RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 C1QTNF2Q9BXJ5 285 aa4.31□□□□□ -1.72
CNGA1-201ENST00000358519 CFHR5Q9BXR6 569 aa4.31□□□□□ -1.72
CNGA1-201ENST00000358519 VPS16Q9H269 839 aa4.31□□□□□ -1.72
CNGA1-201ENST00000358519 ARMT1Q9H993 441 aa4.31□□□□□ -1.72
CNGA1-201ENST00000358519 AS3MTQ9HBK9 375 aa4.31□□□□□ -1.72
CNGA1-201ENST00000358519 GDF3Q9NR23 364 aa4.31□□□□□ -1.72
CNGA1-201ENST00000358519 RBM12Q9NTZ6 932 aaKnown RBP4.31□□□□□ -1.72
CNGA1-201ENST00000358519 EHD2Q9NZN4 543 aa4.31□□□□□ -1.72
CNGA1-201ENST00000358519 ADAM22Q9P0K1 906 aa4.31□□□□□ -1.72
CNGA1-201ENST00000358519 ZSWIM5Q9P217 1185 aa4.31□□□□□ -1.72
CNGA1-201ENST00000358519 SERTAD1Q9UHV2 236 aa4.31□□□□□ -1.72
CNGA1-201ENST00000358519 SERPINB13Q9UIV8 391 aa4.31□□□□□ -1.72
CNGA1-201ENST00000358519 STK38LQ9Y2H1 464 aa4.31□□□□□ -1.72
CNGA1-201ENST00000358519 STXBP5LQ9Y2K9 1186 aa4.31□□□□□ -1.72
CNGA1-201ENST00000358519 PHIPQ8WWQ0 1821 aa4.31□□□□□ -1.72
CNGA1-201ENST00000358519 TRIOBPQ9H2D6 2365 aa4.31□□□□□ -1.72
CNGA1-201ENST00000358519 SYNRGQ9UMZ2 1314 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 GOLGA6L10A0A0M3HER8 536 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 TTC26A0AVF1 554 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 IGF2BP3O00425 579 aaKnown RBP eCLIP4.3□□□□□ -1.72
CNGA1-201ENST00000358519 KRT16P08779 473 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 TSPY3P0CV98 308 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 TSPY8P0CW00 308 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 PRLRP16471 622 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 SP100P23497 879 aaPredicted RBP4.3□□□□□ -1.72
CNGA1-201ENST00000358519 RFC5P40937 340 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 PSMC4P43686 418 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 MAP2K3P46734 347 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 TM4SF4P48230 202 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 USP11P51784 963 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 DEUP1Q05D60 604 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 CXCL9Q07325 125 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 KLC1Q07866 573 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 BIRC3Q13489 604 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 AGERQ15109 404 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 KRT31Q15323 416 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 RSPO4Q2I0M5 234 aaPredicted RBP4.3□□□□□ -1.72
CNGA1-201ENST00000358519 Q4G0T1 1027 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 SFMBT2Q5VUG0 894 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 NFRKBQ6P4R8 1299 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 WDR59Q6PJI9 974 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 TRPM8Q7Z2W7 1104 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 APBB1IPQ7Z5R6 666 aaPredicted RBP4.3□□□□□ -1.72
CNGA1-201ENST00000358519 NOSTRINQ8IVI9 506 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 SMCR8Q8TEV9 937 aaPredicted RBP4.3□□□□□ -1.72
CNGA1-201ENST00000358519 TMEM174Q8WUU8 243 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 ARMC5Q96C12 935 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 ZMYND12Q9H0C1 365 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 CABP5Q9NP86 173 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 PLCB1Q9NQ66 1216 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 DLGAP2Q9P1A6 1054 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 ATXN10Q9UBB4 475 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 POLLQ9UGP5 575 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 PCDHA4Q9UN74 947 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 DAGLAQ9Y4D2 1042 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 MYH10P35580 1976 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 ATP8B3O60423 1300 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 KDM3AQ9Y4C1 1321 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 TSPY2A6NKD2 308 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 DCDC2CA8MYV0 355 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 ASAP2O43150 1006 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 PAX4O43316 350 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 ECE2O60344 883 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 HIP1RO75146 1068 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 ZNF189O75820 626 aaPredicted RBP4.3□□□□□ -1.72
CNGA1-201ENST00000358519 FLOT1O75955 427 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 HEXIM1O94992 359 aaKnown RBP4.3□□□□□ -1.72
CNGA1-201ENST00000358519 RARAP10276 462 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 SCG2P13521 617 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 ZNF24P17028 368 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 ATP6V1C1P21283 382 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 PAX3P23760 479 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 CTHP32929 405 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 PAFAH1B1P43034 410 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 MSH2P43246 934 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 GATA4P43694 442 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 CRKP46108 304 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 NCALDP61601 193 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 SNRPFP62306 86 aaKnown RBP4.3□□□□□ -1.72
CNGA1-201ENST00000358519 ATP11AP98196 1134 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 CUL4BQ13620 913 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 ITIH4Q14624 930 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 TRADDQ15628 312 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 KIAA0753Q2KHM9 967 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 ERMARDQ5T6L9 678 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 FOXB2Q5VYV0 432 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 OR52E8Q6IFG1 317 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 LRIG3Q6UXM1 1119 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 LINC00114Q6XXX2 140 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 PIGWQ7Z7B1 504 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 LCA5Q86VQ0 697 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 LONP2Q86WA8 852 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 FAM114A1Q8IWE2 563 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 SMYD4Q8IYR2 804 aaPredicted RBP4.3□□□□□ -1.72
CNGA1-201ENST00000358519 KIF2BQ8N4N8 673 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 OGFOD1Q8N543 542 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 ARL10Q8N8L6 244 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 PHC3Q8NDX5 983 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 SPATA20Q8TB22 786 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 MDM1Q8TC05 714 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms