RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 MAP4K1Q92918 833 aa13.12□□□□□ -0.31
TPR-201ENST00000367478 PDP2Q9P2J9 529 aa13.12□□□□□ -0.31
TPR-201ENST00000367478 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.12□□□□□ -0.31
TPR-201ENST00000367478 CDY2AQ9Y6F7 541 aa13.12□□□□□ -0.31
TPR-201ENST00000367478 CDY1Q9Y6F8 540 aa13.12□□□□□ -0.31
TPR-201ENST00000367478 BFSP2Q13515 415 aa13.12□□□□□ -0.31
TPR-201ENST00000367478 NUP85Q9BW27 656 aa13.12□□□□□ -0.31
TPR-201ENST00000367478 ZFYVE1Q9HBF4 777 aa13.12□□□□□ -0.31
TPR-201ENST00000367478 ITGB1BP2Q9UKP3 347 aa13.12□□□□□ -0.31
TPR-201ENST00000367478 PNMA6FA0A0J9YX94 578 aa13.12□□□□□ -0.31
TPR-201ENST00000367478 PHKA2P46019 1235 aa13.12□□□□□ -0.31
TPR-201ENST00000367478 SERPINB9P50453 376 aa13.12□□□□□ -0.31
TPR-201ENST00000367478 ATXN3P54252 364 aaPredicted RBP13.12□□□□□ -0.31
TPR-201ENST00000367478 CC2D1AQ6P1N0 951 aaPredicted RBP13.12□□□□□ -0.31
TPR-201ENST00000367478 C16orf62Q7Z3J2 963 aa13.12□□□□□ -0.31
TPR-201ENST00000367478 SPATA21Q7Z572 469 aa13.12□□□□□ -0.31
TPR-201ENST00000367478 RIBC1Q8N443 379 aaPredicted RBP13.12□□□□□ -0.31
TPR-201ENST00000367478 CLCA2Q9UQC9 943 aa13.12□□□□□ -0.31
TPR-201ENST00000367478 MAST1Q9Y2H9 1570 aa13.12□□□□□ -0.31
TPR-201ENST00000367478 AGTP01019 485 aa13.12□□□□□ -0.31
TPR-201ENST00000367478 RANBP17Q9H2T7 1088 aaKnown RBP13.12□□□□□ -0.31
TPR-201ENST00000367478 CCDC195A0A1B0GUA6 201 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 MEFVO15553 781 aaPredicted RBP13.11□□□□□ -0.31
TPR-201ENST00000367478 PURAQ00577 322 aaKnown RBP13.11□□□□□ -0.31
TPR-201ENST00000367478 AP3B2Q13367 1082 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 XXYLT1Q8NBI6 393 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 CABLES1Q8TDN4 633 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 KRT35Q92764 455 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 MTERF3Q96E29 417 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 IMPAD1Q9NX62 359 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 MTO1Q9Y2Z2 717 aaKnown RBP13.11□□□□□ -0.31
TPR-201ENST00000367478 SMAPO00193 183 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 ANXA11P50995 505 aaKnown RBP13.11□□□□□ -0.31
TPR-201ENST00000367478 KRT24Q2M2I5 525 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 CCDC137Q6PK04 289 aaKnown RBP13.11□□□□□ -0.31
TPR-201ENST00000367478 NLRP9Q7RTR0 991 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 SERPINB13Q9UIV8 391 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 SNX24Q9Y343 169 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 ABCC4O15439 1325 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 MYOM2P54296 1465 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 IFNAR1P17181 557 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 FAM45BPQ6NSW5 357 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 IYDQ6PHW0 289 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 RHPN2Q8IUC4 686 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 STRNO43815 780 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 CDH16O75309 829 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 CYP2C19P33261 490 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 BCAR1P56945 870 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 MAPK6Q16659 721 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 RFWD2Q8NHY2 731 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 SGSM3Q96HU1 749 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 C2orf40Q9H1Z8 148 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 TLR2O60603 784 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 NCF4Q15080 339 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 ZNF564Q8TBZ8 553 aaPredicted RBP13.11□□□□□ -0.31
TPR-201ENST00000367478 SRPK1Q96SB4 655 aaKnown RBP13.11□□□□□ -0.31
TPR-201ENST00000367478 MOSPD1Q9UJG1 213 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 PITPNM2Q9BZ72 1349 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 HIST1H2AGP0C0S8 130 aaPredicted RBP13.11□□□□□ -0.31
TPR-201ENST00000367478 HIST1H2ADP20671 130 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 SPDYAQ5MJ70 313 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 SYDE2Q5VT97 1194 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 HIST1H2AHQ96KK5 128 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 HIST1H2AJQ99878 128 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 H2AFJQ9BTM1 129 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 STAP2Q9UGK3 403 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 ZMYM1Q5SVZ6 1142 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 PAGE5Q96GU1 130 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 CCT7Q99832 543 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 ZNF804BA4D1E1 1349 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 EVPLLA8MZ36 301 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 TRIM13O60858 407 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 PDIA2Q13087 525 aaKnown RBP13.11□□□□□ -0.31
TPR-201ENST00000367478 STX3Q13277 289 aa13.11□□□□□ -0.31
TPR-201ENST00000367478 SYNDIG1LA6NDD5 238 aa13.1□□□□□ -0.31
TPR-201ENST00000367478 APOL1O14791 398 aa13.1□□□□□ -0.31
TPR-201ENST00000367478 PTH1RQ03431 593 aa13.1□□□□□ -0.31
TPR-201ENST00000367478 KRT78Q8N1N4 520 aa13.1□□□□□ -0.31
TPR-201ENST00000367478 TCP11X1B4DZS4 312 aa13.1□□□□□ -0.31
TPR-201ENST00000367478 SEC24DO94855 1032 aaPredicted RBP13.1□□□□□ -0.31
TPR-201ENST00000367478 ALBP02768 609 aa13.1□□□□□ -0.31
TPR-201ENST00000367478 ARHGAP17Q68EM7 881 aa13.1□□□□□ -0.31
TPR-201ENST00000367478 C11orf57Q6ZUT1 292 aaPredicted RBP13.1□□□□□ -0.31
TPR-201ENST00000367478 RBBP8Q99708 897 aa13.1□□□□□ -0.31
TPR-201ENST00000367478 SPATA16Q9BXB7 569 aa13.1□□□□□ -0.31
TPR-201ENST00000367478 BBS2Q9BXC9 721 aa13.1□□□□□ -0.31
TPR-201ENST00000367478 SERPINB3P29508 390 aa13.1□□□□□ -0.31
TPR-201ENST00000367478 SLC9A5Q14940 896 aa13.1□□□□□ -0.31
TPR-201ENST00000367478 MICU2Q8IYU8 434 aa13.1□□□□□ -0.31
TPR-201ENST00000367478 PRRG3Q9BZD7 231 aa13.1□□□□□ -0.31
TPR-201ENST00000367478 SAMSN1Q9NSI8 373 aaKnown RBP13.1□□□□□ -0.31
TPR-201ENST00000367478 USP15Q9Y4E8 981 aaPredicted RBP13.1□□□□□ -0.31
TPR-201ENST00000367478 GTF2H3Q13889 308 aa13.1□□□□□ -0.31
TPR-201ENST00000367478 ZBED8Q8IZ13 594 aa13.1□□□□□ -0.31
TPR-201ENST00000367478 NMRK1Q9NWW6 199 aa13.1□□□□□ -0.31
TPR-201ENST00000367478 RESP18Q5W5W9 173 aa13.1□□□□□ -0.31
TPR-201ENST00000367478 CDYLQ9Y232 598 aa13.1□□□□□ -0.31
TPR-201ENST00000367478 POTEFA5A3E0 1075 aa13.1□□□□□ -0.31
TPR-201ENST00000367478 IQCA1LA6NCM1 817 aa13.1□□□□□ -0.31
TPR-201ENST00000367478 BNIP3LO60238 219 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms