RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 NMT1P30419 496 aaKnown RBP19.24■□□□□ 0.67
SNX27-202ENST00000368841 ARSEP51690 589 aa19.24■□□□□ 0.67
SNX27-202ENST00000368841 ALCAMQ13740 583 aa19.24■□□□□ 0.67
SNX27-202ENST00000368841 RINLQ6ZS11 566 aa19.24■□□□□ 0.67
SNX27-202ENST00000368841 LY9Q9HBG7 655 aa19.24■□□□□ 0.67
SNX27-202ENST00000368841 TEX33O43247 280 aa19.24■□□□□ 0.67
SNX27-202ENST00000368841 CALB1P05937 261 aa19.24■□□□□ 0.67
SNX27-202ENST00000368841 EN1Q05925 392 aaPredicted RBP19.24■□□□□ 0.67
SNX27-202ENST00000368841 SPATA2LQ8IUW3 424 aaPredicted RBP19.24■□□□□ 0.67
SNX27-202ENST00000368841 RGL1Q9NZL6 768 aa19.24■□□□□ 0.67
SNX27-202ENST00000368841 APOL1O14791 398 aa19.24■□□□□ 0.67
SNX27-202ENST00000368841 ENO1P06733 434 aaKnown RBP19.24■□□□□ 0.67
SNX27-202ENST00000368841 ACOT2P49753 483 aa19.24■□□□□ 0.67
SNX27-202ENST00000368841 HMGCS2P54868 508 aa19.24■□□□□ 0.67
SNX27-202ENST00000368841 DMTNQ08495 405 aa19.24■□□□□ 0.67
SNX27-202ENST00000368841 SYTL3Q4VX76 610 aa19.24■□□□□ 0.67
SNX27-202ENST00000368841 CLEC10AQ8IUN9 316 aa19.24■□□□□ 0.67
SNX27-202ENST00000368841 STX18Q9P2W9 335 aaKnown RBP19.24■□□□□ 0.67
SNX27-202ENST00000368841 AARS2Q5JTZ9 985 aaKnown RBP19.24■□□□□ 0.67
SNX27-202ENST00000368841 OSBPL9Q96SU4 736 aa19.24■□□□□ 0.67
SNX27-202ENST00000368841 SEPT5Q99719 369 aaPredicted RBP19.24■□□□□ 0.67
SNX27-202ENST00000368841 DDHD2O94830 711 aa19.23■□□□□ 0.67
SNX27-202ENST00000368841 LMNAP02545 664 aaKnown RBP19.23■□□□□ 0.67
SNX27-202ENST00000368841 ETFBP38117 255 aa19.23■□□□□ 0.67
SNX27-202ENST00000368841 PPP1R2P3Q6NXS1 205 aa19.23■□□□□ 0.67
SNX27-202ENST00000368841 PID1Q7Z2X4 250 aa19.23■□□□□ 0.67
SNX27-202ENST00000368841 SH3GLB2Q9NR46 395 aa19.23■□□□□ 0.67
SNX27-202ENST00000368841 IP6K2Q9UHH9 426 aa19.23■□□□□ 0.67
SNX27-202ENST00000368841 KRT17Q04695 432 aa19.23■□□□□ 0.67
SNX27-202ENST00000368841 ATP11CQ8NB49 1132 aa19.23■□□□□ 0.67
SNX27-202ENST00000368841 RNF149Q8NC42 400 aa19.23■□□□□ 0.67
SNX27-202ENST00000368841 NSUN6Q8TEA1 469 aaKnown RBP19.23■□□□□ 0.67
SNX27-202ENST00000368841 ELMO2Q96JJ3 720 aa19.23■□□□□ 0.67
SNX27-202ENST00000368841 CDV3Q9UKY7 258 aaKnown RBP19.23■□□□□ 0.67
SNX27-202ENST00000368841 SNX5Q9Y5X3 404 aa19.23■□□□□ 0.67
SNX27-202ENST00000368841 SUPT3HO75486 399 aa19.23■□□□□ 0.67
SNX27-202ENST00000368841 EIF2AQ9BY44 585 aaKnown RBP19.23■□□□□ 0.67
SNX27-202ENST00000368841 IPO5O00410 1097 aaKnown RBP19.23■□□□□ 0.67
SNX27-202ENST00000368841 RAET1EQ8TD07 263 aa19.23■□□□□ 0.67
SNX27-202ENST00000368841 CD209Q9NNX6 404 aa19.23■□□□□ 0.67
SNX27-202ENST00000368841 HSPBP1Q9NZL4 362 aa19.23■□□□□ 0.67
SNX27-202ENST00000368841 TJP2Q9UDY2 1190 aa19.23■□□□□ 0.67
SNX27-202ENST00000368841 FARP1Q9Y4F1 1045 aaPredicted RBP19.23■□□□□ 0.67
SNX27-202ENST00000368841 NAALADL2Q58DX5 795 aa19.23■□□□□ 0.67
SNX27-202ENST00000368841 RCSD1Q6JBY9 416 aa19.23■□□□□ 0.67
SNX27-202ENST00000368841 CCDC137Q6PK04 289 aaKnown RBP19.23■□□□□ 0.67
SNX27-202ENST00000368841 BRIP1Q9BX63 1249 aa19.23■□□□□ 0.67
SNX27-202ENST00000368841 GCOM2Q9BZD3 368 aaPredicted RBP19.23■□□□□ 0.67
SNX27-202ENST00000368841 PRR23AA6NEV1 266 aa19.23■□□□□ 0.67
SNX27-202ENST00000368841 PODXLO00592 558 aa19.23■□□□□ 0.67
SNX27-202ENST00000368841 GUCY1A2P33402 732 aa19.22■□□□□ 0.67
SNX27-202ENST00000368841 MFSD14CQ5VZR4 134 aa19.22■□□□□ 0.67
SNX27-202ENST00000368841 ADNPQ9H2P0 1102 aa19.22■□□□□ 0.67
SNX27-202ENST00000368841 EIF3BP55884 814 aaKnown RBP19.22■□□□□ 0.67
SNX27-202ENST00000368841 RUBCNLQ9H714 662 aa19.22■□□□□ 0.67
SNX27-202ENST00000368841 CYP26B1Q9NR63 512 aa19.22■□□□□ 0.67
SNX27-202ENST00000368841 MYO1GB0I1T2 1018 aa19.22■□□□□ 0.67
SNX27-202ENST00000368841 KIF28PB7ZC32 967 aa19.22■□□□□ 0.67
SNX27-202ENST00000368841 RAP1GDS1P52306 607 aa19.22■□□□□ 0.67
SNX27-202ENST00000368841 AP3B2Q13367 1082 aa19.22■□□□□ 0.67
SNX27-202ENST00000368841 GPD1LQ8N335 351 aa19.22■□□□□ 0.67
SNX27-202ENST00000368841 TMA16Q96EY4 203 aaKnown RBP19.22■□□□□ 0.67
SNX27-202ENST00000368841 CHCHD3Q9NX63 227 aaKnown RBP19.22■□□□□ 0.67
SNX27-202ENST00000368841 ERBB4Q15303 1308 aa19.22■□□□□ 0.67
SNX27-202ENST00000368841 C2CD2LO14523 706 aa19.22■□□□□ 0.67
SNX27-202ENST00000368841 KRT38O76015 456 aa19.22■□□□□ 0.67
SNX27-202ENST00000368841 ATP1A1P05023 1023 aaKnown RBP19.22■□□□□ 0.67
SNX27-202ENST00000368841 CYTH1Q15438 398 aa19.22■□□□□ 0.67
SNX27-202ENST00000368841 GIMAP8Q8ND71 665 aaPredicted RBP19.22■□□□□ 0.67
SNX27-202ENST00000368841 PLEKHA5Q9HAU0 1116 aa19.22■□□□□ 0.67
SNX27-202ENST00000368841 TRIM33Q9UPN9 1127 aa19.22■□□□□ 0.67
SNX27-202ENST00000368841 NECTIN1Q15223 517 aa19.22■□□□□ 0.67
SNX27-202ENST00000368841 QRICH1Q2TAL8 776 aa19.22■□□□□ 0.67
SNX27-202ENST00000368841 IZUMO3Q5VZ72 239 aa19.22■□□□□ 0.67
SNX27-202ENST00000368841 MUC3BQ9H195 1237 aa19.22■□□□□ 0.67
SNX27-202ENST00000368841 A0A087WUV0 522 aaPredicted RBP19.21■□□□□ 0.67
SNX27-202ENST00000368841 SGO1Q5FBB7 561 aa19.21■□□□□ 0.67
SNX27-202ENST00000368841 SRPK1Q96SB4 655 aaKnown RBP19.21■□□□□ 0.67
SNX27-202ENST00000368841 MAD2L2Q9UI95 211 aa19.21■□□□□ 0.67
SNX27-202ENST00000368841 TLR2O60603 784 aa19.21■□□□□ 0.67
SNX27-202ENST00000368841 NFKBIAP25963 317 aa19.21■□□□□ 0.67
SNX27-202ENST00000368841 YWHABP31946 246 aaKnown RBP19.21■□□□□ 0.67
SNX27-202ENST00000368841 QARSP47897 775 aaKnown RBP19.21■□□□□ 0.67
SNX27-202ENST00000368841 CC2D1AQ6P1N0 951 aaPredicted RBP19.21■□□□□ 0.67
SNX27-202ENST00000368841 MARCOQ9UEW3 520 aaPredicted RBP19.21■□□□□ 0.67
SNX27-202ENST00000368841 AGO2Q9UKV8 859 aaKnown RBP19.21■□□□□ 0.67
SNX27-202ENST00000368841 NLRP1Q9C000 1473 aa19.21■□□□□ 0.67
SNX27-202ENST00000368841 ERVV-1B6SEH8 477 aa19.21■□□□□ 0.67
SNX27-202ENST00000368841 HAUS5O94927 633 aa19.21■□□□□ 0.67
SNX27-202ENST00000368841 KDSRQ06136 332 aa19.21■□□□□ 0.67
SNX27-202ENST00000368841 DMC1Q14565 340 aa19.21■□□□□ 0.67
SNX27-202ENST00000368841 ERLEC1Q96DZ1 483 aa19.21■□□□□ 0.67
SNX27-202ENST00000368841 UTYO14607 1347 aa19.21■□□□□ 0.67
SNX27-202ENST00000368841 LGALS16A8MUM7 142 aa19.21■□□□□ 0.67
SNX27-202ENST00000368841 TCN1P20061 433 aaPredicted RBP19.21■□□□□ 0.67
SNX27-202ENST00000368841 EIF3EP60228 445 aaKnown RBP19.21■□□□□ 0.67
SNX27-202ENST00000368841 NAA30Q147X3 362 aaPredicted RBP19.21■□□□□ 0.67
SNX27-202ENST00000368841 SF3B3Q15393 1217 aaKnown RBP19.21■□□□□ 0.67
SNX27-202ENST00000368841 LZTS1Q9Y250 596 aa19.21■□□□□ 0.67
SNX27-202ENST00000368841 PNMA6AP0CW24 399 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms