RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 C16orf45Q96MC5 204 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC4-201ENST00000359005 TOX2Q96NM4 488 aa11.69□□□□□ -0.54
TRAPPC4-201ENST00000359005 TUBB2BQ9BVA1 445 aa11.69□□□□□ -0.54
TRAPPC4-201ENST00000359005 LSM14BQ9BX40 385 aaKnown RBP11.69□□□□□ -0.54
TRAPPC4-201ENST00000359005 TTYH3Q9C0H2 523 aa11.69□□□□□ -0.54
TRAPPC4-201ENST00000359005 HSPBP1Q9NZL4 362 aa11.69□□□□□ -0.54
TRAPPC4-201ENST00000359005 ARHGAP28Q9P2N2 729 aa11.69□□□□□ -0.54
TRAPPC4-201ENST00000359005 Q9Y3F1 56 aa11.69□□□□□ -0.54
TRAPPC4-201ENST00000359005 EPN1Q9Y6I3 576 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC4-201ENST00000359005 EYSQ5T1H1 3165 aa11.69□□□□□ -0.54
TRAPPC4-201ENST00000359005 WDR81Q562E7 1941 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 UMODL1Q5DID0 1318 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 SSU72P8A0A1W2PR75 194 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 RRN3P2A6NIE6 340 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 ZNF233A6NK53 670 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 KRT86O43790 486 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 SORBS3O60504 671 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 SERPING1P05155 500 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 FMO5P49326 533 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 VAMP7P51809 220 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 AP3M2P53677 418 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 POU5F1BQ06416 359 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 PLCB4Q15147 1175 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 SURF1Q15526 300 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 KYAT1Q16773 422 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 HSDL1Q3SXM5 330 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 C10orf76Q5T2E6 689 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 ZPBP2Q6X784 338 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 RRAGAQ7L523 313 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 FAM126BQ8IXS8 530 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 GPD1LQ8N335 351 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 PCSK9Q8NBP7 692 aaKnown RBP11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 OR6J1Q8NGC5 347 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 TMC2Q8TDI7 906 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 SLC35C1Q96A29 364 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 GLT1D1Q96MS3 346 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 AP5M1Q9H0R1 490 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 TRPV6Q9H1D0 765 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 GPRC5CQ9NQ84 441 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 TRMT1Q9NXH9 659 aaKnown RBP11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 GCNT4Q9P109 453 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 PRKAG2Q9UGJ0 569 aa11.68□□□□□ -0.54
TRAPPC4-201ENST00000359005 EIF3CLB5ME19 914 aaKnown RBP11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 AKR1B10O60218 316 aa11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 KPNA6O60684 536 aa11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 NDUFA10O95299 355 aa11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 CD4P01730 458 aa11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 PIGRP01833 764 aa11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 FERP16591 822 aa11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 ATP4AP20648 1035 aa11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 MATR3P43243 847 aaKnown RBP eCLIP11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 PHKA2P46019 1235 aa11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 CPT1AP50416 773 aa11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 ETF1P62495 437 aaKnown RBP11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 MYL7Q01449 175 aa11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 ARHGAP1Q07960 439 aa11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 NCBP1Q09161 790 aaKnown RBP11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 KCNA1Q09470 495 aa11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 SNRNP35Q16560 246 aaKnown RBP11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 MAPK6Q16659 721 aa11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 FAM109BQ6ICB4 259 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 PDXDC1Q6P996 788 aa11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 NYAP1Q6ZVC0 841 aa11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 KIAA1328Q86T90 577 aa11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 DEFB123Q8N688 67 aa11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 MAP7D2Q96T17 732 aa11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 EIF3CQ99613 913 aaKnown RBP11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 KATNAL1Q9BW62 490 aa11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 MRPL4Q9BYD3 311 aaKnown RBP11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 HAUS4Q9H6D7 363 aa11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 NHEJ1Q9H9Q4 299 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 SPC25Q9HBM1 224 aa11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 POLD4Q9HCU8 107 aa11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 XPNPEP1Q9NQW7 623 aa11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 MTMR10Q9NXD2 777 aa11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 ADGRG1Q9Y653 693 aa11.67□□□□□ -0.54
TRAPPC4-201ENST00000359005 PRUNE2Q8WUY3 3088 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 FRMPD3Q5JV73 1810 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 IGKV6-21A0A0C4DH24 114 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 A0A0U1RQG5 324 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 TMEM150BA6NC51 233 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 SOWAHDA6NJG2 315 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 DCDC2CA8MYV0 355 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 EXTL3O43909 919 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 GFPT2O94808 682 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 TIMP1P01033 207 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 LGALS2P05162 132 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 ACRP10323 421 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 RAG1P15918 1043 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 CYP2C18P33260 490 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 STAT1P42224 750 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 MCCD1P59942 119 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 POLR2FP61218 127 aaKnown RBP11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 KIF5AQ12840 1032 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 ITGA7Q13683 1181 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 PCBP1Q15365 356 aaKnown RBP eCLIP11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 ASIC2Q16515 512 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 PTPN21Q16825 1174 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 KLHDC7AQ5VTJ3 777 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 KRT39Q6A163 491 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms