RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 CCDC38Q502W7 563 aa19.74■□□□□ 0.75
CLIP2-202ENST00000361545 CCDC197Q8NCU1 140 aa19.74■□□□□ 0.75
CLIP2-202ENST00000361545 PI4K2BG5E9Z4 385 aa19.74■□□□□ 0.75
CLIP2-202ENST00000361545 RFC5P40937 340 aa19.74■□□□□ 0.75
CLIP2-202ENST00000361545 CUL1Q13616 776 aa19.74■□□□□ 0.75
CLIP2-202ENST00000361545 HP1BP3Q5SSJ5 553 aaPredicted RBP19.74■□□□□ 0.75
CLIP2-202ENST00000361545 PDXDC1Q6P996 788 aa19.74■□□□□ 0.75
CLIP2-202ENST00000361545 KIDINS220Q9ULH0 1771 aa19.74■□□□□ 0.75
CLIP2-202ENST00000361545 CLTAP09496 248 aa19.74■□□□□ 0.75
CLIP2-202ENST00000361545 FCGRTP55899 365 aa19.74■□□□□ 0.75
CLIP2-202ENST00000361545 TAF1BQ53T94 588 aaPredicted RBP19.74■□□□□ 0.75
CLIP2-202ENST00000361545 AGPAT1Q99943 283 aa19.74■□□□□ 0.75
CLIP2-202ENST00000361545 LCMT1Q9UIC8 334 aa19.74■□□□□ 0.75
CLIP2-202ENST00000361545 KIAA0391O15091 583 aaKnown RBP19.73■□□□□ 0.75
CLIP2-202ENST00000361545 ITGA4P13612 1032 aa19.73■□□□□ 0.75
CLIP2-202ENST00000361545 CDK17Q00537 523 aa19.73■□□□□ 0.75
CLIP2-202ENST00000361545 CCDC144BQ3MJ40 725 aa19.73■□□□□ 0.75
CLIP2-202ENST00000361545 DCAF4L1Q3SXM0 396 aa19.73■□□□□ 0.75
CLIP2-202ENST00000361545 CC2D1AQ6P1N0 951 aaPredicted RBP19.73■□□□□ 0.75
CLIP2-202ENST00000361545 C7orf25Q9BPX7 421 aa19.73■□□□□ 0.75
CLIP2-202ENST00000361545 ABCB6Q9NP58 842 aa19.73■□□□□ 0.75
CLIP2-202ENST00000361545 SARS2Q9NP81 518 aaKnown RBP19.73■□□□□ 0.75
CLIP2-202ENST00000361545 PGK2P07205 417 aa19.73■□□□□ 0.75
CLIP2-202ENST00000361545 MYBL1P10243 752 aa19.73■□□□□ 0.75
CLIP2-202ENST00000361545 NBPF12Q5TAG4 269 aaPredicted RBP19.73■□□□□ 0.75
CLIP2-202ENST00000361545 ATF7IP2Q5U623 682 aa19.73■□□□□ 0.75
CLIP2-202ENST00000361545 CDR2LQ86X02 465 aaPredicted RBP19.73■□□□□ 0.75
CLIP2-202ENST00000361545 RHOT1Q8IXI2 618 aa19.73■□□□□ 0.75
CLIP2-202ENST00000361545 PARVAQ9NVD7 372 aa19.73■□□□□ 0.75
CLIP2-202ENST00000361545 HACD3Q9P035 362 aa19.73■□□□□ 0.75
CLIP2-202ENST00000361545 DFFAO00273 331 aa19.73■□□□□ 0.75
CLIP2-202ENST00000361545 MAFGO15525 162 aa19.73■□□□□ 0.75
CLIP2-202ENST00000361545 FDPSP14324 419 aaKnown RBP19.73■□□□□ 0.75
CLIP2-202ENST00000361545 PHLDB3Q6NSJ2 640 aa19.73■□□□□ 0.75
CLIP2-202ENST00000361545 SLC30A5Q8TAD4 765 aa19.73■□□□□ 0.75
CLIP2-202ENST00000361545 ASIC4Q96FT7 647 aa19.73■□□□□ 0.75
CLIP2-202ENST00000361545 MMTAG2Q9BU76 263 aaKnown RBP19.73■□□□□ 0.75
CLIP2-202ENST00000361545 CYP26B1Q9NR63 512 aa19.73■□□□□ 0.75
CLIP2-202ENST00000361545 ZC3H13Q5T200 1668 aaKnown RBP19.73■□□□□ 0.75
CLIP2-202ENST00000361545 HBP1O60381 514 aa19.73■□□□□ 0.75
CLIP2-202ENST00000361545 KRT37O76014 449 aa19.73■□□□□ 0.75
CLIP2-202ENST00000361545 ICAM1P05362 532 aa19.73■□□□□ 0.75
CLIP2-202ENST00000361545 PAPOLAP51003 745 aaKnown RBP19.73■□□□□ 0.75
CLIP2-202ENST00000361545 MUM1Q2TAK8 710 aa19.73■□□□□ 0.75
CLIP2-202ENST00000361545 KAZALD1Q96I82 304 aa19.73■□□□□ 0.75
CLIP2-202ENST00000361545 EDEM3Q9BZQ6 932 aa19.73■□□□□ 0.75
CLIP2-202ENST00000361545 TJP2Q9UDY2 1190 aa19.73■□□□□ 0.75
CLIP2-202ENST00000361545 A0A1B0GUA9 196 aa19.73■□□□□ 0.75
CLIP2-202ENST00000361545 DDNO94850 711 aaPredicted RBP19.73■□□□□ 0.75
CLIP2-202ENST00000361545 CCDC151A5D8V7 595 aa19.72■□□□□ 0.75
CLIP2-202ENST00000361545 YWHAHQ04917 246 aaPredicted RBP19.72■□□□□ 0.75
CLIP2-202ENST00000361545 DPYDQ12882 1025 aa19.72■□□□□ 0.75
CLIP2-202ENST00000361545 TTC36A6NLP5 189 aa19.72■□□□□ 0.75
CLIP2-202ENST00000361545 SLC16A3O15427 465 aaKnown RBP19.72■□□□□ 0.75
CLIP2-202ENST00000361545 ZC3H18Q86VM9 953 aaKnown RBP19.72■□□□□ 0.75
CLIP2-202ENST00000361545 ERO1BQ86YB8 467 aa19.72■□□□□ 0.75
CLIP2-202ENST00000361545 GLT1D1Q96MS3 346 aa19.72■□□□□ 0.75
CLIP2-202ENST00000361545 DDX47Q9H0S4 455 aaKnown RBP19.72■□□□□ 0.75
CLIP2-202ENST00000361545 FARP1Q9Y4F1 1045 aaPredicted RBP19.72■□□□□ 0.75
CLIP2-202ENST00000361545 HMBSP08397 361 aa19.72■□□□□ 0.75
CLIP2-202ENST00000361545 IFT88Q13099 833 aa19.72■□□□□ 0.75
CLIP2-202ENST00000361545 LAMC2Q13753 1193 aa19.72■□□□□ 0.75
CLIP2-202ENST00000361545 GLB1LQ6UWU2 654 aa19.72■□□□□ 0.75
CLIP2-202ENST00000361545 FRA10AC1Q70Z53 315 aa19.72■□□□□ 0.75
CLIP2-202ENST00000361545 ADSSL1Q8N142 457 aa19.72■□□□□ 0.75
CLIP2-202ENST00000361545 GOLGA8QA0A0J9YX86 632 aa19.72■□□□□ 0.75
CLIP2-202ENST00000361545 GOLGA8OA6NCC3 632 aa19.72■□□□□ 0.75
CLIP2-202ENST00000361545 GOLGA8NF8WBI6 632 aa19.72■□□□□ 0.75
CLIP2-202ENST00000361545 H3BRJ5 948 aa19.72■□□□□ 0.75
CLIP2-202ENST00000361545 SCP2P22307 547 aa19.72■□□□□ 0.75
CLIP2-202ENST00000361545 CPT1AP50416 773 aa19.72■□□□□ 0.75
CLIP2-202ENST00000361545 BACE1P56817 501 aa19.72■□□□□ 0.75
CLIP2-202ENST00000361545 CPA5Q8WXQ8 436 aa19.72■□□□□ 0.75
CLIP2-202ENST00000361545 FGD4Q96M96 766 aa19.72■□□□□ 0.75
CLIP2-202ENST00000361545 DDTLA6NHG4 134 aaPredicted RBP19.71■□□□□ 0.75
CLIP2-202ENST00000361545 NCF2P19878 526 aaPredicted RBP19.71■□□□□ 0.75
CLIP2-202ENST00000361545 TROAPQ12815 778 aa19.71■□□□□ 0.75
CLIP2-202ENST00000361545 SEMA3FQ13275 785 aa19.71■□□□□ 0.75
CLIP2-202ENST00000361545 SDCCAG3Q96C92 435 aa19.71■□□□□ 0.75
CLIP2-202ENST00000361545 KLHL11Q9NVR0 708 aa19.71■□□□□ 0.75
CLIP2-202ENST00000361545 NLRP11P59045 1033 aaKnown RBP19.71■□□□□ 0.75
CLIP2-202ENST00000361545 FMR1Q06787 632 aaKnown RBP eCLIP19.71■□□□□ 0.75
CLIP2-202ENST00000361545 YAF2Q8IY57 180 aa19.71■□□□□ 0.75
CLIP2-202ENST00000361545 C18orf8Q96DM3 657 aa19.71■□□□□ 0.75
CLIP2-202ENST00000361545 KIFC3Q9BVG8 833 aa19.71■□□□□ 0.75
CLIP2-202ENST00000361545 HDAC6Q9UBN7 1215 aa19.71■□□□□ 0.75
CLIP2-202ENST00000361545 A0A1W2PQC6 194 aa19.71■□□□□ 0.75
CLIP2-202ENST00000361545 ASAP2O43150 1006 aa19.71■□□□□ 0.75
CLIP2-202ENST00000361545 TTC4O95801 387 aa19.71■□□□□ 0.75
CLIP2-202ENST00000361545 FMO5P49326 533 aa19.71■□□□□ 0.75
CLIP2-202ENST00000361545 GPS1Q13098 491 aa19.71■□□□□ 0.75
CLIP2-202ENST00000361545 C3orf67Q6ZVT6 689 aa19.71■□□□□ 0.75
CLIP2-202ENST00000361545 MAP3K14Q99558 947 aa19.71■□□□□ 0.75
CLIP2-202ENST00000361545 KCND2Q9NZV8 630 aa19.71■□□□□ 0.75
CLIP2-202ENST00000361545 APEX2Q9UBZ4 518 aa19.71■□□□□ 0.75
CLIP2-202ENST00000361545 MID2Q9UJV3 735 aa19.71■□□□□ 0.75
CLIP2-202ENST00000361545 RPA1P27694 616 aa19.71■□□□□ 0.75
CLIP2-202ENST00000361545 OR1G1P47890 313 aa19.71■□□□□ 0.75
CLIP2-202ENST00000361545 DPF2Q92785 391 aa19.71■□□□□ 0.75
CLIP2-202ENST00000361545 NCOA3Q9Y6Q9 1424 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms