 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 SNUPNO95149 360 aaKnown RBP13.16□□□□□ -0.3
PHGDH-201ENST00000369407 ANXA13P27216 316 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 RPA1P27694 616 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 SLC10A5Q5PT55 438 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 RINT1Q6NUQ1 792 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 MIGA2Q7L4E1 593 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 ZNF804AQ7Z570 1209 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 AMIGO3Q86WK7 504 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 ZSWIM2Q8NEG5 633 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 DDX4Q9NQI0 724 aaKnown RBP13.16□□□□□ -0.3
PHGDH-201ENST00000369407 PRKAG3Q9UGI9 489 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 EXOC3O60645 756 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 UFL1O94874 794 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 CBX6O95503 412 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 SNHG28P0DPA3 235 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 GCLMP48507 274 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 CTCFP49711 727 aaPredicted RBP13.16□□□□□ -0.3
PHGDH-201ENST00000369407 ITGA8P53708 1063 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 RWDD2BP57060 319 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 UBXN2AP68543 259 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 SIX1Q15475 284 aaPredicted RBP13.16□□□□□ -0.3
PHGDH-201ENST00000369407 C2CD6Q53TS8 623 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 MFSD5Q6N075 450 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 CYP4F22Q6NT55 531 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 SUPT20HQ8NEM7 779 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 ERMNQ8TAM6 284 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 PIDD1Q9HB75 910 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 ALAS1P13196 640 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 HOXA7P31268 230 aaPredicted RBP13.16□□□□□ -0.3
PHGDH-201ENST00000369407 GPC5P78333 572 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 TMED2Q15363 201 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 SGO2Q562F6 1265 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 INTS8Q75QN2 995 aaKnown RBP13.16□□□□□ -0.3
PHGDH-201ENST00000369407 EIF2AK1Q9BQI3 630 aaKnown RBP13.16□□□□□ -0.3
PHGDH-201ENST00000369407 HERPUD2Q9BSE4 406 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 TMEM109Q9BVC6 243 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 HEMGNQ9BXL5 484 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 TRIM7Q9C029 511 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 CD209Q9NNX6 404 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 ZFATQ9P243 1243 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 MTUS1Q9ULD2 1270 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 NAALADL1Q9UQQ1 740 aa13.16□□□□□ -0.3
PHGDH-201ENST00000369407 MEIS2O14770 477 aa13.15□□□□□ -0.3
PHGDH-201ENST00000369407 ENTPD5O75356 428 aa13.15□□□□□ -0.3
PHGDH-201ENST00000369407 UNC5CO95185 931 aa13.15□□□□□ -0.3
PHGDH-201ENST00000369407 TAC1P20366 129 aa13.15□□□□□ -0.3
PHGDH-201ENST00000369407 EPHB2P29323 1055 aa13.15□□□□□ -0.3
PHGDH-201ENST00000369407 RHOT2Q8IXI1 618 aa13.15□□□□□ -0.3
PHGDH-201ENST00000369407 GBP7Q8N8V2 638 aaPredicted RBP13.15□□□□□ -0.3
PHGDH-201ENST00000369407 NUP85Q9BW27 656 aa13.15□□□□□ -0.3
PHGDH-201ENST00000369407 CORO1CQ9ULV4 474 aaPredicted RBP13.15□□□□□ -0.3
PHGDH-201ENST00000369407 FRMD4BQ9Y2L6 1034 aa13.15□□□□□ -0.3
PHGDH-201ENST00000369407 MSH4O15457 936 aa13.15□□□□□ -0.3
PHGDH-201ENST00000369407 ATP4AP20648 1035 aa13.15□□□□□ -0.3
PHGDH-201ENST00000369407 GPSM2P81274 684 aa13.15□□□□□ -0.3
PHGDH-201ENST00000369407 IKQ13123 557 aaPredicted RBP13.15□□□□□ -0.3
PHGDH-201ENST00000369407 ANO7Q6IWH7 933 aa13.15□□□□□ -0.3
PHGDH-201ENST00000369407 TPTE2Q6XPS3 522 aa13.15□□□□□ -0.3
PHGDH-201ENST00000369407 SLFN12Q8IYM2 578 aa13.15□□□□□ -0.3
PHGDH-201ENST00000369407 SYCP3Q8IZU3 236 aa13.15□□□□□ -0.3
PHGDH-201ENST00000369407 RUNDC3BQ96NL0 473 aa13.15□□□□□ -0.3
PHGDH-201ENST00000369407 KIAA1683Q9H0B3 1180 aa13.15□□□□□ -0.3
PHGDH-201ENST00000369407 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.15□□□□□ -0.3
PHGDH-201ENST00000369407 NKIRAS1Q9NYS0 192 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms