RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 ARMCX5Q6P1M9 558 aa11.76□□□□□ -0.53
SNX6-201ENST00000362031 HS2ST1Q7LGA3 356 aa11.76□□□□□ -0.53
SNX6-201ENST00000362031 C7orf61Q8IZ16 206 aa11.76□□□□□ -0.53
SNX6-201ENST00000362031 DBF4BQ8NFT6 615 aa11.76□□□□□ -0.53
SNX6-201ENST00000362031 TCHPQ9BT92 498 aa11.76□□□□□ -0.53
SNX6-201ENST00000362031 IFIH1Q9BYX4 1025 aaKnown RBP11.76□□□□□ -0.53
SNX6-201ENST00000362031 NAT10Q9H0A0 1025 aaKnown RBP11.76□□□□□ -0.53
SNX6-201ENST00000362031 EXOC7Q9UPT5 735 aa11.76□□□□□ -0.53
SNX6-201ENST00000362031 TANC1Q9C0D5 1861 aa11.76□□□□□ -0.53
SNX6-201ENST00000362031 CHD9Q3L8U1 2897 aa11.76□□□□□ -0.53
SNX6-201ENST00000362031 IKBKBO14920 756 aa11.76□□□□□ -0.53
SNX6-201ENST00000362031 CLDN3O15551 220 aa11.76□□□□□ -0.53
SNX6-201ENST00000362031 CALUO43852 315 aaPredicted RBP11.76□□□□□ -0.53
SNX6-201ENST00000362031 KIF20AO95235 890 aa11.76□□□□□ -0.53
SNX6-201ENST00000362031 NPTXRO95502 500 aa11.76□□□□□ -0.53
SNX6-201ENST00000362031 TIMP1P01033 207 aa11.76□□□□□ -0.53
SNX6-201ENST00000362031 FKBP3Q00688 224 aaKnown RBP11.76□□□□□ -0.53
SNX6-201ENST00000362031 ZNF568Q3ZCX4 644 aa11.76□□□□□ -0.53
SNX6-201ENST00000362031 SCARA3Q6AZY7 606 aa11.76□□□□□ -0.53
SNX6-201ENST00000362031 MPZL3Q6UWV2 235 aa11.76□□□□□ -0.53
SNX6-201ENST00000362031 C12orf56Q8IXR9 622 aa11.76□□□□□ -0.53
SNX6-201ENST00000362031 THNSL1Q8IYQ7 743 aa11.76□□□□□ -0.53
SNX6-201ENST00000362031 ZNF710Q8N1W2 664 aa11.76□□□□□ -0.53
SNX6-201ENST00000362031 NOC3LQ8WTT2 800 aaKnown RBP11.76□□□□□ -0.53
SNX6-201ENST00000362031 BORCS6Q96GS4 357 aa11.76□□□□□ -0.53
SNX6-201ENST00000362031 FAM213AQ9BRX8 229 aa11.76□□□□□ -0.53
SNX6-201ENST00000362031 MSTO1Q9BUK6 570 aa11.76□□□□□ -0.53
SNX6-201ENST00000362031 CHD7Q9P2D1 2997 aa11.75□□□□□ -0.53
SNX6-201ENST00000362031 BICDL2A1A5D9 508 aa11.75□□□□□ -0.53
SNX6-201ENST00000362031 RPLP2P05387 115 aaKnown RBP11.75□□□□□ -0.53
SNX6-201ENST00000362031 GARTP22102 1010 aa11.75□□□□□ -0.53
SNX6-201ENST00000362031 SCP2P22307 547 aa11.75□□□□□ -0.53
SNX6-201ENST00000362031 PPP1R2P41236 205 aa11.75□□□□□ -0.53
SNX6-201ENST00000362031 NOLC1Q14978 699 aaKnown RBP eCLIP11.75□□□□□ -0.53
SNX6-201ENST00000362031 NFIL3Q16649 462 aa11.75□□□□□ -0.53
SNX6-201ENST00000362031 TMEM132AQ24JP5 1023 aa11.75□□□□□ -0.53
SNX6-201ENST00000362031 PLEKHG4Q58EX7 1191 aa11.75□□□□□ -0.53
SNX6-201ENST00000362031 CEP135Q66GS9 1140 aa11.75□□□□□ -0.53
SNX6-201ENST00000362031 C16orf59Q7L2K0 433 aa11.75□□□□□ -0.53
SNX6-201ENST00000362031 APTXQ7Z2E3 356 aaKnown RBP11.75□□□□□ -0.53
SNX6-201ENST00000362031 SLC9A9Q8IVB4 645 aa11.75□□□□□ -0.53
SNX6-201ENST00000362031 CCDC155Q8N6L0 562 aa11.75□□□□□ -0.53
SNX6-201ENST00000362031 SMG8Q8ND04 991 aaKnown RBP11.75□□□□□ -0.53
SNX6-201ENST00000362031 TMEM174Q8WUU8 243 aa11.75□□□□□ -0.53
SNX6-201ENST00000362031 FBXL18Q96ME1 805 aa11.75□□□□□ -0.53
SNX6-201ENST00000362031 NXF3Q9H4D5 531 aaKnown RBP11.75□□□□□ -0.53
SNX6-201ENST00000362031 AGO2Q9UKV8 859 aaKnown RBP11.75□□□□□ -0.53
SNX6-201ENST00000362031 FSD2A1L4K1 749 aa11.74□□□□□ -0.53
SNX6-201ENST00000362031 GPR182O15218 404 aa11.74□□□□□ -0.53
SNX6-201ENST00000362031 EXOC3O60645 756 aa11.74□□□□□ -0.53
SNX6-201ENST00000362031 CXCL10P02778 98 aa11.74□□□□□ -0.53
SNX6-201ENST00000362031 ACRP10323 421 aa11.74□□□□□ -0.53
SNX6-201ENST00000362031 MATR3P43243 847 aaKnown RBP eCLIP11.74□□□□□ -0.53
SNX6-201ENST00000362031 AFF1P51825 1210 aaKnown RBP11.74□□□□□ -0.53
SNX6-201ENST00000362031 EPHB4P54760 987 aa11.74□□□□□ -0.53
SNX6-201ENST00000362031 DLG4P78352 724 aa11.74□□□□□ -0.53
SNX6-201ENST00000362031 PTPN21Q16825 1174 aa11.74□□□□□ -0.53
SNX6-201ENST00000362031 NOTUMQ6P988 496 aa11.74□□□□□ -0.53
SNX6-201ENST00000362031 SLC27A1Q6PCB7 646 aa11.74□□□□□ -0.53
SNX6-201ENST00000362031 XXYLT1Q8NBI6 393 aa11.74□□□□□ -0.53
SNX6-201ENST00000362031 POP1Q99575 1024 aaKnown RBP11.74□□□□□ -0.53
SNX6-201ENST00000362031 TSG101Q99816 390 aa11.74□□□□□ -0.53
SNX6-201ENST00000362031 ADAM2Q99965 735 aa11.74□□□□□ -0.53
SNX6-201ENST00000362031 ZMYND8Q9ULU4 1186 aaPredicted RBP11.74□□□□□ -0.53
SNX6-201ENST00000362031 BECN2A8MW95 431 aa11.74□□□□□ -0.53
SNX6-201ENST00000362031 CAVIN2O95810 425 aa11.74□□□□□ -0.53
SNX6-201ENST00000362031 RAG1P15918 1043 aa11.74□□□□□ -0.53
SNX6-201ENST00000362031 ATF7P17544 494 aaPredicted RBP11.74□□□□□ -0.53
SNX6-201ENST00000362031 IBSPP21815 317 aaPredicted RBP11.74□□□□□ -0.53
SNX6-201ENST00000362031 AKAP5P24588 427 aa11.74□□□□□ -0.53
SNX6-201ENST00000362031 ABCD1P33897 745 aa11.74□□□□□ -0.53
SNX6-201ENST00000362031 SNRNP35Q16560 246 aaKnown RBP11.74□□□□□ -0.53
SNX6-201ENST00000362031 C1orf220Q5T0J3 134 aa11.74□□□□□ -0.53
SNX6-201ENST00000362031 TWF2Q6IBS0 349 aaKnown RBP11.74□□□□□ -0.53
SNX6-201ENST00000362031 FOXR2Q6PJQ5 311 aa11.74□□□□□ -0.53
SNX6-201ENST00000362031 CREBRFQ8IUR6 639 aa11.74□□□□□ -0.53
SNX6-201ENST00000362031 GOLGA5Q8TBA6 731 aa11.74□□□□□ -0.53
SNX6-201ENST00000362031 BADQ92934 168 aa11.74□□□□□ -0.53
SNX6-201ENST00000362031 LPPQ93052 612 aa11.74□□□□□ -0.53
SNX6-201ENST00000362031 SNTG2Q9NY99 539 aa11.74□□□□□ -0.53
SNX6-201ENST00000362031 SQORQ9Y6N5 450 aa11.74□□□□□ -0.53
SNX6-201ENST00000362031 TRIP11Q15643 1979 aa11.73□□□□□ -0.53
SNX6-201ENST00000362031 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.73□□□□□ -0.53
SNX6-201ENST00000362031 CETN3O15182 167 aa11.73□□□□□ -0.53
SNX6-201ENST00000362031 STAG3L1P0CL83 205 aa11.73□□□□□ -0.53
SNX6-201ENST00000362031 SPAG1Q07617 926 aa11.73□□□□□ -0.53
SNX6-201ENST00000362031 PCBP1Q15365 356 aaKnown RBP eCLIP11.73□□□□□ -0.532e-8■■■■■ 73.5
SNX6-201ENST00000362031 ENOX2Q16206 610 aaKnown RBP11.73□□□□□ -0.53
SNX6-201ENST00000362031 TPD52L1Q16890 204 aaPredicted RBP11.73□□□□□ -0.53
SNX6-201ENST00000362031 MFSD5Q6N075 450 aa11.73□□□□□ -0.53
SNX6-201ENST00000362031 FILIP1Q7Z7B0 1213 aa11.73□□□□□ -0.53
SNX6-201ENST00000362031 GPD1LQ8N335 351 aa11.73□□□□□ -0.53
SNX6-201ENST00000362031 USP38Q8NB14 1042 aa11.73□□□□□ -0.53
SNX6-201ENST00000362031 CNOT6LQ96LI5 555 aaKnown RBP11.73□□□□□ -0.53
SNX6-201ENST00000362031 TOPORSQ9NS56 1045 aaPredicted RBP11.73□□□□□ -0.53
SNX6-201ENST00000362031 CPSF3Q9UKF6 684 aaKnown RBP11.73□□□□□ -0.53
SNX6-201ENST00000362031 IPPQ9Y573 584 aa11.73□□□□□ -0.53
SNX6-201ENST00000362031 PCDHB2Q9Y5E7 798 aa11.73□□□□□ -0.53
SNX6-201ENST00000362031 PTPRJQ12913 1337 aa11.73□□□□□ -0.53
SNX6-201ENST00000362031 KCNJ18B7U540 433 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms