RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 CLDN3O15551 220 aa19.57■□□□□ 0.72
PDLIM7-202ENST00000355841 TLL1O43897 1013 aa19.57■□□□□ 0.72
PDLIM7-202ENST00000355841 ZNF623O75123 536 aa19.57■□□□□ 0.72
PDLIM7-202ENST00000355841 PIGRP01833 764 aa19.57■□□□□ 0.72
PDLIM7-202ENST00000355841 STAG3L1P0CL83 205 aa19.57■□□□□ 0.72
PDLIM7-202ENST00000355841 ABCD1P33897 745 aa19.57■□□□□ 0.72
PDLIM7-202ENST00000355841 PAN2Q504Q3 1202 aaKnown RBP19.57■□□□□ 0.72
PDLIM7-202ENST00000355841 AGMOQ6ZNB7 445 aa19.57■□□□□ 0.72
PDLIM7-202ENST00000355841 YME1L1Q96TA2 773 aa19.57■□□□□ 0.72
PDLIM7-202ENST00000355841 EXOC7Q9UPT5 735 aa19.57■□□□□ 0.72
PDLIM7-202ENST00000355841 LCHNA4D1U4 455 aa19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 DGKIO75912 1065 aa19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 MBD3O95983 291 aa19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 ADSSP30520 456 aa19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 AFF1P51825 1210 aaKnown RBP19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 NOLC1Q14978 699 aaKnown RBP eCLIP19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 CLLU1OSQ5K130 101 aa19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 FAM43BQ6ZT52 329 aaPredicted RBP19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 MRPL10Q7Z7H8 261 aaKnown RBP19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 TMEM192Q8IY95 271 aa19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 THNSL1Q8IYQ7 743 aa19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 PBX4Q9BYU1 374 aa19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 ELAC1Q9H777 363 aaKnown RBP19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 TMEM206Q9H813 350 aa19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 RMND1Q9NWS8 449 aa19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 SNTG2Q9NY99 539 aa19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 KLK14Q9P0G3 267 aa19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 KIAA1468Q9P260 1216 aa19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 A0A1W2PPC1 479 aa19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 EOMESO95936 686 aa19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 SKIP12755 728 aa19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 ITGA4P13612 1032 aa19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 MCL1Q07820 350 aa19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 DCAF4L1Q3SXM0 396 aa19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 ZBTB41Q5SVQ8 909 aa19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 HELQQ8TDG4 1101 aa19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 CXCL16Q9H2A7 254 aa19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 PARP2Q9UGN5 583 aa19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 INPP5FQ9Y2H2 1132 aa19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 YBX2Q9Y2T7 364 aaKnown RBP19.56■□□□□ 0.72
PDLIM7-202ENST00000355841 TGFB1I1O43294 461 aa19.55■□□□□ 0.72
PDLIM7-202ENST00000355841 MCF2P10911 925 aa19.55■□□□□ 0.72
PDLIM7-202ENST00000355841 BMP6P22004 513 aa19.55■□□□□ 0.72
PDLIM7-202ENST00000355841 BMT2Q1RMZ1 405 aa19.55■□□□□ 0.72
PDLIM7-202ENST00000355841 ZNF658Q5TYW1 1059 aaPredicted RBP19.55■□□□□ 0.72
PDLIM7-202ENST00000355841 ZSWIM2Q8NEG5 633 aa19.55■□□□□ 0.72
PDLIM7-202ENST00000355841 POMGNT1Q8WZA1 660 aa19.55■□□□□ 0.72
PDLIM7-202ENST00000355841 ZFP42Q96MM3 310 aa19.55■□□□□ 0.72
PDLIM7-202ENST00000355841 RAD9AQ99638 391 aa19.55■□□□□ 0.72
PDLIM7-202ENST00000355841 CBWD1Q9BRT8 395 aa19.55■□□□□ 0.72
PDLIM7-202ENST00000355841 MSTO1Q9BUK6 570 aa19.55■□□□□ 0.72
PDLIM7-202ENST00000355841 PCIF1Q9H4Z3 704 aa19.55■□□□□ 0.72
PDLIM7-202ENST00000355841 HCSTQ9UBK5 93 aa19.55■□□□□ 0.72
PDLIM7-202ENST00000355841 A0A0B4J269 797 aa19.54■□□□□ 0.72
PDLIM7-202ENST00000355841 TBKBP1A7MCY6 615 aa19.54■□□□□ 0.72
PDLIM7-202ENST00000355841 SOX1O00570 391 aaPredicted RBP19.54■□□□□ 0.72
PDLIM7-202ENST00000355841 ARHGEF15O94989 841 aa19.54■□□□□ 0.72
PDLIM7-202ENST00000355841 HTRA4P83105 476 aaPredicted RBP19.54■□□□□ 0.72
PDLIM7-202ENST00000355841 KNOP1Q1ED39 458 aaKnown RBP19.54■□□□□ 0.72
PDLIM7-202ENST00000355841 LRIT3Q3SXY7 679 aa19.54■□□□□ 0.72
PDLIM7-202ENST00000355841 ZNF689Q96CS4 500 aaPredicted RBP19.54■□□□□ 0.72
PDLIM7-202ENST00000355841 PGBD4Q96DM1 585 aa19.54■□□□□ 0.72
PDLIM7-202ENST00000355841 GBP3Q9H0R5 595 aa19.54■□□□□ 0.72
PDLIM7-202ENST00000355841 RC3H2Q9HBD1 1191 aaKnown RBP19.54■□□□□ 0.72
PDLIM7-202ENST00000355841 CHD9Q3L8U1 2897 aa19.54■□□□□ 0.72
PDLIM7-202ENST00000355841 SZT2Q5T011 3432 aa19.54■□□□□ 0.72
PDLIM7-202ENST00000355841 CLIC2O15247 247 aa19.53■□□□□ 0.72
PDLIM7-202ENST00000355841 RECQL4O94761 1208 aa19.53■□□□□ 0.72
PDLIM7-202ENST00000355841 CA3P07451 260 aa19.53■□□□□ 0.72
PDLIM7-202ENST00000355841 MLH1P40692 756 aa19.53■□□□□ 0.72
PDLIM7-202ENST00000355841 TNFSF9P41273 254 aa19.53■□□□□ 0.72
PDLIM7-202ENST00000355841 PRCPP42785 496 aa19.53■□□□□ 0.72
PDLIM7-202ENST00000355841 SPRED2Q7Z698 418 aa19.53■□□□□ 0.72
PDLIM7-202ENST00000355841 ABI1Q8IZP0 508 aa19.53■□□□□ 0.72
PDLIM7-202ENST00000355841 NOC3LQ8WTT2 800 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-202ENST00000355841 SAAL1Q96ER3 474 aa19.53■□□□□ 0.72
PDLIM7-202ENST00000355841 CASD1Q96PB1 797 aa19.53■□□□□ 0.72
PDLIM7-202ENST00000355841 GAD1Q99259 594 aa19.53■□□□□ 0.72
PDLIM7-202ENST00000355841 RSAD1Q9HA92 442 aa19.53■□□□□ 0.72
PDLIM7-202ENST00000355841 INSL6Q9Y581 213 aa19.53■□□□□ 0.72
PDLIM7-202ENST00000355841 STYXL1Q9Y6J8 313 aa19.53■□□□□ 0.72
PDLIM7-202ENST00000355841 CDH23Q9H251 3354 aa19.53■□□□□ 0.72
PDLIM7-202ENST00000355841 UBE4BO95155 1302 aa19.53■□□□□ 0.72
PDLIM7-202ENST00000355841 COL4A6Q14031 1691 aa19.53■□□□□ 0.72
PDLIM7-202ENST00000355841 FAM189A1O60320 539 aa19.52■□□□□ 0.72
PDLIM7-202ENST00000355841 OFD1O75665 1012 aa19.52■□□□□ 0.72
PDLIM7-202ENST00000355841 ACOT2P49753 483 aa19.52■□□□□ 0.72
PDLIM7-202ENST00000355841 MORC3Q14149 939 aa19.52■□□□□ 0.72
PDLIM7-202ENST00000355841 GLB1LQ6UWU2 654 aa19.52■□□□□ 0.72
PDLIM7-202ENST00000355841 APBB1IPQ7Z5R6 666 aaPredicted RBP19.52■□□□□ 0.72
PDLIM7-202ENST00000355841 NKX2-4Q9H2Z4 354 aa19.52■□□□□ 0.72
PDLIM7-202ENST00000355841 KCTD10Q9H3F6 313 aa19.52■□□□□ 0.72
PDLIM7-202ENST00000355841 AGPAT3Q9NRZ7 376 aa19.52■□□□□ 0.72
PDLIM7-202ENST00000355841 TMEM63CQ9P1W3 806 aa19.52■□□□□ 0.72
PDLIM7-202ENST00000355841 AGO2Q9UKV8 859 aaKnown RBP19.52■□□□□ 0.72
PDLIM7-202ENST00000355841 CHD7Q9P2D1 2997 aa19.52■□□□□ 0.72
PDLIM7-202ENST00000355841 GOLGA8IPA6NC78 632 aa19.52■□□□□ 0.71
PDLIM7-202ENST00000355841 ARL5CA6NH57 179 aa19.52■□□□□ 0.71
PDLIM7-202ENST00000355841 GOLGA8JA6NMD2 632 aa19.52■□□□□ 0.71
PDLIM7-202ENST00000355841 MEFVO15553 781 aaPredicted RBP19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms