RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 NLRP11P59045 1033 aaKnown RBP13.7□□□□□ -0.22
GGPS1-202ENST00000358966 KRT83P78385 493 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 CCNA1P78396 465 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 PLCB4Q15147 1175 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 MAMDC4Q6UXC1 1216 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 METTL13Q8N6R0 699 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 LMO3Q8TAP4 145 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 DEPTORQ8TB45 409 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 AFG1LQ8WV93 481 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 SPIRE2Q8WWL2 714 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 SEMA4DQ92854 862 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 PI4K2AQ9BTU6 479 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 TMEM117Q9H0C3 514 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.7□□□□□ -0.22
GGPS1-202ENST00000358966 PSD3Q9NYI0 1048 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 DNAJC12Q9UKB3 198 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 MRFAP1Q9Y605 127 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 LRRIQ3A6PVS8 624 aaPredicted RBP13.69□□□□□ -0.22
GGPS1-202ENST00000358966 CPP00450 1065 aa13.69□□□□□ -0.22
GGPS1-202ENST00000358966 SERPING1P05155 500 aa13.69□□□□□ -0.22
GGPS1-202ENST00000358966 LIG4P49917 911 aa13.69□□□□□ -0.22
GGPS1-202ENST00000358966 DNA2P51530 1060 aa13.69□□□□□ -0.22
GGPS1-202ENST00000358966 CDK17Q00537 523 aa13.69□□□□□ -0.22
GGPS1-202ENST00000358966 ARHGAP1Q07960 439 aa13.69□□□□□ -0.22
GGPS1-202ENST00000358966 ALCAMQ13740 583 aa13.69□□□□□ -0.22
GGPS1-202ENST00000358966 TTLL4Q14679 1199 aa13.69□□□□□ -0.22
GGPS1-202ENST00000358966 DRAP1Q14919 205 aaPredicted RBP13.69□□□□□ -0.22
GGPS1-202ENST00000358966 ZC3H12AQ5D1E8 599 aaKnown RBP13.69□□□□□ -0.22
GGPS1-202ENST00000358966 FAM160B1Q5W0V3 765 aa13.69□□□□□ -0.22
GGPS1-202ENST00000358966 ANKRD23Q86SG2 305 aa13.69□□□□□ -0.22
GGPS1-202ENST00000358966 TMEM130Q8N3G9 435 aa13.69□□□□□ -0.22
GGPS1-202ENST00000358966 NIFKQ9BYG3 293 aaKnown RBP13.69□□□□□ -0.22
GGPS1-202ENST00000358966 GPR88Q9GZN0 384 aa13.69□□□□□ -0.22
GGPS1-202ENST00000358966 GOLPH3Q9H4A6 298 aa13.69□□□□□ -0.22
GGPS1-202ENST00000358966 SLC24A3Q9HC58 644 aa13.69□□□□□ -0.22
GGPS1-202ENST00000358966 PLCB1Q9NQ66 1216 aa13.69□□□□□ -0.22
GGPS1-202ENST00000358966 TMCO5BA8MYB1 307 aa13.69□□□□□ -0.22
GGPS1-202ENST00000358966 ARL2P36404 184 aa13.69□□□□□ -0.22
GGPS1-202ENST00000358966 MATR3P43243 847 aaKnown RBP eCLIP13.69□□□□□ -0.22
GGPS1-202ENST00000358966 MAGEA1P43355 309 aa13.69□□□□□ -0.22
GGPS1-202ENST00000358966 JAM2P57087 298 aa13.69□□□□□ -0.22
GGPS1-202ENST00000358966 INTS8Q75QN2 995 aaKnown RBP13.69□□□□□ -0.22
GGPS1-202ENST00000358966 PALB2Q86YC2 1186 aa13.69□□□□□ -0.22
GGPS1-202ENST00000358966 RHPN2Q8IUC4 686 aa13.69□□□□□ -0.22
GGPS1-202ENST00000358966 SHCBP1Q8NEM2 672 aa13.69□□□□□ -0.22
GGPS1-202ENST00000358966 SCFD2Q8WU76 684 aa13.69□□□□□ -0.22
GGPS1-202ENST00000358966 FAXDC2Q96IV6 333 aa13.69□□□□□ -0.22
GGPS1-202ENST00000358966 NLRP4Q96MN2 994 aa13.69□□□□□ -0.22
GGPS1-202ENST00000358966 PTPRJQ12913 1337 aa13.68□□□□□ -0.22
GGPS1-202ENST00000358966 F8VZ95 297 aa13.68□□□□□ -0.22
GGPS1-202ENST00000358966 K7ERI5 159 aa13.68□□□□□ -0.22
GGPS1-202ENST00000358966 EVI5O60447 810 aa13.68□□□□□ -0.22
GGPS1-202ENST00000358966 SASH3O75995 380 aa13.68□□□□□ -0.22
GGPS1-202ENST00000358966 PPP2R3AQ06190 1150 aa13.68□□□□□ -0.22
GGPS1-202ENST00000358966 KIF5AQ12840 1032 aa13.68□□□□□ -0.22
GGPS1-202ENST00000358966 ZBTB33Q86T24 672 aa13.68□□□□□ -0.22
GGPS1-202ENST00000358966 RNF149Q8NC42 400 aa13.68□□□□□ -0.22
GGPS1-202ENST00000358966 UBE2TQ9NPD8 197 aaPredicted RBP13.68□□□□□ -0.22
GGPS1-202ENST00000358966 ARGLU1Q9NWB6 273 aaPredicted RBP13.68□□□□□ -0.22
GGPS1-202ENST00000358966 AIPL1Q9NZN9 384 aa13.68□□□□□ -0.22
GGPS1-202ENST00000358966 CTAGE9A4FU28 777 aa13.68□□□□□ -0.22
GGPS1-202ENST00000358966 NEBLO76041 1014 aa13.68□□□□□ -0.22
GGPS1-202ENST00000358966 MXI1P50539 228 aa13.68□□□□□ -0.22
GGPS1-202ENST00000358966 TAS1R2Q8TE23 839 aa13.68□□□□□ -0.22
GGPS1-202ENST00000358966 AFAP1L1Q8TED9 768 aa13.68□□□□□ -0.22
GGPS1-202ENST00000358966 PARD3BQ8TEW8 1205 aa13.68□□□□□ -0.22
GGPS1-202ENST00000358966 MAML3Q96JK9 1138 aa13.68□□□□□ -0.22
GGPS1-202ENST00000358966 CAPZA3Q96KX2 299 aa13.68□□□□□ -0.22
GGPS1-202ENST00000358966 PARK7Q99497 189 aaKnown RBP13.68□□□□□ -0.22
GGPS1-202ENST00000358966 MPHOSPH6Q99547 160 aaKnown RBP13.68□□□□□ -0.22
GGPS1-202ENST00000358966 NRBP2Q9NSY0 501 aa13.68□□□□□ -0.22
GGPS1-202ENST00000358966 APEX2Q9UBZ4 518 aa13.68□□□□□ -0.22
GGPS1-202ENST00000358966 ASB14A6NK59 587 aa13.67□□□□□ -0.22
GGPS1-202ENST00000358966 FOXN3O00409 490 aaPredicted RBP13.67□□□□□ -0.22
GGPS1-202ENST00000358966 ZNF185O15231 689 aa13.67□□□□□ -0.22
GGPS1-202ENST00000358966 NCK2O43639 380 aa13.67□□□□□ -0.22
GGPS1-202ENST00000358966 KRT86O43790 486 aa13.67□□□□□ -0.22
GGPS1-202ENST00000358966 COPB2P35606 906 aa13.67□□□□□ -0.22
GGPS1-202ENST00000358966 USP8P40818 1118 aa13.67□□□□□ -0.22
GGPS1-202ENST00000358966 CCL14Q16627 93 aa13.67□□□□□ -0.22
GGPS1-202ENST00000358966 RASAL3Q86YV0 1011 aa13.67□□□□□ -0.22
GGPS1-202ENST00000358966 IQCDQ96DY2 449 aa13.67□□□□□ -0.22
GGPS1-202ENST00000358966 KATNBL1Q9H079 304 aa13.67□□□□□ -0.22
GGPS1-202ENST00000358966 PDE11AQ9HCR9 933 aa13.67□□□□□ -0.22
GGPS1-202ENST00000358966 EXOC7Q9UPT5 735 aa13.67□□□□□ -0.22
GGPS1-202ENST00000358966 B4GALT5O43286 388 aa13.67□□□□□ -0.22
GGPS1-202ENST00000358966 MAFO75444 373 aaPredicted RBP13.67□□□□□ -0.22
GGPS1-202ENST00000358966 ZBTB48P10074 688 aaPredicted RBP13.67□□□□□ -0.22
GGPS1-202ENST00000358966 KLRC1P26715 233 aa13.67□□□□□ -0.22
GGPS1-202ENST00000358966 TNFSF9P41273 254 aa13.67□□□□□ -0.22
GGPS1-202ENST00000358966 NAP1L1P55209 391 aaKnown RBP13.67□□□□□ -0.22
GGPS1-202ENST00000358966 FKBP1BP68106 108 aa13.67□□□□□ -0.22
GGPS1-202ENST00000358966 C12orf56Q8IXR9 622 aa13.67□□□□□ -0.22
GGPS1-202ENST00000358966 MORC4Q8TE76 937 aa13.67□□□□□ -0.22
GGPS1-202ENST00000358966 ATP8B4Q8TF62 1192 aa13.67□□□□□ -0.22
GGPS1-202ENST00000358966 MIEF2Q96C03 454 aa13.67□□□□□ -0.22
GGPS1-202ENST00000358966 NAPGQ99747 312 aaPredicted RBP13.67□□□□□ -0.22
GGPS1-202ENST00000358966 EDEM3Q9BZQ6 932 aa13.67□□□□□ -0.22
GGPS1-202ENST00000358966 C17orf75Q9HAS0 396 aa13.67□□□□□ -0.22
GGPS1-202ENST00000358966 FLRT1Q9NZU1 646 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms