RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 AHDC1Q5TGY3 1603 aaPredicted RBP20.22■□□□□ 0.83
PRPF39-201ENST00000355765 SMAPO00193 183 aa20.22■□□□□ 0.83
PRPF39-201ENST00000355765 FTLP02792 175 aaPredicted RBP20.22■□□□□ 0.83
PRPF39-201ENST00000355765 TMED2Q15363 201 aa20.22■□□□□ 0.83
PRPF39-201ENST00000355765 CCDC6Q16204 474 aa20.22■□□□□ 0.83
PRPF39-201ENST00000355765 HYIQ5T013 277 aa20.22■□□□□ 0.83
PRPF39-201ENST00000355765 RNF207Q6ZRF8 634 aa20.22■□□□□ 0.83
PRPF39-201ENST00000355765 CYFIP1Q7L576 1253 aa20.22■□□□□ 0.83
PRPF39-201ENST00000355765 SLC13A5Q86YT5 568 aaPredicted RBP20.22■□□□□ 0.83
PRPF39-201ENST00000355765 ENDOVQ8N8Q3 282 aaKnown RBP20.22■□□□□ 0.83
PRPF39-201ENST00000355765 B4GALNT2Q8NHY0 566 aa20.22■□□□□ 0.83
PRPF39-201ENST00000355765 METTL14Q9HCE5 456 aaKnown RBP20.22■□□□□ 0.83
PRPF39-201ENST00000355765 PHTF1Q9UMS5 762 aa20.22■□□□□ 0.83
PRPF39-201ENST00000355765 PDXKO00764 312 aa20.21■□□□□ 0.83
PRPF39-201ENST00000355765 TTC4O95801 387 aa20.21■□□□□ 0.83
PRPF39-201ENST00000355765 KHDC1Q4VXA5 237 aaKnown RBP20.21■□□□□ 0.83
PRPF39-201ENST00000355765 OR52E8Q6IFG1 317 aa20.21■□□□□ 0.83
PRPF39-201ENST00000355765 RBBP8NLQ8NC74 664 aaPredicted RBP20.21■□□□□ 0.83
PRPF39-201ENST00000355765 EZH1Q92800 747 aaPredicted RBP20.21■□□□□ 0.83
PRPF39-201ENST00000355765 RUSC1Q9BVN2 902 aa20.21■□□□□ 0.83
PRPF39-201ENST00000355765 MTUS1Q9ULD2 1270 aa20.21■□□□□ 0.83
PRPF39-201ENST00000355765 CBWD6Q4V339 395 aa20.21■□□□□ 0.83
PRPF39-201ENST00000355765 CBWD3Q5JTY5 395 aa20.21■□□□□ 0.83
PRPF39-201ENST00000355765 CBWD5Q5RIA9 395 aa20.21■□□□□ 0.83
PRPF39-201ENST00000355765 EPM2AIP1Q7L775 607 aaPredicted RBP20.21■□□□□ 0.83
PRPF39-201ENST00000355765 LRRC8CQ8TDW0 803 aa20.21■□□□□ 0.83
PRPF39-201ENST00000355765 RIOX1Q9H6W3 641 aa20.21■□□□□ 0.83
PRPF39-201ENST00000355765 DNAJC18Q9H819 358 aa20.21■□□□□ 0.83
PRPF39-201ENST00000355765 COL16A1Q07092 1604 aaPredicted RBP20.21■□□□□ 0.83
PRPF39-201ENST00000355765 MIF4GDA9UHW6 222 aaKnown RBP20.2■□□□□ 0.83
PRPF39-201ENST00000355765 UBAP1LF5GYI3 381 aa20.2■□□□□ 0.83
PRPF39-201ENST00000355765 ABLIM1O14639 778 aa20.2■□□□□ 0.83
PRPF39-201ENST00000355765 MAPK13O15264 365 aa20.2■□□□□ 0.83
PRPF39-201ENST00000355765 SSR1P43307 286 aaKnown RBP20.2■□□□□ 0.83
PRPF39-201ENST00000355765 IL9RQ01113 521 aa20.2■□□□□ 0.83
PRPF39-201ENST00000355765 CLUL1Q15846 466 aa20.2■□□□□ 0.83
PRPF39-201ENST00000355765 TBC1D25Q3MII6 688 aa20.2■□□□□ 0.83
PRPF39-201ENST00000355765 FAM186BQ8IYM0 893 aa20.2■□□□□ 0.83
PRPF39-201ENST00000355765 ATG4AQ8WYN0 398 aa20.2■□□□□ 0.83
PRPF39-201ENST00000355765 FAM136AQ96C01 138 aa20.2■□□□□ 0.83
PRPF39-201ENST00000355765 ZNF333Q96JL9 665 aa20.2■□□□□ 0.83
PRPF39-201ENST00000355765 GORASP1Q9BQQ3 440 aa20.2■□□□□ 0.83
PRPF39-201ENST00000355765 VCXQ9H320 206 aa20.2■□□□□ 0.83
PRPF39-201ENST00000355765 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.2■□□□□ 0.83
PRPF39-201ENST00000355765 TYW1Q9NV66 732 aaKnown RBP20.2■□□□□ 0.83
PRPF39-201ENST00000355765 PCMTD2Q9NV79 361 aa20.2■□□□□ 0.83
PRPF39-201ENST00000355765 USH1CQ9Y6N9 552 aa20.2■□□□□ 0.83
PRPF39-201ENST00000355765 A0A1W2PRG0 241 aa20.2■□□□□ 0.82
PRPF39-201ENST00000355765 TULP1O00294 542 aaPredicted RBP20.2■□□□□ 0.82
PRPF39-201ENST00000355765 FOXN3O00409 490 aaPredicted RBP20.2■□□□□ 0.82
PRPF39-201ENST00000355765 CLDN3O15551 220 aa20.2■□□□□ 0.82
PRPF39-201ENST00000355765 TOM1O60784 492 aa20.2■□□□□ 0.82
PRPF39-201ENST00000355765 SIX1Q15475 284 aaPredicted RBP20.2■□□□□ 0.82
PRPF39-201ENST00000355765 INTS5Q6P9B9 1019 aaKnown RBP20.2■□□□□ 0.82
PRPF39-201ENST00000355765 ZC3H18Q86VM9 953 aaKnown RBP20.2■□□□□ 0.82
PRPF39-201ENST00000355765 GRAMD1AQ96CP6 724 aa20.2■□□□□ 0.82
PRPF39-201ENST00000355765 C9orf72Q96LT7 481 aa20.2■□□□□ 0.82
PRPF39-201ENST00000355765 NINJ2Q9NZG7 142 aa20.2■□□□□ 0.82
PRPF39-201ENST00000355765 RGL1Q9NZL6 768 aa20.2■□□□□ 0.82
PRPF39-201ENST00000355765 SNED1Q8TER0 1413 aa20.2■□□□□ 0.82
PRPF39-201ENST00000355765 RASA4BC9J798 803 aa20.2■□□□□ 0.82
PRPF39-201ENST00000355765 RASA4O43374 803 aa20.2■□□□□ 0.82
PRPF39-201ENST00000355765 SPOPO43791 374 aa20.2■□□□□ 0.82
PRPF39-201ENST00000355765 PPP1R11O60927 126 aaPredicted RBP20.2■□□□□ 0.82
PRPF39-201ENST00000355765 ATP5HO75947 161 aa20.2■□□□□ 0.82
PRPF39-201ENST00000355765 RPL13P26373 211 aaKnown RBP20.2■□□□□ 0.82
PRPF39-201ENST00000355765 RANBP1P43487 201 aa20.2■□□□□ 0.82
PRPF39-201ENST00000355765 RBM5P52756 815 aaKnown RBP eCLIP20.2■□□□□ 0.82
PRPF39-201ENST00000355765 ITGA8P53708 1063 aa20.2■□□□□ 0.82
PRPF39-201ENST00000355765 COG2Q14746 738 aa20.2■□□□□ 0.82
PRPF39-201ENST00000355765 KIAA0825Q8IV33 1275 aa20.2■□□□□ 0.82
PRPF39-201ENST00000355765 RHOT2Q8IXI1 618 aa20.2■□□□□ 0.82
PRPF39-201ENST00000355765 DRAXINQ8NBI3 349 aaPredicted RBP20.2■□□□□ 0.82
PRPF39-201ENST00000355765 FGD4Q96M96 766 aa20.2■□□□□ 0.82
PRPF39-201ENST00000355765 ADAM33Q9BZ11 813 aa20.2■□□□□ 0.82
PRPF39-201ENST00000355765 ATP9AO75110 1047 aa20.19■□□□□ 0.82
PRPF39-201ENST00000355765 YARSP54577 528 aaKnown RBP20.19■□□□□ 0.82
PRPF39-201ENST00000355765 TAF1BQ53T94 588 aaPredicted RBP20.19■□□□□ 0.82
PRPF39-201ENST00000355765 TMEM63BQ5T3F8 832 aa20.19■□□□□ 0.82
PRPF39-201ENST00000355765 BICDL1Q6ZP65 573 aa20.19■□□□□ 0.82
PRPF39-201ENST00000355765 INPP5DQ92835 1189 aa20.19■□□□□ 0.82
PRPF39-201ENST00000355765 SCOCQ9UIL1 159 aa20.19■□□□□ 0.82
PRPF39-201ENST00000355765 COL14A1Q05707 1796 aaKnown RBP20.19■□□□□ 0.82
PRPF39-201ENST00000355765 FMO5P49326 533 aa20.19■□□□□ 0.82
PRPF39-201ENST00000355765 RCN1Q15293 331 aa20.19■□□□□ 0.82
PRPF39-201ENST00000355765 ZC2HC1CQ53FD0 456 aaPredicted RBP20.19■□□□□ 0.82
PRPF39-201ENST00000355765 SLC51AQ86UW1 340 aa20.19■□□□□ 0.82
PRPF39-201ENST00000355765 CATSPER3Q86XQ3 398 aa20.19■□□□□ 0.82
PRPF39-201ENST00000355765 ZFAND2BQ8WV99 257 aa20.19■□□□□ 0.82
PRPF39-201ENST00000355765 AGPAT1Q99943 283 aa20.19■□□□□ 0.82
PRPF39-201ENST00000355765 ROBO3Q96MS0 1386 aa20.19■□□□□ 0.82
PRPF39-201ENST00000355765 PHLPP1O60346 1717 aa20.19■□□□□ 0.82
PRPF39-201ENST00000355765 FAM196BA6NMK8 535 aa20.18■□□□□ 0.82
PRPF39-201ENST00000355765 POLD1P28340 1107 aa20.18■□□□□ 0.82
PRPF39-201ENST00000355765 CRKLP46109 303 aaKnown RBP20.18■□□□□ 0.82
PRPF39-201ENST00000355765 CYP4A11Q02928 519 aa20.18■□□□□ 0.82
PRPF39-201ENST00000355765 WASHC2DQ5SRD0 308 aa20.18■□□□□ 0.82
PRPF39-201ENST00000355765 IRGCQ6NXR0 463 aa20.18■□□□□ 0.82
PRPF39-201ENST00000355765 CCNJLQ8IV13 435 aa20.18■□□□□ 0.82
PRPF39-201ENST00000355765 NEDD1Q8NHV4 660 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms