RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 RAB17Q9H0T7 212 aa11.39□□□□□ -0.59
SMC3-201ENST00000361804 BAIAP2L1Q9UHR4 511 aa11.39□□□□□ -0.59
SMC3-201ENST00000361804 SERPINA10Q9UK55 444 aa11.39□□□□□ -0.59
SMC3-201ENST00000361804 DICER1Q9UPY3 1922 aaKnown RBP11.39□□□□□ -0.59
SMC3-201ENST00000361804 SSC5DA1L4H1 1573 aa11.39□□□□□ -0.59
SMC3-201ENST00000361804 CLTAP09496 248 aa11.39□□□□□ -0.59
SMC3-201ENST00000361804 CHRNB2P17787 502 aa11.39□□□□□ -0.59
SMC3-201ENST00000361804 CDR1P51861 262 aa11.39□□□□□ -0.59
SMC3-201ENST00000361804 C1orf220Q5T0J3 134 aa11.39□□□□□ -0.59
SMC3-201ENST00000361804 BTNL9Q6UXG8 535 aa11.39□□□□□ -0.59
SMC3-201ENST00000361804 PNMA8AQ86V59 439 aaPredicted RBP11.39□□□□□ -0.59
SMC3-201ENST00000361804 IL31RAQ8NI17 732 aa11.39□□□□□ -0.59
SMC3-201ENST00000361804 POLR3CQ9BUI4 534 aaPredicted RBP11.39□□□□□ -0.59
SMC3-201ENST00000361804 CARD9Q9H257 536 aa11.39□□□□□ -0.59
SMC3-201ENST00000361804 NYAP2Q9P242 653 aa11.39□□□□□ -0.59
SMC3-201ENST00000361804 PI4KBQ9UBF8 816 aa11.39□□□□□ -0.59
SMC3-201ENST00000361804 TRIM33Q9UPN9 1127 aa11.39□□□□□ -0.59
SMC3-201ENST00000361804 L3MBTL1Q9Y468 752 aa11.39□□□□□ -0.59
SMC3-201ENST00000361804 ANKRD62A6NC57 917 aa11.38□□□□□ -0.59
SMC3-201ENST00000361804 A8MUI8 341 aa11.38□□□□□ -0.59
SMC3-201ENST00000361804 TCP10L2B9ZVM9 353 aa11.38□□□□□ -0.59
SMC3-201ENST00000361804 SORBS3O60504 671 aa11.38□□□□□ -0.59
SMC3-201ENST00000361804 MAP3K10Q02779 954 aa11.38□□□□□ -0.59
SMC3-201ENST00000361804 GMCL1P1Q8NEA9 526 aa11.38□□□□□ -0.59
SMC3-201ENST00000361804 SEMA4DQ92854 862 aa11.38□□□□□ -0.59
SMC3-201ENST00000361804 ZNF577Q9BSK1 485 aa11.38□□□□□ -0.59
SMC3-201ENST00000361804 PI4K2AQ9BTU6 479 aa11.38□□□□□ -0.59
SMC3-201ENST00000361804 INTS9Q9NV88 658 aaKnown RBP11.38□□□□□ -0.59
SMC3-201ENST00000361804 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.38□□□□□ -0.59
SMC3-201ENST00000361804 ASTN2O75129 1339 aaPredicted RBP11.38□□□□□ -0.59
SMC3-201ENST00000361804 ATXN2Q99700 1313 aaKnown RBP11.38□□□□□ -0.59
SMC3-201ENST00000361804 GOLGA6L10A0A0M3HER8 536 aa11.38□□□□□ -0.59
SMC3-201ENST00000361804 HP1BP3Q5SSJ5 553 aaPredicted RBP11.38□□□□□ -0.59
SMC3-201ENST00000361804 CCDC91Q7Z6B0 441 aa11.38□□□□□ -0.59
SMC3-201ENST00000361804 SPATS2Q86XZ4 545 aaKnown RBP11.38□□□□□ -0.59
SMC3-201ENST00000361804 PRCCQ92733 491 aaPredicted RBP11.38□□□□□ -0.59
SMC3-201ENST00000361804 MYCBPQ99417 103 aaPredicted RBP11.38□□□□□ -0.59
SMC3-201ENST00000361804 ZSWIM1Q9BR11 485 aa11.38□□□□□ -0.59
SMC3-201ENST00000361804 CXorf56Q9H5V9 222 aa11.38□□□□□ -0.59
SMC3-201ENST00000361804 TRPC6Q9Y210 931 aa11.38□□□□□ -0.59
SMC3-201ENST00000361804 ZBTB12Q9Y330 459 aaPredicted RBP11.38□□□□□ -0.59
SMC3-201ENST00000361804 C5orf60A6NFR6 353 aa11.38□□□□□ -0.59
SMC3-201ENST00000361804 SPOPO43791 374 aa11.38□□□□□ -0.59
SMC3-201ENST00000361804 SETQ01105 290 aaPredicted RBP11.38□□□□□ -0.59
SMC3-201ENST00000361804 SLC15A2Q16348 729 aa11.38□□□□□ -0.59
SMC3-201ENST00000361804 CCDC17Q96LX7 622 aa11.38□□□□□ -0.59
SMC3-201ENST00000361804 KREMEN1Q96MU8 473 aa11.38□□□□□ -0.59
SMC3-201ENST00000361804 NAP1L4Q99733 375 aaKnown RBP11.38□□□□□ -0.59
SMC3-201ENST00000361804 PCDHA3Q9Y5H8 950 aa11.38□□□□□ -0.59
SMC3-201ENST00000361804 EIF4E1BA6NMX2 242 aaKnown RBP11.37□□□□□ -0.59
SMC3-201ENST00000361804 PHF2O75151 1096 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 ADRB2P07550 413 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 KCNJ2P63252 427 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 EN1Q05925 392 aaPredicted RBP11.37□□□□□ -0.59
SMC3-201ENST00000361804 MIGA2Q7L4E1 593 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 TEPSINQ96N21 525 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 CSRNP1Q96S65 589 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 NUP85Q9BW27 656 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 WDR11Q9BZH6 1224 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 CHST7Q9NS84 486 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 HOMER2Q9NSB8 354 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 FGFR1OP2Q9NVK5 253 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 DMAC2Q9NW81 257 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 GTPBP10A4D1E9 387 aaKnown RBP11.37□□□□□ -0.59
SMC3-201ENST00000361804 TBX3O15119 743 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 PAEPP09466 180 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 GJC1P36383 396 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 PEX5P50542 639 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 NPEPPSP55786 919 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 SPP2Q13103 211 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 AUHQ13825 339 aaKnown RBP11.37□□□□□ -0.59
SMC3-201ENST00000361804 SNCBQ16143 134 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 LMBRD2Q68DH5 695 aaPredicted RBP11.37□□□□□ -0.59
SMC3-201ENST00000361804 CBWD2Q8IUF1 395 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 CCDC197Q8NCU1 140 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 HEMGNQ9BXL5 484 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 COL20A1Q9P218 1284 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 TELO2Q9Y4R8 837 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 PFASO15067 1338 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 ARHGEF35A5YM69 484 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 TP73O15350 636 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 SLC16A4O15374 487 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 RIPK2O43353 540 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 CIITAP33076 1130 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 MMP13P45452 471 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 MPP2Q14168 576 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 MOXD1Q6UVY6 613 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 EXOC3L1Q86VI1 746 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 GMCL1Q96IK5 515 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 PNMA3Q9UL41 463 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 INTUQ9ULD6 942 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 CCT8L1PA6NM43 557 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 CHUKO15111 745 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 RDXP35241 583 aaKnown RBP11.37□□□□□ -0.59
SMC3-201ENST00000361804 PDE6BP35913 854 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 KIF22Q14807 665 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 PADI6Q6TGC4 694 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 EIF1ADQ8N9N8 165 aaKnown RBP11.37□□□□□ -0.59
SMC3-201ENST00000361804 EPS8L1Q8TE68 723 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms