RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 LINC01599Q8WXQ3 324 aa16.66■□□□□ 0.26
TPM1-206ENST00000358278 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.66■□□□□ 0.268e-7■■■□□ 15.2
TPM1-206ENST00000358278 PTPRHQ9HD43 1115 aa16.66■□□□□ 0.26
TPM1-206ENST00000358278 AGPAT3Q9NRZ7 376 aa16.66■□□□□ 0.26
TPM1-206ENST00000358278 GBF1Q92538 1859 aa16.66■□□□□ 0.26
TPM1-206ENST00000358278 ZBBXA8MT70 800 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 CLIC2O15247 247 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 MCF2P10911 925 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 SKIP12755 728 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 CCNE1P24864 410 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 KCNJ6P48051 423 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 MCL1Q07820 350 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 C16orf59Q7L2K0 433 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 NOC3LQ8WTT2 800 aaKnown RBP16.65■□□□□ 0.26
TPM1-206ENST00000358278 P2RX5Q93086 422 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 CBWD1Q9BRT8 395 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 SEMA6BQ9H3T3 888 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 PCIF1Q9H4Z3 704 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 AGO2Q9UKV8 859 aaKnown RBP16.65■□□□□ 0.26
TPM1-206ENST00000358278 PCDHB2Q9Y5E7 798 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 A0A0B4J269 797 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 A0A0U1RQF3 1178 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 BICDL2A1A5D9 508 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 TRIM49BA6NDI0 452 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 ABLIM1O14639 778 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 GARTP22102 1010 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 ADSSP30520 456 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 LRRC63Q05C16 580 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 TMEM240Q5SV17 173 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 UBXN11Q5T124 520 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 CENPPQ6IPU0 288 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 RTN4RL1Q86UN2 441 aaPredicted RBP16.65■□□□□ 0.26
TPM1-206ENST00000358278 THNSL1Q8IYQ7 743 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 HACE1Q8IYU2 909 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 RNF169Q8NCN4 708 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 TRAIPQ9BWF2 469 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 HAPLN2Q9GZV7 340 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 MTIF3Q9H2K0 278 aaKnown RBP16.65■□□□□ 0.26
TPM1-206ENST00000358278 TRAF3IP3Q9Y228 551 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 IPPQ9Y573 584 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 STYXL1Q9Y6J8 313 aa16.65■□□□□ 0.26
TPM1-206ENST00000358278 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.64■□□□□ 0.25
TPM1-206ENST00000358278 C9IYK1 514 aa16.64■□□□□ 0.25
TPM1-206ENST00000358278 ENPP3O14638 875 aa16.64■□□□□ 0.25
TPM1-206ENST00000358278 OGTO15294 1046 aa16.64■□□□□ 0.25
TPM1-206ENST00000358278 NR3C1P04150 777 aa16.64■□□□□ 0.25
TPM1-206ENST00000358278 CYP2J2P51589 502 aa16.64■□□□□ 0.25
TPM1-206ENST00000358278 STX17P56962 302 aa16.64■□□□□ 0.25
TPM1-206ENST00000358278 OSTNP61366 133 aa16.64■□□□□ 0.25
TPM1-206ENST00000358278 ZCWPW2Q504Y3 356 aa16.64■□□□□ 0.25
TPM1-206ENST00000358278 APOL6Q9BWW8 343 aa16.64■□□□□ 0.25
TPM1-206ENST00000358278 DNAJC25Q9H1X3 360 aa16.64■□□□□ 0.25
TPM1-206ENST00000358278 NXF3Q9H4D5 531 aaKnown RBP16.64■□□□□ 0.25
TPM1-206ENST00000358278 HSPBP1Q9NZL4 362 aa16.64■□□□□ 0.25
TPM1-206ENST00000358278 KIAA0391O15091 583 aaKnown RBP16.63■□□□□ 0.25
TPM1-206ENST00000358278 AMHP03971 560 aa16.63■□□□□ 0.25
TPM1-206ENST00000358278 PMS1P54277 932 aaKnown RBP16.63■□□□□ 0.25
TPM1-206ENST00000358278 WDR5P61964 334 aaKnown RBP16.63■□□□□ 0.25
TPM1-206ENST00000358278 EDRF1Q3B7T1 1238 aa16.63■□□□□ 0.25
TPM1-206ENST00000358278 ANO6Q4KMQ2 910 aa16.63■□□□□ 0.25
TPM1-206ENST00000358278 ANKRD40Q6AI12 368 aa16.63■□□□□ 0.25
TPM1-206ENST00000358278 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.63■□□□□ 0.25
TPM1-206ENST00000358278 C11orf57Q6ZUT1 292 aaPredicted RBP16.63■□□□□ 0.25
TPM1-206ENST00000358278 ECHDC2Q86YB7 292 aa16.63■□□□□ 0.25
TPM1-206ENST00000358278 SAAL1Q96ER3 474 aa16.63■□□□□ 0.25
TPM1-206ENST00000358278 CCDC94Q9BW85 323 aaPredicted RBP16.63■□□□□ 0.25
TPM1-206ENST00000358278 UBE2OQ9C0C9 1292 aaKnown RBP16.63■□□□□ 0.25
TPM1-206ENST00000358278 RNF216Q9NWF9 866 aaPredicted RBP16.63■□□□□ 0.25
TPM1-206ENST00000358278 RWDD2AQ9UIY3 292 aa16.63■□□□□ 0.25
TPM1-206ENST00000358278 LRFN2Q9ULH4 789 aa16.63■□□□□ 0.25
TPM1-206ENST00000358278 HES2Q9Y543 173 aa16.63■□□□□ 0.25
TPM1-206ENST00000358278 LAMA3Q16787 3333 aa16.63■□□□□ 0.25
TPM1-206ENST00000358278 LDHAP00338 332 aaKnown RBP16.62■□□□□ 0.25
TPM1-206ENST00000358278 NR2F2P24468 414 aa16.62■□□□□ 0.25
TPM1-206ENST00000358278 RPL13P26373 211 aaKnown RBP16.62■□□□□ 0.25
TPM1-206ENST00000358278 SEZ6Q53EL9 994 aa16.62■□□□□ 0.25
TPM1-206ENST00000358278 C12orf56Q8IXR9 622 aa16.62■□□□□ 0.25
TPM1-206ENST00000358278 CEP120Q8N960 986 aa16.62■□□□□ 0.25
TPM1-206ENST00000358278 SMG8Q8ND04 991 aaKnown RBP16.62■□□□□ 0.25
TPM1-206ENST00000358278 HERVK_113Q902F9 699 aa16.62■□□□□ 0.25
TPM1-206ENST00000358278 PGBD4Q96DM1 585 aa16.62■□□□□ 0.25
TPM1-206ENST00000358278 FAM213AQ9BRX8 229 aa16.62■□□□□ 0.25
TPM1-206ENST00000358278 FUCA2Q9BTY2 467 aa16.62■□□□□ 0.25
TPM1-206ENST00000358278 NAT10Q9H0A0 1025 aaKnown RBP16.62■□□□□ 0.25
TPM1-206ENST00000358278 PCDHB7Q9Y5E2 793 aa16.62■□□□□ 0.25
TPM1-206ENST00000358278 EXOC3O60645 756 aa16.62■□□□□ 0.25
TPM1-206ENST00000358278 ZNF623O75123 536 aa16.62■□□□□ 0.25
TPM1-206ENST00000358278 ITGA4P13612 1032 aa16.62■□□□□ 0.25
TPM1-206ENST00000358278 ERCC5P28715 1186 aaPredicted RBP16.62■□□□□ 0.25
TPM1-206ENST00000358278 GRM5P41594 1212 aa16.62■□□□□ 0.25
TPM1-206ENST00000358278 ACOT2P49753 483 aa16.62■□□□□ 0.25
TPM1-206ENST00000358278 HSP90AA2PQ14568 343 aaPredicted RBP16.62■□□□□ 0.25
TPM1-206ENST00000358278 KYAT1Q16773 422 aa16.62■□□□□ 0.25
TPM1-206ENST00000358278 CT47A1Q5JQC4 288 aaPredicted RBP16.62■□□□□ 0.25
TPM1-206ENST00000358278 GPD1LQ8N335 351 aa16.62■□□□□ 0.25
TPM1-206ENST00000358278 XXYLT1Q8NBI6 393 aa16.62■□□□□ 0.25
TPM1-206ENST00000358278 GDF15Q99988 308 aa16.62■□□□□ 0.25
TPM1-206ENST00000358278 TMEM161AQ9NX61 479 aa16.62■□□□□ 0.25
TPM1-206ENST00000358278 SNTG2Q9NY99 539 aa16.62■□□□□ 0.25
TPM1-206ENST00000358278 PARP2Q9UGN5 583 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms