RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 FAM178BQ8IXR5 827 aa14.59□□□□□ -0.07
PRKN-205ENST00000366897 SYCP3Q8IZU3 236 aa14.59□□□□□ -0.07
PRKN-205ENST00000366897 CYP4X1Q8N118 509 aa14.59□□□□□ -0.07
PRKN-205ENST00000366897 ADAM33Q9BZ11 813 aa14.59□□□□□ -0.07
PRKN-205ENST00000366897 DNAJC18Q9H819 358 aa14.59□□□□□ -0.07
PRKN-205ENST00000366897 AAASQ9NRG9 546 aa14.59□□□□□ -0.07
PRKN-205ENST00000366897 WRAP73Q9P2S5 460 aaPredicted RBP14.59□□□□□ -0.07
PRKN-205ENST00000366897 ASIC3Q9UHC3 531 aa14.59□□□□□ -0.07
PRKN-205ENST00000366897 PLIN4Q96Q06 1357 aa14.58□□□□□ -0.08
PRKN-205ENST00000366897 FRMPD4Q14CM0 1322 aa14.58□□□□□ -0.08
PRKN-205ENST00000366897 EMSYQ7Z589 1322 aa14.58□□□□□ -0.08
PRKN-205ENST00000366897 IL1R1P14778 569 aa14.58□□□□□ -0.08
PRKN-205ENST00000366897 PEX19P40855 299 aa14.58□□□□□ -0.08
PRKN-205ENST00000366897 NAIF1Q69YI7 327 aaPredicted RBP14.58□□□□□ -0.08
PRKN-205ENST00000366897 MBOAT7Q96N66 472 aa14.58□□□□□ -0.08
PRKN-205ENST00000366897 PAIP2Q9BPZ3 127 aaKnown RBP14.58□□□□□ -0.08
PRKN-205ENST00000366897 TRIM6Q9C030 488 aaPredicted RBP14.58□□□□□ -0.08
PRKN-205ENST00000366897 EBF2Q9HAK2 575 aa14.58□□□□□ -0.08
PRKN-205ENST00000366897 PKD2L1Q9P0L9 805 aa14.58□□□□□ -0.08
PRKN-205ENST00000366897 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.58□□□□□ -0.08
PRKN-205ENST00000366897 CCDC189A1A4V9 331 aa14.58□□□□□ -0.08
PRKN-205ENST00000366897 RTN2O75298 545 aa14.58□□□□□ -0.08
PRKN-205ENST00000366897 GDF11O95390 407 aa14.58□□□□□ -0.08
PRKN-205ENST00000366897 RARGP13631 454 aa14.58□□□□□ -0.08
PRKN-205ENST00000366897 PEX5P50542 639 aa14.58□□□□□ -0.08
PRKN-205ENST00000366897 KIAA0825Q8IV33 1275 aa14.58□□□□□ -0.08
PRKN-205ENST00000366897 TBC1D16Q8TBP0 767 aa14.58□□□□□ -0.08
PRKN-205ENST00000366897 CRYGNQ8WXF5 182 aa14.58□□□□□ -0.08
PRKN-205ENST00000366897 L3MBTL3Q96JM7 780 aaPredicted RBP14.58□□□□□ -0.08
PRKN-205ENST00000366897 FAM84AQ96KN4 292 aa14.58□□□□□ -0.08
PRKN-205ENST00000366897 PARVGQ9HBI0 331 aa14.58□□□□□ -0.08
PRKN-205ENST00000366897 PCYOX1Q9UHG3 505 aa14.58□□□□□ -0.08
PRKN-205ENST00000366897 CHRNB2P17787 502 aa14.57□□□□□ -0.08
PRKN-205ENST00000366897 CTNNA2P26232 953 aa14.57□□□□□ -0.08
PRKN-205ENST00000366897 DRG2P55039 364 aaKnown RBP14.57□□□□□ -0.08
PRKN-205ENST00000366897 PPP3CAQ08209 521 aa14.57□□□□□ -0.08
PRKN-205ENST00000366897 ZNF268Q14587 947 aaPredicted RBP14.57□□□□□ -0.08
PRKN-205ENST00000366897 DOK7Q18PE1 504 aa14.57□□□□□ -0.08
PRKN-205ENST00000366897 C2CD6Q53TS8 623 aa14.57□□□□□ -0.08
PRKN-205ENST00000366897 TAOK1Q7L7X3 1001 aa14.57□□□□□ -0.08
PRKN-205ENST00000366897 SLC13A5Q86YT5 568 aaPredicted RBP14.57□□□□□ -0.08
PRKN-205ENST00000366897 FAM163AQ96GL9 167 aaPredicted RBP14.57□□□□□ -0.08
PRKN-205ENST00000366897 TRIM7Q9C029 511 aa14.57□□□□□ -0.08
PRKN-205ENST00000366897 DIS3Q9Y2L1 958 aaKnown RBP14.57□□□□□ -0.08
PRKN-205ENST00000366897 DDX39AO00148 427 aaKnown RBP14.57□□□□□ -0.08
PRKN-205ENST00000366897 TP73O15350 636 aa14.57□□□□□ -0.08
PRKN-205ENST00000366897 SLITRK3O94933 977 aa14.57□□□□□ -0.08
PRKN-205ENST00000366897 CETPP11597 493 aa14.57□□□□□ -0.08
PRKN-205ENST00000366897 KRT17Q04695 432 aa14.57□□□□□ -0.08
PRKN-205ENST00000366897 MGAT5Q09328 741 aa14.57□□□□□ -0.08
PRKN-205ENST00000366897 CALCOCO2Q13137 446 aa14.57□□□□□ -0.08
PRKN-205ENST00000366897 SPDYCQ5MJ68 293 aa14.57□□□□□ -0.08
PRKN-205ENST00000366897 C1orf186Q6ZWK4 172 aa14.57□□□□□ -0.08
PRKN-205ENST00000366897 BZW1Q7L1Q6 419 aaKnown RBP14.57□□□□□ -0.08
PRKN-205ENST00000366897 SRRM1Q8IYB3 904 aaKnown RBP14.57□□□□□ -0.08
PRKN-205ENST00000366897 ART4Q93070 314 aa14.57□□□□□ -0.08
PRKN-205ENST00000366897 FIZ1Q96SL8 496 aa14.57□□□□□ -0.08
PRKN-205ENST00000366897 OLFML3Q9NRN5 406 aa14.57□□□□□ -0.08
PRKN-205ENST00000366897 CHST7Q9NS84 486 aa14.57□□□□□ -0.08
PRKN-205ENST00000366897 HOMER3Q9NSC5 361 aa14.57□□□□□ -0.08
PRKN-205ENST00000366897 CNOT7Q9UIV1 285 aaKnown RBP14.57□□□□□ -0.08
PRKN-205ENST00000366897 PODXLO00592 558 aa14.56□□□□□ -0.08
PRKN-205ENST00000366897 CYP26A1O43174 497 aa14.56□□□□□ -0.08
PRKN-205ENST00000366897 SUN1O94901 812 aa14.56□□□□□ -0.08
PRKN-205ENST00000366897 OAS1P00973 400 aaKnown RBP14.56□□□□□ -0.08
PRKN-205ENST00000366897 BRAFP15056 766 aa14.56□□□□□ -0.08
PRKN-205ENST00000366897 CCNHP51946 323 aaPredicted RBP14.56□□□□□ -0.08
PRKN-205ENST00000366897 COPS2P61201 443 aa14.56□□□□□ -0.08
PRKN-205ENST00000366897 BFSP1Q12934 665 aa14.56□□□□□ -0.08
PRKN-205ENST00000366897 RRP1BQ14684 758 aaKnown RBP14.56□□□□□ -0.08
PRKN-205ENST00000366897 PPP2R5EQ16537 467 aa14.56□□□□□ -0.08
PRKN-205ENST00000366897 EPC2Q52LR7 807 aa14.56□□□□□ -0.08
PRKN-205ENST00000366897 PRR5LQ6MZQ0 368 aa14.56□□□□□ -0.08
PRKN-205ENST00000366897 RNF207Q6ZRF8 634 aa14.56□□□□□ -0.08
PRKN-205ENST00000366897 ZNF720Q7Z2F6 126 aa14.56□□□□□ -0.08
PRKN-205ENST00000366897 SPATA21Q7Z572 469 aa14.56□□□□□ -0.08
PRKN-205ENST00000366897 NOP9Q86U38 636 aaKnown RBP14.56□□□□□ -0.08
PRKN-205ENST00000366897 SLC47A2Q86VL8 602 aa14.56□□□□□ -0.08
PRKN-205ENST00000366897 SLF2Q8IX21 1173 aa14.56□□□□□ -0.08
PRKN-205ENST00000366897 RHOT2Q8IXI1 618 aa14.56□□□□□ -0.08
PRKN-205ENST00000366897 LMO3Q8TAP4 145 aa14.56□□□□□ -0.08
PRKN-205ENST00000366897 MICAL1Q8TDZ2 1067 aa14.56□□□□□ -0.08
PRKN-205ENST00000366897 SPDL1Q96EA4 605 aa14.56□□□□□ -0.08
PRKN-205ENST00000366897 NAP1L4Q99733 375 aaKnown RBP14.56□□□□□ -0.08
PRKN-205ENST00000366897 HERPUD2Q9BSE4 406 aa14.56□□□□□ -0.08
PRKN-205ENST00000366897 CFAP73A6NFT4 308 aa14.56□□□□□ -0.08
PRKN-205ENST00000366897 YBX3P16989 372 aaKnown RBP eCLIP14.56□□□□□ -0.08
PRKN-205ENST00000366897 GPC5P78333 572 aa14.56□□□□□ -0.08
PRKN-205ENST00000366897 KIF22Q14807 665 aa14.56□□□□□ -0.08
PRKN-205ENST00000366897 SIX1Q15475 284 aaPredicted RBP14.56□□□□□ -0.08
PRKN-205ENST00000366897 CDC42EP5Q6NZY7 148 aa14.56□□□□□ -0.08
PRKN-205ENST00000366897 LLGL2Q6P1M3 1020 aa14.56□□□□□ -0.08
PRKN-205ENST00000366897 ANKLE1Q8NAG6 615 aa14.56□□□□□ -0.08
PRKN-205ENST00000366897 SPOCK2Q92563 424 aa14.56□□□□□ -0.08
PRKN-205ENST00000366897 TGS1Q96RS0 853 aaKnown RBP14.56□□□□□ -0.08
PRKN-205ENST00000366897 WDR18Q9BV38 432 aa14.56□□□□□ -0.08
PRKN-205ENST00000366897 NUP85Q9BW27 656 aa14.56□□□□□ -0.08
PRKN-205ENST00000366897 NOP53Q9NZM5 478 aaKnown RBP14.56□□□□□ -0.08
PRKN-205ENST00000366897 PASKQ96RG2 1323 aa14.56□□□□□ -0.08
PRKN-205ENST00000366897 GOLGA8IPA6NC78 632 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms