RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 ADAT2Q7Z6V5 191 aaKnown RBP15.36■□□□□ 0.05
CD48-201ENST00000368045 MAP4K3Q8IVH8 894 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 RAPGEF5Q92565 580 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 KIFAP3Q92845 792 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 KREMEN1Q96MU8 473 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 PLVAPQ9BX97 442 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 ACTR5Q9H9F9 607 aaPredicted RBP15.36■□□□□ 0.05
CD48-201ENST00000368045 GINM1Q9NU53 330 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 CNOT8Q9UFF9 292 aaKnown RBP15.36■□□□□ 0.05
CD48-201ENST00000368045 TCEAL9Q9UHQ7 104 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 TRPC6Q9Y210 931 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 SNX24Q9Y343 169 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 SLC16A4O15374 487 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 MRPS9P82933 396 aaKnown RBP15.36■□□□□ 0.05
CD48-201ENST00000368045 FMO1Q01740 532 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 CDR2Q01850 454 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 ADCY2Q08462 1091 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 SNRNP35Q16560 246 aaKnown RBP15.36■□□□□ 0.05
CD48-201ENST00000368045 C6orf118Q5T5N4 469 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 ICE2Q659A1 982 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 XRRA1Q6P2D8 792 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 ENOSF1Q7L5Y1 443 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 SLC13A5Q86YT5 568 aaPredicted RBP15.36■□□□□ 0.05
CD48-201ENST00000368045 RTKN2Q8IZC4 609 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 ZNF564Q8TBZ8 553 aaPredicted RBP15.36■□□□□ 0.05
CD48-201ENST00000368045 FBXO25Q8TCJ0 367 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 SYTL5Q8TDW5 730 aaPredicted RBP15.36■□□□□ 0.05
CD48-201ENST00000368045 SPIRE2Q8WWL2 714 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 C18orf8Q96DM3 657 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 NT5C1BQ96P26 610 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 C17orf75Q9HAS0 396 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 PKD2L1Q9P0L9 805 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 TBX20Q9UMR3 447 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 SMCHD1A6NHR9 2005 aa15.35■□□□□ 0.05
CD48-201ENST00000368045 PASKQ96RG2 1323 aa15.35■□□□□ 0.05
CD48-201ENST00000368045 TMEM110-MUSTN1A8MSY1 372 aa15.35■□□□□ 0.05
CD48-201ENST00000368045 BACH1O14867 736 aa15.35■□□□□ 0.05
CD48-201ENST00000368045 SPOPO43791 374 aa15.35■□□□□ 0.05
CD48-201ENST00000368045 AGTP01019 485 aa15.35■□□□□ 0.05
CD48-201ENST00000368045 ADRB2P07550 413 aa15.35■□□□□ 0.05
CD48-201ENST00000368045 TMOD1P28289 359 aa15.35■□□□□ 0.05
CD48-201ENST00000368045 COPB2P35606 906 aa15.35■□□□□ 0.05
CD48-201ENST00000368045 COILP38432 576 aaPredicted RBP15.35■□□□□ 0.05
CD48-201ENST00000368045 PDE6CP51160 858 aa15.35■□□□□ 0.05
CD48-201ENST00000368045 PEX3P56589 373 aa15.35■□□□□ 0.05
CD48-201ENST00000368045 RWDD2BP57060 319 aa15.35■□□□□ 0.05
CD48-201ENST00000368045 CCDC137Q6PK04 289 aaKnown RBP15.35■□□□□ 0.05
CD48-201ENST00000368045 SAMD1Q6SPF0 538 aaPredicted RBP15.35■□□□□ 0.05
CD48-201ENST00000368045 CCDC121Q6ZUS5 278 aa15.35■□□□□ 0.05
CD48-201ENST00000368045 PPM1KQ8N3J5 372 aa15.35■□□□□ 0.05
CD48-201ENST00000368045 HELQQ8TDG4 1101 aa15.35■□□□□ 0.05
CD48-201ENST00000368045 PARD3BQ8TEW8 1205 aa15.35■□□□□ 0.05
CD48-201ENST00000368045 MAIP1Q8WWC4 291 aa15.35■□□□□ 0.05
CD48-201ENST00000368045 KAT2BQ92831 832 aa15.35■□□□□ 0.05
CD48-201ENST00000368045 SLCO2A1Q92959 643 aa15.35■□□□□ 0.05
CD48-201ENST00000368045 TATDN2Q93075 761 aa15.35■□□□□ 0.05
CD48-201ENST00000368045 NUP85Q9BW27 656 aa15.35■□□□□ 0.05
CD48-201ENST00000368045 TMEM39BQ9GZU3 492 aa15.35■□□□□ 0.05
CD48-201ENST00000368045 VPS33BQ9H267 617 aa15.35■□□□□ 0.05
CD48-201ENST00000368045 VEZTQ9HBM0 779 aa15.35■□□□□ 0.05
CD48-201ENST00000368045 DDX20Q9UHI6 824 aaKnown RBP15.35■□□□□ 0.05
CD48-201ENST00000368045 PGAP2Q9UHJ9 254 aa15.35■□□□□ 0.05
CD48-201ENST00000368045 CAPN7Q9Y6W3 813 aa15.35■□□□□ 0.05
CD48-201ENST00000368045 CYP26A1O43174 497 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 CAND2O75155 1236 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 CYP11B1P15538 503 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 RPL21P46778 160 aaKnown RBP15.34■□□□□ 0.05
CD48-201ENST00000368045 MARCKSL1P49006 195 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 ACTN3Q08043 901 aaPredicted RBP15.34■□□□□ 0.05
CD48-201ENST00000368045 ERMARDQ5T6L9 678 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 RNF187Q5TA31 235 aaPredicted RBP15.34■□□□□ 0.05
CD48-201ENST00000368045 ZNF746Q6NUN9 644 aaPredicted RBP15.34■□□□□ 0.05
CD48-201ENST00000368045 TTC27Q6P3X3 843 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 TAX1BP1Q86VP1 789 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 CACNA2D3Q8IZS8 1091 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 TMEM161BQ8NDZ6 487 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 KAT5Q92993 513 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 ART4Q93070 314 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 RNF25Q96BH1 459 aaPredicted RBP15.34■□□□□ 0.05
CD48-201ENST00000368045 ZNF653Q96CK0 615 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 MFSD14AQ96MC6 490 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 FBXL18Q96ME1 805 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 XPO6Q96QU8 1125 aaKnown RBP15.34■□□□□ 0.05
CD48-201ENST00000368045 ZNF341Q9BYN7 854 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 GLIS2Q9BZE0 524 aaPredicted RBP15.34■□□□□ 0.05
CD48-201ENST00000368045 SLC38A10Q9HBR0 1119 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 MYH11P35749 1972 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 ZC3H11AO75152 810 aaKnown RBP eCLIP15.34■□□□□ 0.05
CD48-201ENST00000368045 PYGMP11217 842 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 RARGP13631 454 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 ABCD1P33897 745 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 MMP13P45452 471 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 MAP2K1Q02750 393 aaPredicted RBP15.34■□□□□ 0.05
CD48-201ENST00000368045 IFT88Q13099 833 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 SPP2Q13103 211 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 DMP1Q13316 513 aaPredicted RBP15.34■□□□□ 0.05
CD48-201ENST00000368045 GKAP1Q5VSY0 366 aaPredicted RBP15.34■□□□□ 0.05
CD48-201ENST00000368045 ACAD10Q6JQN1 1059 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 SYDE1Q6ZW31 735 aaPredicted RBP15.34■□□□□ 0.05
CD48-201ENST00000368045 CBWD2Q8IUF1 395 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms