RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 PRPF31Q8WWY3 499 aaKnown RBP14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 PSPC1Q8WXF1 523 aaKnown RBP14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 CCDC42Q96M95 316 aa14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 AGPAT5Q9NUQ2 364 aa14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 ARHGAP28Q9P2N2 729 aa14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 TRIM10Q9UDY6 481 aa14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 Q9Y3F1 56 aa14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 RBAK-RBAKDNI3L0D1 243 aa14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 AKAP3O75969 853 aa14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 ATP1A1P05023 1023 aaKnown RBP14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 EDN1P05305 212 aa14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 CCND3P30281 292 aaPredicted RBP14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 CPT1AP50416 773 aa14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 CYP2J2P51589 502 aa14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 CLCN3P51790 818 aa14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 MAP4K3Q8IVH8 894 aa14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 ZSWIM2Q8NEG5 633 aa14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 MKNK1Q9BUB5 465 aa14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 VPS18Q9P253 973 aa14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 ANKRD63C9JTQ0 380 aa14.28□□□□□ -0.12
SQSTM1-201ENST00000360718 ENC1O14682 589 aa14.28□□□□□ -0.12
SQSTM1-201ENST00000360718 MAGEB2O15479 319 aa14.28□□□□□ -0.12
SQSTM1-201ENST00000360718 EXOC3O60645 756 aa14.28□□□□□ -0.12
SQSTM1-201ENST00000360718 F2P00734 622 aa14.28□□□□□ -0.12
SQSTM1-201ENST00000360718 HOXD10P28358 340 aa14.28□□□□□ -0.12
SQSTM1-201ENST00000360718 LMAN1P49257 510 aa14.28□□□□□ -0.12
SQSTM1-201ENST00000360718 VAV2P52735 878 aa14.28□□□□□ -0.12
SQSTM1-201ENST00000360718 MARCH8Q5T0T0 291 aa14.28□□□□□ -0.12
SQSTM1-201ENST00000360718 SLC39A4Q6P5W5 647 aa14.28□□□□□ -0.12
SQSTM1-201ENST00000360718 TRIM59Q8IWR1 403 aa14.28□□□□□ -0.12
SQSTM1-201ENST00000360718 FAM186BQ8IYM0 893 aa14.28□□□□□ -0.12
SQSTM1-201ENST00000360718 CAGE1Q8TC20 777 aa14.28□□□□□ -0.12
SQSTM1-201ENST00000360718 BICD1Q96G01 975 aa14.28□□□□□ -0.12
SQSTM1-201ENST00000360718 ZNF668Q96K58 619 aaPredicted RBP14.28□□□□□ -0.12
SQSTM1-201ENST00000360718 TRIP12Q14669 1992 aaPredicted RBP14.28□□□□□ -0.12
SQSTM1-201ENST00000360718 A0A0U1RQG5 324 aaPredicted RBP14.27□□□□□ -0.12
SQSTM1-201ENST00000360718 K7ERI5 159 aa14.27□□□□□ -0.12
SQSTM1-201ENST00000360718 PRKAR2AP13861 404 aaKnown RBP14.27□□□□□ -0.12
SQSTM1-201ENST00000360718 KLRC1P26715 233 aa14.27□□□□□ -0.12
SQSTM1-201ENST00000360718 CNGA1P29973 690 aa14.27□□□□□ -0.12
SQSTM1-201ENST00000360718 HIC1Q14526 733 aa14.27□□□□□ -0.12
SQSTM1-201ENST00000360718 EFCAB12Q6NXP0 572 aa14.27□□□□□ -0.12
SQSTM1-201ENST00000360718 LEKR1Q6ZMV7 388 aa14.27□□□□□ -0.12
SQSTM1-201ENST00000360718 C12orf56Q8IXR9 622 aa14.27□□□□□ -0.12
SQSTM1-201ENST00000360718 METTL13Q8N6R0 699 aa14.27□□□□□ -0.12
SQSTM1-201ENST00000360718 SECISBP2LQ93073 1101 aaKnown RBP14.27□□□□□ -0.12
SQSTM1-201ENST00000360718 CBWD1Q9BRT8 395 aa14.27□□□□□ -0.12
SQSTM1-201ENST00000360718 DMAC2Q9NW81 257 aa14.27□□□□□ -0.12
SQSTM1-201ENST00000360718 DUSP11O75319 330 aaKnown RBP14.27□□□□□ -0.13
SQSTM1-201ENST00000360718 PGK1P00558 417 aa14.27□□□□□ -0.13
SQSTM1-201ENST00000360718 TFRCP02786 760 aaKnown RBP14.27□□□□□ -0.13
SQSTM1-201ENST00000360718 ADSSP30520 456 aa14.27□□□□□ -0.13
SQSTM1-201ENST00000360718 HNRNPH3P31942 346 aaKnown RBP14.27□□□□□ -0.13
SQSTM1-201ENST00000360718 FSCN1Q16658 493 aaKnown RBP14.27□□□□□ -0.13
SQSTM1-201ENST00000360718 ZSCAN26Q16670 478 aa14.27□□□□□ -0.13
SQSTM1-201ENST00000360718 LINC01465Q8N7H1 131 aa14.27□□□□□ -0.13
SQSTM1-201ENST00000360718 GOLGA6L1Q8N7Z2 621 aa14.27□□□□□ -0.13
SQSTM1-201ENST00000360718 TRIM58Q8NG06 486 aa14.27□□□□□ -0.13
SQSTM1-201ENST00000360718 TMEM174Q8WUU8 243 aa14.27□□□□□ -0.13
SQSTM1-201ENST00000360718 MMS19Q96T76 1030 aa14.27□□□□□ -0.13
SQSTM1-201ENST00000360718 SUCLA2Q9P2R7 463 aaPredicted RBP14.27□□□□□ -0.13
SQSTM1-201ENST00000360718 HNRNPDLO14979 420 aaKnown RBP14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 ASAP2O43150 1006 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 ADCY3O60266 1144 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 TACC1O75410 805 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 TMOD1P28289 359 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 EFNA5P52803 228 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 LAMTOR4Q0VGL1 99 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 TFDP1Q14186 410 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 GRIK4Q16099 956 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 KIAA0753Q2KHM9 967 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 TCERG1LQ5VWI1 586 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 CCDC155Q8N6L0 562 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 XXYLT1Q8NBI6 393 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 BORCS6Q96GS4 357 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 PCIF1Q9H4Z3 704 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 SETD4Q9NVD3 440 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 HDAC6Q9UBN7 1215 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 PLAGL2Q9UPG8 496 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 TTLL13PA6NNM8 815 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 SEPT4O43236 478 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 MYL3P08590 195 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 C6orf222P0C671 652 aaPredicted RBP14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 ACTN2P35609 894 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 KLK7P49862 253 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 LIG4P49917 911 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 PPFIA1Q13136 1202 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 DCAF17Q5H9S7 520 aaPredicted RBP14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 ZBTB8OSQ8IWT0 167 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 KCNN1Q92952 543 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 TSPYL1Q9H0U9 437 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 C2orf40Q9H1Z8 148 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 TMEM134Q9H6X4 195 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 JRKLQ9Y4A0 524 aa14.26□□□□□ -0.13
SQSTM1-201ENST00000360718 HAS3O00219 553 aa14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 FKTNO75072 461 aa14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 AFPP02771 609 aaKnown RBP14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 SRGAP2CP0DJJ0 459 aa14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 KRT13P13646 458 aa14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 PRLRP16471 622 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms