RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 NFKBIZQ9BYH8 718 aa13.32□□□□□ -0.28
CAPN9-203ENST00000366666 C2orf40Q9H1Z8 148 aa13.32□□□□□ -0.28
CAPN9-203ENST00000366666 L2HGDHQ9H9P8 463 aa13.32□□□□□ -0.28
CAPN9-203ENST00000366666 KCNG1Q9UIX4 513 aa13.32□□□□□ -0.28
CAPN9-203ENST00000366666 KBTBD13C9JR72 458 aa13.32□□□□□ -0.28
CAPN9-203ENST00000366666 DNM1LO00429 736 aa13.32□□□□□ -0.28
CAPN9-203ENST00000366666 PES1O00541 588 aaKnown RBP13.32□□□□□ -0.28
CAPN9-203ENST00000366666 ACKR2O00590 384 aa13.32□□□□□ -0.28
CAPN9-203ENST00000366666 CCP110O43303 1012 aa13.32□□□□□ -0.28
CAPN9-203ENST00000366666 CABYRO75952 493 aa13.32□□□□□ -0.28
CAPN9-203ENST00000366666 HARSP12081 509 aaKnown RBP13.32□□□□□ -0.28
CAPN9-203ENST00000366666 ACOT2P49753 483 aa13.32□□□□□ -0.28
CAPN9-203ENST00000366666 MARSP56192 900 aaKnown RBP13.32□□□□□ -0.28
CAPN9-203ENST00000366666 POU5F1BQ06416 359 aa13.32□□□□□ -0.28
CAPN9-203ENST00000366666 SPAG1Q07617 926 aa13.32□□□□□ -0.28
CAPN9-203ENST00000366666 FAM114A1Q8IWE2 563 aa13.32□□□□□ -0.28
CAPN9-203ENST00000366666 C12orf56Q8IXR9 622 aa13.32□□□□□ -0.28
CAPN9-203ENST00000366666 FAM186BQ8IYM0 893 aa13.32□□□□□ -0.28
CAPN9-203ENST00000366666 DIS3LQ8TF46 1054 aaKnown RBP13.32□□□□□ -0.28
CAPN9-203ENST00000366666 U2AF1L4Q8WU68 220 aaKnown RBP13.32□□□□□ -0.28
CAPN9-203ENST00000366666 NOC4LQ9BVI4 516 aaKnown RBP13.32□□□□□ -0.28
CAPN9-203ENST00000366666 ANK1P16157 1881 aa13.31□□□□□ -0.28
CAPN9-203ENST00000366666 TRIP11Q15643 1979 aa13.31□□□□□ -0.28
CAPN9-203ENST00000366666 TULP1O00294 542 aaPredicted RBP13.31□□□□□ -0.28
CAPN9-203ENST00000366666 FGFR1OPO95684 399 aaKnown RBP13.31□□□□□ -0.28
CAPN9-203ENST00000366666 CHRNA1P02708 482 aa13.31□□□□□ -0.28
CAPN9-203ENST00000366666 ARF4P18085 180 aaPredicted RBP13.31□□□□□ -0.28
CAPN9-203ENST00000366666 PSMC2P35998 433 aaKnown RBP13.31□□□□□ -0.28
CAPN9-203ENST00000366666 KLK7P49862 253 aa13.31□□□□□ -0.28
CAPN9-203ENST00000366666 PRPF4BQ13523 1007 aaKnown RBP13.31□□□□□ -0.28
CAPN9-203ENST00000366666 CRELD2Q6UXH1 353 aaPredicted RBP13.31□□□□□ -0.28
CAPN9-203ENST00000366666 ZNF410Q86VK4 478 aa13.31□□□□□ -0.28
CAPN9-203ENST00000366666 CEP120Q8N960 986 aa13.31□□□□□ -0.28
CAPN9-203ENST00000366666 SLC43A3Q8NBI5 491 aa13.31□□□□□ -0.28
CAPN9-203ENST00000366666 XXYLT1Q8NBI6 393 aa13.31□□□□□ -0.28
CAPN9-203ENST00000366666 GOLGA5Q8TBA6 731 aa13.31□□□□□ -0.28
CAPN9-203ENST00000366666 MRPL4Q9BYD3 311 aaKnown RBP13.31□□□□□ -0.28
CAPN9-203ENST00000366666 PTPRHQ9HD43 1115 aa13.31□□□□□ -0.28
CAPN9-203ENST00000366666 TRMT1Q9NXH9 659 aaKnown RBP13.31□□□□□ -0.28
CAPN9-203ENST00000366666 ARMCX3Q9UH62 379 aaPredicted RBP13.31□□□□□ -0.28
CAPN9-203ENST00000366666 STYXL1Q9Y6J8 313 aa13.31□□□□□ -0.28
CAPN9-203ENST00000366666 A0A0B4J269 797 aa13.31□□□□□ -0.28
CAPN9-203ENST00000366666 VGLL3A8MV65 326 aa13.31□□□□□ -0.28
CAPN9-203ENST00000366666 FAM189A1O60320 539 aa13.31□□□□□ -0.28
CAPN9-203ENST00000366666 TSPAN1O60635 241 aa13.31□□□□□ -0.28
CAPN9-203ENST00000366666 TRIM49P0CI25 452 aa13.31□□□□□ -0.28
CAPN9-203ENST00000366666 TRIM49CP0CI26 452 aa13.31□□□□□ -0.28
CAPN9-203ENST00000366666 DARSP14868 501 aaKnown RBP13.31□□□□□ -0.28
CAPN9-203ENST00000366666 TNFSF9P41273 254 aa13.31□□□□□ -0.28
CAPN9-203ENST00000366666 SNX17Q15036 470 aa13.31□□□□□ -0.28
CAPN9-203ENST00000366666 DCAF17Q5H9S7 520 aaPredicted RBP13.31□□□□□ -0.28
CAPN9-203ENST00000366666 ATF7IP2Q5U623 682 aa13.31□□□□□ -0.28
CAPN9-203ENST00000366666 TAF2Q6P1X5 1199 aa13.31□□□□□ -0.28
CAPN9-203ENST00000366666 SLC35C1Q96A29 364 aa13.31□□□□□ -0.28
CAPN9-203ENST00000366666 ARMC5Q96C12 935 aa13.31□□□□□ -0.28
CAPN9-203ENST00000366666 FAM213AQ9BRX8 229 aa13.31□□□□□ -0.28
CAPN9-203ENST00000366666 NDST4Q9H3R1 872 aa13.31□□□□□ -0.28
CAPN9-203ENST00000366666 CDY2AQ9Y6F7 541 aa13.31□□□□□ -0.28
CAPN9-203ENST00000366666 LGALS16A8MUM7 142 aa13.3□□□□□ -0.28
CAPN9-203ENST00000366666 SGPL1O95470 568 aa13.3□□□□□ -0.28
CAPN9-203ENST00000366666 EPB41P11171 864 aaKnown RBP13.3□□□□□ -0.28
CAPN9-203ENST00000366666 PROZP22891 400 aa13.3□□□□□ -0.28
CAPN9-203ENST00000366666 EIF4BP23588 611 aaKnown RBP13.3□□□□□ -0.28
CAPN9-203ENST00000366666 HOXA11P31270 313 aaPredicted RBP13.3□□□□□ -0.28
CAPN9-203ENST00000366666 PBX1P40424 430 aa13.3□□□□□ -0.28
CAPN9-203ENST00000366666 UBXN1Q04323 297 aa13.3□□□□□ -0.28
CAPN9-203ENST00000366666 GOLGA8FQ08AF8 430 aa13.3□□□□□ -0.28
CAPN9-203ENST00000366666 GOLGA8DPQ0D2H9 430 aa13.3□□□□□ -0.28
CAPN9-203ENST00000366666 SNRNP35Q16560 246 aaKnown RBP13.3□□□□□ -0.28
CAPN9-203ENST00000366666 MAN2A1Q16706 1144 aa13.3□□□□□ -0.28
CAPN9-203ENST00000366666 VWA3BQ502W6 1294 aa13.3□□□□□ -0.28
CAPN9-203ENST00000366666 C1orf220Q5T0J3 134 aa13.3□□□□□ -0.28
CAPN9-203ENST00000366666 ZPBP2Q6X784 338 aa13.3□□□□□ -0.28
CAPN9-203ENST00000366666 TMC6Q7Z403 805 aa13.3□□□□□ -0.28
CAPN9-203ENST00000366666 FRMD5Q7Z6J6 570 aa13.3□□□□□ -0.28
CAPN9-203ENST00000366666 TMEM192Q8IY95 271 aa13.3□□□□□ -0.28
CAPN9-203ENST00000366666 TMEM174Q8WUU8 243 aa13.3□□□□□ -0.28
CAPN9-203ENST00000366666 POP1Q99575 1024 aaKnown RBP13.3□□□□□ -0.28
CAPN9-203ENST00000366666 CELF4Q9BZC1 486 aaKnown RBP13.3□□□□□ -0.28
CAPN9-203ENST00000366666 SENP6Q9GZR1 1112 aaPredicted RBP13.3□□□□□ -0.28
CAPN9-203ENST00000366666 CRISPLD2Q9H0B8 497 aa13.3□□□□□ -0.28
CAPN9-203ENST00000366666 CALCOCO1Q9P1Z2 691 aa13.3□□□□□ -0.28
CAPN9-203ENST00000366666 FRMD4BQ9Y2L6 1034 aa13.3□□□□□ -0.28
CAPN9-203ENST00000366666 CNTNAP2Q9UHC6 1331 aa13.3□□□□□ -0.28
CAPN9-203ENST00000366666 SLC16A3O15427 465 aaKnown RBP13.3□□□□□ -0.28
CAPN9-203ENST00000366666 CLDN3O15551 220 aa13.3□□□□□ -0.28
CAPN9-203ENST00000366666 TOM1L1O75674 476 aa13.3□□□□□ -0.28
CAPN9-203ENST00000366666 TFRCP02786 760 aaKnown RBP13.3□□□□□ -0.28
CAPN9-203ENST00000366666 GARTP22102 1010 aa13.3□□□□□ -0.28
CAPN9-203ENST00000366666 SFPQP23246 707 aaKnown RBP eCLIP13.3□□□□□ -0.28
CAPN9-203ENST00000366666 THPOP40225 353 aa13.3□□□□□ -0.28
CAPN9-203ENST00000366666 MATR3P43243 847 aaKnown RBP eCLIP13.3□□□□□ -0.28
CAPN9-203ENST00000366666 ATN1P54259 1190 aaPredicted RBP13.3□□□□□ -0.28
CAPN9-203ENST00000366666 MRPS6P82932 125 aaKnown RBP13.3□□□□□ -0.28
CAPN9-203ENST00000366666 APBA1Q02410 837 aa13.3□□□□□ -0.28
CAPN9-203ENST00000366666 KCNH2Q12809 1159 aa13.3□□□□□ -0.28
CAPN9-203ENST00000366666 FAM187BQ17R55 369 aa13.3□□□□□ -0.28
CAPN9-203ENST00000366666 TRIM71Q2Q1W2 868 aaKnown RBP13.3□□□□□ -0.28
CAPN9-203ENST00000366666 TCERG1LQ5VWI1 586 aa13.3□□□□□ -0.28
CAPN9-203ENST00000366666 E4F1Q66K89 784 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms