RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 PARVAQ9NVD7 372 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 ADA2Q9NZK5 511 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 HERC5Q9UII4 1024 aaKnown RBP16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 H7C1W4 665 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 PRKCBP05771 671 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 MMEP08473 750 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 TMED1Q13445 227 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 AARS2Q5JTZ9 985 aaKnown RBP16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 UBE2Q2Q8WVN8 375 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 KRT87PA6NCN2 255 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 KIAA0391O15091 583 aaKnown RBP16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 KDM1AO60341 852 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 KCNH2Q12809 1159 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 SMYD3Q9H7B4 428 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 PCDHA10Q9Y5I2 948 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 RNF103-CHMP3A0A140T963 221 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 FAM196BA6NMK8 535 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 CAPZA2P47755 286 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 LAMB3Q13751 1172 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 GTF3C2Q8WUA4 911 aaPredicted RBP16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 SAAL1Q96ER3 474 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 CEP95Q96GE4 821 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 CCDC90BQ9GZT6 254 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 POTEB3A0JP26 581 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 POTECB2RU33 542 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 DIAPH2O60879 1101 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 SUPT3HO75486 399 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 AKT1P31749 480 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 PDCLQ13371 301 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 ARHGEF7Q14155 803 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 TKFCQ3LXA3 575 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 POTEBQ6S5H4 581 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 OTULINQ96BN8 352 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 KRT4P19013 534 aa16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 PLEKHF1Q96S99 279 aa16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 SYTL2Q9HCH5 934 aa16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 TTC7AQ9ULT0 858 aaPredicted RBP16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 SH3BP1Q9Y3L3 701 aa16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 NEDD4P46934 1319 aa16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 LRRC53A6NM62 1247 aa16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 CHUKO15111 745 aa16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 KRT14P02533 472 aa16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 HMOX2P30519 316 aa16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 CCDC15Q0P6D6 951 aa16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 GPS1Q13098 491 aa16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 ADGRF4Q8IZF3 695 aa16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 WNT8AQ9H1J5 351 aa16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 PRDX5P30044 214 aa16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 ZNF157P51786 506 aaPredicted RBP16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 STILQ15468 1287 aa16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 C1orf146Q5VVC0 180 aa16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 JPH1Q9HDC5 661 aaPredicted RBP16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 OVOS2A0A0G2JMS6 1433 aa16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 OVOS2A0A0J9YW53 1432 aa16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 OVOS2Q6IE36 1432 aa16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 METP08581 1390 aa16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 PRRG1O14668 218 aa16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 HDAC4P56524 1084 aa16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 PDIA2Q13087 525 aaKnown RBP16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 RGS9BPQ6ZS82 235 aa16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 PID1Q7Z2X4 250 aa16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 WDR48Q8TAF3 677 aa16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 MAD2L2Q9UI95 211 aa16.61■□□□□ 0.25
NUCKS1-201ENST00000367142 IER5Q5VY09 327 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 ZNF579Q8NAF0 562 aaKnown RBP16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 PHF21AQ96BD5 680 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 ELAC2Q9BQ52 826 aaKnown RBP16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 SPATA16Q9BXB7 569 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 TMEM260Q9NX78 707 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 RGL1Q9NZL6 768 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 LGALS16A8MUM7 142 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 F5H6K3 240 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 GRIN3BO60391 1043 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 KRT8P05787 483 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 GUCY2CP25092 1073 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 STAT5BP51692 787 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 CDH6P55285 790 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 KLRC3Q07444 240 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 SNAPC2Q13487 334 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 SNF8Q96H20 258 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 ZFP42Q96MM3 310 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 AIFM3Q96NN9 605 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 HAUS5O94927 633 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 CYFIP1Q7L576 1253 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 ATP11CQ8NB49 1132 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 TIPINQ9BVW5 301 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 RCAN1P53805 252 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 PMS2P54278 862 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 TRADDQ15628 312 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 HLFQ16534 295 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 QRICH1Q2TAL8 776 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 SP8Q8IXZ3 490 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 PARD6BQ9BYG5 372 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 SPON1Q9HCB6 807 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 HACL1Q9UJ83 578 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 NPM3O75607 178 aaKnown RBP16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 RNF149Q8NC42 400 aa16.6■□□□□ 0.25
NUCKS1-201ENST00000367142 B4GALNT2Q8NHY0 566 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms