RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 FOXP1Q9H334 677 aaPredicted RBP11.81□□□□□ -0.52
CAPN3-204ENST00000356316 PRMT7Q9NVM4 692 aaPredicted RBP11.81□□□□□ -0.52
CAPN3-204ENST00000356316 PARP2Q9UGN5 583 aa11.81□□□□□ -0.52
CAPN3-204ENST00000356316 LIMD1Q9UGP4 676 aa11.81□□□□□ -0.52
CAPN3-204ENST00000356316 NOL7Q9UMY1 257 aaKnown RBP11.81□□□□□ -0.52
CAPN3-204ENST00000356316 USTQ9Y2C2 406 aa11.81□□□□□ -0.52
CAPN3-204ENST00000356316 HES2Q9Y543 173 aa11.81□□□□□ -0.52
CAPN3-204ENST00000356316 A0A1B0GUA9 196 aa11.8□□□□□ -0.52
CAPN3-204ENST00000356316 ARHGEF35A5YM69 484 aa11.8□□□□□ -0.52
CAPN3-204ENST00000356316 C2CD4DB7Z1M9 353 aa11.8□□□□□ -0.52
CAPN3-204ENST00000356316 NPTXRO95502 500 aa11.8□□□□□ -0.52
CAPN3-204ENST00000356316 OR52Z1P0C646 297 aa11.8□□□□□ -0.52
CAPN3-204ENST00000356316 AKAP5P24588 427 aa11.8□□□□□ -0.52
CAPN3-204ENST00000356316 GLUD2P49448 558 aa11.8□□□□□ -0.52
CAPN3-204ENST00000356316 SCNN1GP51170 649 aa11.8□□□□□ -0.52
CAPN3-204ENST00000356316 CLCN4P51793 760 aa11.8□□□□□ -0.52
CAPN3-204ENST00000356316 PTPN5P54829 565 aa11.8□□□□□ -0.52
CAPN3-204ENST00000356316 HMGN5P82970 282 aaKnown RBP11.8□□□□□ -0.52
CAPN3-204ENST00000356316 ORC2Q13416 577 aaPredicted RBP11.8□□□□□ -0.52
CAPN3-204ENST00000356316 ZNF174Q15697 407 aa11.8□□□□□ -0.52
CAPN3-204ENST00000356316 KANK3Q6NY19 840 aa11.8□□□□□ -0.52
CAPN3-204ENST00000356316 OTOP3Q7RTS5 596 aa11.8□□□□□ -0.52
CAPN3-204ENST00000356316 ZDHHC14Q8IZN3 488 aa11.8□□□□□ -0.52
CAPN3-204ENST00000356316 PRIMPOLQ96LW4 560 aa11.8□□□□□ -0.52
CAPN3-204ENST00000356316 ZFP42Q96MM3 310 aa11.8□□□□□ -0.52
CAPN3-204ENST00000356316 RPS6KC1Q96S38 1066 aa11.8□□□□□ -0.52
CAPN3-204ENST00000356316 POLR3CQ9BUI4 534 aaPredicted RBP11.8□□□□□ -0.52
CAPN3-204ENST00000356316 VN1R3Q9BXE9 311 aa11.8□□□□□ -0.52
CAPN3-204ENST00000356316 IRF2BPLQ9H1B7 796 aa11.8□□□□□ -0.52
CAPN3-204ENST00000356316 C2orf40Q9H1Z8 148 aa11.8□□□□□ -0.52
CAPN3-204ENST00000356316 TMEM60Q9H2L4 133 aa11.8□□□□□ -0.52
CAPN3-204ENST00000356316 CDH22Q9UJ99 828 aa11.8□□□□□ -0.52
CAPN3-204ENST00000356316 WNT7AO00755 349 aa11.79□□□□□ -0.52
CAPN3-204ENST00000356316 B4GALT5O43286 388 aa11.79□□□□□ -0.52
CAPN3-204ENST00000356316 B4GALT3O60512 393 aa11.79□□□□□ -0.52
CAPN3-204ENST00000356316 LILRB3O75022 631 aa11.79□□□□□ -0.52
CAPN3-204ENST00000356316 TADA2AO75478 443 aa11.79□□□□□ -0.52
CAPN3-204ENST00000356316 SEC24BO95487 1268 aa11.79□□□□□ -0.52
CAPN3-204ENST00000356316 SPATA31C1P0DKV0 1188 aa11.79□□□□□ -0.52
CAPN3-204ENST00000356316 RPA1P27694 616 aa11.79□□□□□ -0.52
CAPN3-204ENST00000356316 MRE11P49959 708 aa11.79□□□□□ -0.52
CAPN3-204ENST00000356316 PRPF4BQ13523 1007 aaKnown RBP11.79□□□□□ -0.52
CAPN3-204ENST00000356316 PPP2R5AQ15172 486 aa11.79□□□□□ -0.52
CAPN3-204ENST00000356316 MAPK6Q16659 721 aa11.79□□□□□ -0.52
CAPN3-204ENST00000356316 USP41Q3LFD5 358 aa11.79□□□□□ -0.52
CAPN3-204ENST00000356316 IER5LQ5T953 404 aa11.79□□□□□ -0.52
CAPN3-204ENST00000356316 HAUS3Q68CZ6 603 aa11.79□□□□□ -0.52
CAPN3-204ENST00000356316 PADI6Q6TGC4 694 aa11.79□□□□□ -0.52
CAPN3-204ENST00000356316 C15orf39Q6ZRI6 1047 aa11.79□□□□□ -0.52
CAPN3-204ENST00000356316 CCDC149Q6ZUS6 474 aa11.79□□□□□ -0.52
CAPN3-204ENST00000356316 GPR149Q86SP6 731 aa11.79□□□□□ -0.52
CAPN3-204ENST00000356316 DEPTORQ8TB45 409 aa11.79□□□□□ -0.52
CAPN3-204ENST00000356316 ASIC4Q96FT7 647 aa11.79□□□□□ -0.52
CAPN3-204ENST00000356316 IFT74Q96LB3 600 aa11.79□□□□□ -0.52
CAPN3-204ENST00000356316 ADPGKQ9BRR6 497 aa11.79□□□□□ -0.52
CAPN3-204ENST00000356316 HERC2P3Q9BVR0 1158 aa11.79□□□□□ -0.52
CAPN3-204ENST00000356316 RAB34Q9BZG1 259 aa11.79□□□□□ -0.52
CAPN3-204ENST00000356316 MFSD1Q9H3U5 465 aa11.79□□□□□ -0.52
CAPN3-204ENST00000356316 NXF3Q9H4D5 531 aaKnown RBP11.79□□□□□ -0.52
CAPN3-204ENST00000356316 GPRC5CQ9NQ84 441 aa11.79□□□□□ -0.52
CAPN3-204ENST00000356316 SH2B1Q9NRF2 756 aaPredicted RBP11.79□□□□□ -0.52
CAPN3-204ENST00000356316 MIOSQ9NXC5 875 aa11.79□□□□□ -0.52
CAPN3-204ENST00000356316 KLK14Q9P0G3 267 aa11.79□□□□□ -0.52
CAPN3-204ENST00000356316 STK24Q9Y6E0 443 aa11.79□□□□□ -0.52
CAPN3-204ENST00000356316 CCDC195A0A1B0GUA6 201 aa11.78□□□□□ -0.52
CAPN3-204ENST00000356316 N4BP3O15049 544 aa11.78□□□□□ -0.52
CAPN3-204ENST00000356316 INPPL1O15357 1258 aa11.78□□□□□ -0.52
CAPN3-204ENST00000356316 TEX28O15482 410 aa11.78□□□□□ -0.52
CAPN3-204ENST00000356316 MED24O75448 989 aa11.78□□□□□ -0.52
CAPN3-204ENST00000356316 GLUD1P00367 558 aa11.78□□□□□ -0.52
CAPN3-204ENST00000356316 LIG1P18858 919 aa11.78□□□□□ -0.52
CAPN3-204ENST00000356316 MUTP22033 750 aa11.78□□□□□ -0.52
CAPN3-204ENST00000356316 AVPR2P30518 371 aa11.78□□□□□ -0.52
CAPN3-204ENST00000356316 TRAPPC10P48553 1259 aa11.78□□□□□ -0.52
CAPN3-204ENST00000356316 CREMQ03060 361 aa11.78□□□□□ -0.52
CAPN3-204ENST00000356316 DSC1Q08554 894 aa11.78□□□□□ -0.52
CAPN3-204ENST00000356316 GRIK3Q13003 919 aa11.78□□□□□ -0.52
CAPN3-204ENST00000356316 AMHR2Q16671 573 aa11.78□□□□□ -0.52
CAPN3-204ENST00000356316 TTC38Q5R3I4 469 aa11.78□□□□□ -0.52
CAPN3-204ENST00000356316 KIAA0319Q5VV43 1072 aa11.78□□□□□ -0.52
CAPN3-204ENST00000356316 CYP26C1Q6V0L0 522 aa11.78□□□□□ -0.52
CAPN3-204ENST00000356316 TAS1R1Q7RTX1 841 aa11.78□□□□□ -0.52
CAPN3-204ENST00000356316 APBB1IPQ7Z5R6 666 aaPredicted RBP11.78□□□□□ -0.52
CAPN3-204ENST00000356316 CDR2LQ86X02 465 aaPredicted RBP11.78□□□□□ -0.52
CAPN3-204ENST00000356316 FBXO18Q8NFZ0 1043 aa11.78□□□□□ -0.52
CAPN3-204ENST00000356316 STAMQ92783 540 aa11.78□□□□□ -0.52
CAPN3-204ENST00000356316 DCBLD2Q96PD2 775 aa11.78□□□□□ -0.52
CAPN3-204ENST00000356316 PIDD1Q9HB75 910 aa11.78□□□□□ -0.52
CAPN3-204ENST00000356316 MAN1C1Q9NR34 630 aa11.78□□□□□ -0.52
CAPN3-204ENST00000356316 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.78□□□□□ -0.52
CAPN3-204ENST00000356316 MARCH5Q9NX47 278 aa11.78□□□□□ -0.52
CAPN3-204ENST00000356316 DAXXQ9UER7 740 aaPredicted RBP11.78□□□□□ -0.52
CAPN3-204ENST00000356316 MYO10Q9HD67 2058 aa11.78□□□□□ -0.52
CAPN3-204ENST00000356316 TECTAO75443 2155 aa11.78□□□□□ -0.52
CAPN3-204ENST00000356316 BRD1O95696 1058 aa11.77□□□□□ -0.53
CAPN3-204ENST00000356316 ASGR2P07307 311 aa11.77□□□□□ -0.53
CAPN3-204ENST00000356316 CYP11B2P19099 503 aa11.77□□□□□ -0.53
CAPN3-204ENST00000356316 CCT6AP40227 531 aaKnown RBP11.77□□□□□ -0.53
CAPN3-204ENST00000356316 EFNA5P52803 228 aa11.77□□□□□ -0.53
CAPN3-204ENST00000356316 DSG1Q02413 1049 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms