RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 CAV1Q03135 178 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 PPATQ06203 517 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 ASPHQ12797 758 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 MPP2Q14168 576 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 DDB1Q16531 1140 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 PDK4Q16654 411 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 TRMT5Q32P41 509 aaKnown RBP8.22□□□□□ -1.09
CCR9-201ENST00000355983 SOGA3Q5TF21 947 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 TMCO4Q5TGY1 634 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 ALKBH5Q6P6C2 394 aaKnown RBP8.22□□□□□ -1.09
CCR9-201ENST00000355983 MPRIPQ6WCQ1 1025 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 DSTYKQ6XUX3 929 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 CLNKQ7Z7G1 428 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 VPS36Q86VN1 386 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 CCDC125Q86Z20 511 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 MYOCDQ8IZQ8 938 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 C12orf50Q8NA57 414 aaPredicted RBP8.22□□□□□ -1.09
CCR9-201ENST00000355983 DAGLBQ8NCG7 672 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 DENND1AQ8TEH3 1009 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 ABHD8Q96I13 439 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 ZFRQ96KR1 1074 aaKnown RBP8.22□□□□□ -1.09
CCR9-201ENST00000355983 FNBP1Q96RU3 617 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 LSM14BQ9BX40 385 aaKnown RBP8.22□□□□□ -1.09
CCR9-201ENST00000355983 LRRC27Q9C0I9 530 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 CCDC113Q9H0I3 377 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 EPB41L4AQ9HCS5 686 aaPredicted RBP8.22□□□□□ -1.09
CCR9-201ENST00000355983 EURLQ9NYK6 297 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 SENP1Q9P0U3 644 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 STK17AQ9UEE5 414 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 FADS3Q9Y5Q0 445 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 LAMB1P07942 1786 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 CNTNAP5Q8WYK1 1306 aa8.21□□□□□ -1.09
CCR9-201ENST00000355983 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.21□□□□□ -1.09
CCR9-201ENST00000355983 FAM47DPA6NHR8 397 aa8.21□□□□□ -1.09
CCR9-201ENST00000355983 MIF4GDA9UHW6 222 aaKnown RBP8.21□□□□□ -1.09
CCR9-201ENST00000355983 TPD52L2O43399 206 aaKnown RBP8.21□□□□□ -1.09
CCR9-201ENST00000355983 ZNF862O60290 1169 aa8.21□□□□□ -1.09
CCR9-201ENST00000355983 FKBP6O75344 327 aa8.21□□□□□ -1.09
CCR9-201ENST00000355983 PDE6AP16499 860 aa8.21□□□□□ -1.09
CCR9-201ENST00000355983 GTF2H1P32780 548 aa8.21□□□□□ -1.09
CCR9-201ENST00000355983 GEMIN4P57678 1058 aaKnown RBP8.21□□□□□ -1.09
CCR9-201ENST00000355983 POLR2FP61218 127 aaKnown RBP8.21□□□□□ -1.09
CCR9-201ENST00000355983 CREB5Q02930 508 aa8.21□□□□□ -1.09
CCR9-201ENST00000355983 SCARF1Q14162 830 aa8.21□□□□□ -1.09
CCR9-201ENST00000355983 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.21□□□□□ -1.09
CCR9-201ENST00000355983 DHRS4L2Q6PKH6 230 aa8.21□□□□□ -1.09
CCR9-201ENST00000355983 TRIM59Q8IWR1 403 aa8.21□□□□□ -1.09
CCR9-201ENST00000355983 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.21□□□□□ -1.09
CCR9-201ENST00000355983 NSL1Q96IY1 281 aa8.21□□□□□ -1.09
CCR9-201ENST00000355983 VPS50Q96JG6 964 aa8.21□□□□□ -1.09
CCR9-201ENST00000355983 PRICKLE1Q96MT3 831 aaPredicted RBP8.21□□□□□ -1.09
CCR9-201ENST00000355983 CRAMP1Q96RY5 1269 aa8.21□□□□□ -1.09
CCR9-201ENST00000355983 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.21□□□□□ -1.09
CCR9-201ENST00000355983 NACAP1Q9BZK3 213 aa8.21□□□□□ -1.09
CCR9-201ENST00000355983 SSU72Q9NP77 194 aaKnown RBP8.21□□□□□ -1.09
CCR9-201ENST00000355983 KCNK9Q9NPC2 374 aa8.21□□□□□ -1.09
CCR9-201ENST00000355983 INIPQ9NRY2 104 aa8.21□□□□□ -1.09
CCR9-201ENST00000355983 SMG5Q9UPR3 1016 aaKnown RBP8.21□□□□□ -1.09
CCR9-201ENST00000355983 R3HDM2Q9Y2K5 976 aaKnown RBP8.21□□□□□ -1.09
CCR9-201ENST00000355983 SNX24Q9Y343 169 aa8.21□□□□□ -1.09
CCR9-201ENST00000355983 TELO2Q9Y4R8 837 aa8.21□□□□□ -1.09
CCR9-201ENST00000355983 SLC4A4Q9Y6R1 1079 aa8.21□□□□□ -1.09
CCR9-201ENST00000355983 ARHGAP10A1A4S6 786 aa8.21□□□□□ -1.1
CCR9-201ENST00000355983 AP2B1P63010 937 aa8.21□□□□□ -1.1
CCR9-201ENST00000355983 FKBP3Q00688 224 aaKnown RBP8.21□□□□□ -1.1
CCR9-201ENST00000355983 SF3A3Q12874 501 aaKnown RBP eCLIP8.21□□□□□ -1.1
CCR9-201ENST00000355983 SPARCL1Q14515 664 aa8.21□□□□□ -1.1
CCR9-201ENST00000355983 RFWD3Q6PCD5 774 aa8.21□□□□□ -1.1
CCR9-201ENST00000355983 ZNF790Q6PG37 636 aa8.21□□□□□ -1.1
CCR9-201ENST00000355983 PIK3AP1Q6ZUJ8 805 aa8.21□□□□□ -1.1
CCR9-201ENST00000355983 SYDE1Q6ZW31 735 aaPredicted RBP8.21□□□□□ -1.1
CCR9-201ENST00000355983 TDRPQ86YL5 185 aa8.21□□□□□ -1.1
CCR9-201ENST00000355983 MGARPQ8TDB4 240 aa8.21□□□□□ -1.1
CCR9-201ENST00000355983 TTC25Q96NG3 672 aa8.21□□□□□ -1.1
CCR9-201ENST00000355983 BTBD9Q96Q07 612 aa8.21□□□□□ -1.1
CCR9-201ENST00000355983 RBM38Q9H0Z9 239 aaKnown RBP8.21□□□□□ -1.1
CCR9-201ENST00000355983 PPCSQ9HAB8 311 aa8.21□□□□□ -1.1
CCR9-201ENST00000355983 CROTQ9UKG9 612 aa8.21□□□□□ -1.1
CCR9-201ENST00000355983 DMTF1Q9Y222 760 aa8.21□□□□□ -1.1
CCR9-201ENST00000355983 PCDH11YQ9BZA8 1340 aa8.21□□□□□ -1.1
CCR9-201ENST00000355983 ZNF532Q9HCE3 1301 aa8.21□□□□□ -1.1
CCR9-201ENST00000355983 GLI3P10071 1580 aa8.2□□□□□ -1.1
CCR9-201ENST00000355983 SMIM23A6NLE4 172 aa8.2□□□□□ -1.1
CCR9-201ENST00000355983 M0R2N6 131 aa8.2□□□□□ -1.1
CCR9-201ENST00000355983 MATN2O00339 956 aa8.2□□□□□ -1.1
CCR9-201ENST00000355983 VILLO15195 856 aa8.2□□□□□ -1.1
CCR9-201ENST00000355983 NKRFO15226 690 aaKnown RBP eCLIP8.2□□□□□ -1.1
CCR9-201ENST00000355983 EXOC3O60645 756 aa8.2□□□□□ -1.1
CCR9-201ENST00000355983 RNASEH1O60930 286 aaKnown RBP8.2□□□□□ -1.1
CCR9-201ENST00000355983 TTC4O95801 387 aa8.2□□□□□ -1.1
CCR9-201ENST00000355983 ABHD2P08910 425 aa8.2□□□□□ -1.1
CCR9-201ENST00000355983 TMEM253P0C7T8 217 aa8.2□□□□□ -1.1
CCR9-201ENST00000355983 ZCCHC18P0CG32 403 aa8.2□□□□□ -1.1
CCR9-201ENST00000355983 SCG2P13521 617 aa8.2□□□□□ -1.1
CCR9-201ENST00000355983 UQCRBP14927 111 aa8.2□□□□□ -1.1
CCR9-201ENST00000355983 ANPEPP15144 967 aa8.2□□□□□ -1.1
CCR9-201ENST00000355983 ADORA1P30542 326 aa8.2□□□□□ -1.1
CCR9-201ENST00000355983 HDAC4P56524 1084 aa8.2□□□□□ -1.1
CCR9-201ENST00000355983 STAT4Q14765 748 aa8.2□□□□□ -1.1
CCR9-201ENST00000355983 RASA2Q15283 850 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms