RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 AMPD3Q01432 767 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 ZNF568Q3ZCX4 644 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 CNNM4Q6P4Q7 775 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 GLB1LQ6UWU2 654 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 ZNF720Q7Z2F6 126 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 ZBTB33Q86T24 672 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 LRRC43Q8N309 656 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 GLIS3Q8NEA6 775 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 FBXO22Q8NEZ5 403 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 ZFP42Q96MM3 310 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 ADPGKQ9BRR6 497 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 LRRC27Q9C0I9 530 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 CXCL16Q9H2A7 254 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 SNTG2Q9NY99 539 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 SEL1LQ9UBV2 794 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 REV3LO60673 3130 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 B4GALT3O60512 393 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 PPP1R37O75864 691 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 MYBP10242 640 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 BMPR1AP36894 532 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 PBX3P40426 434 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 NOMO2Q5JPE7 1267 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 CCDC65Q8IXS2 484 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 SAMD11Q96NU1 681 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 GAD1Q99259 594 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 STRA6Q9BX79 667 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 HAPLN2Q9GZV7 340 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 ST6GALNAC4Q9H4F1 302 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 MRPL44Q9H9J2 332 aaKnown RBP16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 OLFML3Q9NRN5 406 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 TBC1D13Q9NVG8 400 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 MIOSQ9NXC5 875 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 KLK14Q9P0G3 267 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 ANKFY1Q9P2R3 1169 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 TRIP11Q15643 1979 aa16.53■□□□□ 0.24
SMPDL3A-201ENST00000368440 GADD45BO75293 160 aaPredicted RBP16.53■□□□□ 0.24
SMPDL3A-201ENST00000368440 PRR29P0C7W0 189 aa16.53■□□□□ 0.24
SMPDL3A-201ENST00000368440 HARSP12081 509 aaKnown RBP16.53■□□□□ 0.24
SMPDL3A-201ENST00000368440 KCNA1Q09470 495 aa16.53■□□□□ 0.24
SMPDL3A-201ENST00000368440 DCAF4L1Q3SXM0 396 aa16.53■□□□□ 0.24
SMPDL3A-201ENST00000368440 SPOUT1Q5T280 376 aaKnown RBP16.53■□□□□ 0.24
SMPDL3A-201ENST00000368440 SLC39A4Q6P5W5 647 aa16.53■□□□□ 0.24
SMPDL3A-201ENST00000368440 MPZL3Q6UWV2 235 aa16.53■□□□□ 0.24
SMPDL3A-201ENST00000368440 MAP4K3Q8IVH8 894 aa16.53■□□□□ 0.24
SMPDL3A-201ENST00000368440 BICD1Q96G01 975 aa16.53■□□□□ 0.24
SMPDL3A-201ENST00000368440 PARP2Q9UGN5 583 aa16.53■□□□□ 0.24
SMPDL3A-201ENST00000368440 MYO9BQ13459 2157 aa16.53■□□□□ 0.24
SMPDL3A-201ENST00000368440 ARL5CA6NH57 179 aa16.52■□□□□ 0.24
SMPDL3A-201ENST00000368440 TISP43B9A030 160 aa16.52■□□□□ 0.24
SMPDL3A-201ENST00000368440 C5orf67F2Z3F1 127 aa16.52■□□□□ 0.24
SMPDL3A-201ENST00000368440 RECQL4O94761 1208 aa16.52■□□□□ 0.24
SMPDL3A-201ENST00000368440 ZNF202O95125 648 aa16.52■□□□□ 0.24
SMPDL3A-201ENST00000368440 GCNT3O95395 438 aa16.52■□□□□ 0.24
SMPDL3A-201ENST00000368440 POMCP01189 267 aa16.52■□□□□ 0.24
SMPDL3A-201ENST00000368440 SCNN1GP51170 649 aa16.52■□□□□ 0.24
SMPDL3A-201ENST00000368440 ZPBP2Q6X784 338 aa16.52■□□□□ 0.24
SMPDL3A-201ENST00000368440 KRBA2Q6ZNG9 492 aa16.52■□□□□ 0.24
SMPDL3A-201ENST00000368440 UNC13DQ70J99 1090 aa16.52■□□□□ 0.24
SMPDL3A-201ENST00000368440 COLGALT1Q8NBJ5 622 aa16.52■□□□□ 0.24
SMPDL3A-201ENST00000368440 MRPL9Q9BYD2 267 aaKnown RBP16.52■□□□□ 0.24
SMPDL3A-201ENST00000368440 USP25Q9UHP3 1055 aa16.52■□□□□ 0.24
SMPDL3A-201ENST00000368440 GDAQ9Y2T3 454 aa16.52■□□□□ 0.24
SMPDL3A-201ENST00000368440 GOLGA6L4A6NEF3 574 aa16.52■□□□□ 0.23
SMPDL3A-201ENST00000368440 KLRC4O43908 158 aa16.52■□□□□ 0.23
SMPDL3A-201ENST00000368440 TOM1L1O75674 476 aa16.52■□□□□ 0.23
SMPDL3A-201ENST00000368440 PIGRP01833 764 aa16.52■□□□□ 0.23
SMPDL3A-201ENST00000368440 OSTNP61366 133 aa16.52■□□□□ 0.23
SMPDL3A-201ENST00000368440 EHHADHQ08426 723 aa16.52■□□□□ 0.23
SMPDL3A-201ENST00000368440 SEZ6Q53EL9 994 aa16.52■□□□□ 0.23
SMPDL3A-201ENST00000368440 ZNF280BQ86YH2 543 aa16.52■□□□□ 0.23
SMPDL3A-201ENST00000368440 FMR1NBQ8N0W7 255 aaPredicted RBP16.52■□□□□ 0.23
SMPDL3A-201ENST00000368440 GSTCDQ8NEC7 633 aa16.52■□□□□ 0.23
SMPDL3A-201ENST00000368440 TCHPQ9BT92 498 aa16.52■□□□□ 0.23
SMPDL3A-201ENST00000368440 GBP3Q9H0R5 595 aa16.52■□□□□ 0.23
SMPDL3A-201ENST00000368440 NRDE2Q9H7Z3 1164 aa16.52■□□□□ 0.23
SMPDL3A-201ENST00000368440 UBN1Q9NPG3 1134 aa16.52■□□□□ 0.23
SMPDL3A-201ENST00000368440 DNAJB4Q9UDY4 337 aa16.52■□□□□ 0.23
SMPDL3A-201ENST00000368440 GIT1Q9Y2X7 761 aa16.52■□□□□ 0.23
SMPDL3A-201ENST00000368440 RWDD3Q9Y3V2 267 aa16.52■□□□□ 0.23
SMPDL3A-201ENST00000368440 ANKRD63C9JTQ0 380 aa16.51■□□□□ 0.23
SMPDL3A-201ENST00000368440 H3BNC9 293 aa16.51■□□□□ 0.23
SMPDL3A-201ENST00000368440 HNRNPDLO14979 420 aaKnown RBP16.51■□□□□ 0.23
SMPDL3A-201ENST00000368440 INPPL1O15357 1258 aa16.51■□□□□ 0.23
SMPDL3A-201ENST00000368440 DDHD2O94830 711 aa16.51■□□□□ 0.23
SMPDL3A-201ENST00000368440 FOSL2P15408 326 aa16.51■□□□□ 0.23
SMPDL3A-201ENST00000368440 LIG4P49917 911 aa16.51■□□□□ 0.23
SMPDL3A-201ENST00000368440 GPM6BQ13491 265 aa16.51■□□□□ 0.23
SMPDL3A-201ENST00000368440 SNW1Q13573 536 aaKnown RBP16.51■□□□□ 0.23
SMPDL3A-201ENST00000368440 THNSL1Q8IYQ7 743 aa16.51■□□□□ 0.23
SMPDL3A-201ENST00000368440 HACE1Q8IYU2 909 aa16.51■□□□□ 0.23
SMPDL3A-201ENST00000368440 SLC17A8Q8NDX2 589 aa16.51■□□□□ 0.23
SMPDL3A-201ENST00000368440 ENGASEQ8NFI3 743 aa16.51■□□□□ 0.23
SMPDL3A-201ENST00000368440 URGCPQ8TCY9 931 aa16.51■□□□□ 0.23
SMPDL3A-201ENST00000368440 GAS2L1Q99501 681 aaPredicted RBP16.51■□□□□ 0.23
SMPDL3A-201ENST00000368440 ALG13Q9NP73 1137 aaKnown RBP16.51■□□□□ 0.23
SMPDL3A-201ENST00000368440 PLAGL2Q9UPG8 496 aa16.51■□□□□ 0.23
SMPDL3A-201ENST00000368440 CITO14578 2027 aa16.51■□□□□ 0.23
SMPDL3A-201ENST00000368440 PDCD11Q14690 1871 aaKnown RBP16.51■□□□□ 0.23
SMPDL3A-201ENST00000368440 GRM6O15303 877 aa16.5■□□□□ 0.23
SMPDL3A-201ENST00000368440 ZC3H11AO75152 810 aaKnown RBP eCLIP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms