RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 TMEM175Q9BSA9 504 aa18.49■□□□□ 0.55
PDLIM7-201ENST00000355572 PRMT7Q9NVM4 692 aaPredicted RBP18.49■□□□□ 0.55
PDLIM7-201ENST00000355572 SNTG2Q9NY99 539 aa18.49■□□□□ 0.55
PDLIM7-201ENST00000355572 TECTAO75443 2155 aa18.49■□□□□ 0.55
PDLIM7-201ENST00000355572 VWA3AA6NCI4 1184 aa18.48■□□□□ 0.55
PDLIM7-201ENST00000355572 SFI1A8K8P3 1242 aa18.48■□□□□ 0.55
PDLIM7-201ENST00000355572 LOC730098B7Z3J9 87 aa18.48■□□□□ 0.55
PDLIM7-201ENST00000355572 H3BQV1 296 aa18.48■□□□□ 0.55
PDLIM7-201ENST00000355572 HIP1RO75146 1068 aa18.48■□□□□ 0.55
PDLIM7-201ENST00000355572 OR1G1P47890 313 aa18.48■□□□□ 0.55
PDLIM7-201ENST00000355572 NAB2Q15742 525 aa18.48■□□□□ 0.55
PDLIM7-201ENST00000355572 HYIQ5T013 277 aa18.48■□□□□ 0.55
PDLIM7-201ENST00000355572 LARP1BQ659C4 914 aaKnown RBP18.48■□□□□ 0.55
PDLIM7-201ENST00000355572 PARP2Q9UGN5 583 aa18.48■□□□□ 0.55
PDLIM7-201ENST00000355572 MUTYHQ9UIF7 546 aa18.48■□□□□ 0.55
PDLIM7-201ENST00000355572 FAN1Q9Y2M0 1017 aa18.48■□□□□ 0.55
PDLIM7-201ENST00000355572 GIT1Q9Y2X7 761 aa18.48■□□□□ 0.55
PDLIM7-201ENST00000355572 IRAK3Q9Y616 596 aa18.48■□□□□ 0.55
PDLIM7-201ENST00000355572 NPHP3-ACAD11A0A0J9YXS1 232 aa18.47■□□□□ 0.55
PDLIM7-201ENST00000355572 LAD1O00515 517 aa18.47■□□□□ 0.55
PDLIM7-201ENST00000355572 ACKR2O00590 384 aa18.47■□□□□ 0.55
PDLIM7-201ENST00000355572 SP100P23497 879 aaPredicted RBP18.47■□□□□ 0.55
PDLIM7-201ENST00000355572 MCM2P49736 904 aa18.47■□□□□ 0.55
PDLIM7-201ENST00000355572 RAD51AP2Q09MP3 1159 aa18.47■□□□□ 0.55
PDLIM7-201ENST00000355572 ZRSR1Q15695 479 aaKnown RBP18.47■□□□□ 0.55
PDLIM7-201ENST00000355572 FAM173BQ6P4H8 233 aa18.47■□□□□ 0.55
PDLIM7-201ENST00000355572 RNF135Q8IUD6 432 aa18.47■□□□□ 0.55
PDLIM7-201ENST00000355572 ZBTB8OSQ8IWT0 167 aa18.47■□□□□ 0.55
PDLIM7-201ENST00000355572 CEP120Q8N960 986 aa18.47■□□□□ 0.55
PDLIM7-201ENST00000355572 DEPTORQ8TB45 409 aa18.47■□□□□ 0.55
PDLIM7-201ENST00000355572 RSPH1Q8WYR4 309 aa18.47■□□□□ 0.55
PDLIM7-201ENST00000355572 PRIMPOLQ96LW4 560 aa18.47■□□□□ 0.55
PDLIM7-201ENST00000355572 KLHL5Q96PQ7 755 aa18.47■□□□□ 0.55
PDLIM7-201ENST00000355572 TRIM6Q9C030 488 aaPredicted RBP18.47■□□□□ 0.55
PDLIM7-201ENST00000355572 FAM50BQ9Y247 325 aa18.47■□□□□ 0.55
PDLIM7-201ENST00000355572 C2CD2LO14523 706 aa18.46■□□□□ 0.55
PDLIM7-201ENST00000355572 MEFVO15553 781 aaPredicted RBP18.46■□□□□ 0.55
PDLIM7-201ENST00000355572 RECQL4O94761 1208 aa18.46■□□□□ 0.55
PDLIM7-201ENST00000355572 ALDH2P05091 517 aa18.46■□□□□ 0.55
PDLIM7-201ENST00000355572 CNPP09543 421 aaKnown RBP18.46■□□□□ 0.55
PDLIM7-201ENST00000355572 NPTX2P47972 431 aa18.46■□□□□ 0.55
PDLIM7-201ENST00000355572 PEX3P56589 373 aa18.46■□□□□ 0.55
PDLIM7-201ENST00000355572 CACNB1Q02641 598 aaPredicted RBP18.46■□□□□ 0.55
PDLIM7-201ENST00000355572 PRPF4BQ13523 1007 aaKnown RBP18.46■□□□□ 0.55
PDLIM7-201ENST00000355572 TMEM119Q4V9L6 283 aa18.46■□□□□ 0.55
PDLIM7-201ENST00000355572 KRT79Q5XKE5 535 aa18.46■□□□□ 0.55
PDLIM7-201ENST00000355572 TMEM130Q8N3G9 435 aa18.46■□□□□ 0.55
PDLIM7-201ENST00000355572 RPGRIP1Q96KN7 1286 aa18.46■□□□□ 0.55
PDLIM7-201ENST00000355572 FAM193BQ96PV7 902 aaPredicted RBP18.46■□□□□ 0.55
PDLIM7-201ENST00000355572 HERC2P3Q9BVR0 1158 aa18.46■□□□□ 0.55
PDLIM7-201ENST00000355572 C1QTNF1Q9BXJ1 281 aa18.46■□□□□ 0.55
PDLIM7-201ENST00000355572 GPR62Q9BZJ7 368 aa18.46■□□□□ 0.55
PDLIM7-201ENST00000355572 POMKQ9H5K3 350 aa18.46■□□□□ 0.55
PDLIM7-201ENST00000355572 KANSL3Q9P2N6 904 aa18.46■□□□□ 0.55
PDLIM7-201ENST00000355572 KIF3AQ9Y496 699 aa18.46■□□□□ 0.55
PDLIM7-201ENST00000355572 ABLIM1O14639 778 aa18.45■□□□□ 0.54
PDLIM7-201ENST00000355572 GPR37L1O60883 481 aa18.45■□□□□ 0.54
PDLIM7-201ENST00000355572 MYBP10242 640 aa18.45■□□□□ 0.54
PDLIM7-201ENST00000355572 CBX2Q14781 532 aaPredicted RBP18.45■□□□□ 0.54
PDLIM7-201ENST00000355572 MAPK6Q16659 721 aa18.45■□□□□ 0.54
PDLIM7-201ENST00000355572 PHF7Q9BWX1 381 aaPredicted RBP18.45■□□□□ 0.54
PDLIM7-201ENST00000355572 C2orf40Q9H1Z8 148 aa18.45■□□□□ 0.54
PDLIM7-201ENST00000355572 UBN1Q9NPG3 1134 aa18.45■□□□□ 0.54
PDLIM7-201ENST00000355572 FOXD4L1Q9NU39 408 aa18.45■□□□□ 0.54
PDLIM7-201ENST00000355572 DNM3Q9UQ16 869 aa18.45■□□□□ 0.54
PDLIM7-201ENST00000355572 ANK1P16157 1881 aa18.44■□□□□ 0.54
PDLIM7-201ENST00000355572 CASTOR2A6NHX0 329 aa18.44■□□□□ 0.54
PDLIM7-201ENST00000355572 N4BP3O15049 544 aa18.44■□□□□ 0.54
PDLIM7-201ENST00000355572 DCXO43602 365 aa18.44■□□□□ 0.54
PDLIM7-201ENST00000355572 SOD2P04179 222 aa18.44■□□□□ 0.54
PDLIM7-201ENST00000355572 CLCN4P51793 760 aa18.44■□□□□ 0.54
PDLIM7-201ENST00000355572 SLC12A3P55017 1021 aa18.44■□□□□ 0.54
PDLIM7-201ENST00000355572 NCBP1Q09161 790 aaKnown RBP18.44■□□□□ 0.54
PDLIM7-201ENST00000355572 GRIK3Q13003 919 aa18.44■□□□□ 0.54
PDLIM7-201ENST00000355572 ARSHQ5FYA8 562 aa18.44■□□□□ 0.54
PDLIM7-201ENST00000355572 TMEM31Q5JXX7 168 aa18.44■□□□□ 0.54
PDLIM7-201ENST00000355572 RARS2Q5T160 578 aaKnown RBP18.44■□□□□ 0.54
PDLIM7-201ENST00000355572 KIAA0319Q5VV43 1072 aa18.44■□□□□ 0.54
PDLIM7-201ENST00000355572 USP49Q70CQ1 688 aa18.44■□□□□ 0.54
PDLIM7-201ENST00000355572 HASPINQ8TF76 798 aa18.44■□□□□ 0.54
PDLIM7-201ENST00000355572 KIFAP3Q92845 792 aa18.44■□□□□ 0.54
PDLIM7-201ENST00000355572 CASP10Q92851 521 aa18.44■□□□□ 0.54
PDLIM7-201ENST00000355572 ARHGAP28Q9P2N2 729 aa18.44■□□□□ 0.54
PDLIM7-201ENST00000355572 GDAQ9Y2T3 454 aa18.44■□□□□ 0.54
PDLIM7-201ENST00000355572 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.44■□□□□ 0.54
PDLIM7-201ENST00000355572 KMT2EQ8IZD2 1858 aa18.43■□□□□ 0.54
PDLIM7-201ENST00000355572 VPS37CA5D8V6 355 aaPredicted RBP18.43■□□□□ 0.54
PDLIM7-201ENST00000355572 SLC16A4O15374 487 aa18.43■□□□□ 0.54
PDLIM7-201ENST00000355572 RESTQ13127 1097 aa18.43■□□□□ 0.54
PDLIM7-201ENST00000355572 PPP2R5AQ15172 486 aa18.43■□□□□ 0.54
PDLIM7-201ENST00000355572 PTPAQ15257 358 aa18.43■□□□□ 0.54
PDLIM7-201ENST00000355572 SF3A1Q15459 793 aaKnown RBP18.43■□□□□ 0.54
PDLIM7-201ENST00000355572 GLRA4Q5JXX5 417 aa18.43■□□□□ 0.54
PDLIM7-201ENST00000355572 ATF7IP2Q5U623 682 aa18.43■□□□□ 0.54
PDLIM7-201ENST00000355572 FUT10Q6P4F1 479 aa18.43■□□□□ 0.54
PDLIM7-201ENST00000355572 SYT2Q8N9I0 419 aaPredicted RBP18.43■□□□□ 0.54
PDLIM7-201ENST00000355572 ZBTB45Q96K62 511 aaPredicted RBP18.43■□□□□ 0.54
PDLIM7-201ENST00000355572 TARS2Q9BW92 718 aaKnown RBP18.43■□□□□ 0.54
PDLIM7-201ENST00000355572 RAB34Q9BZG1 259 aa18.43■□□□□ 0.54
PDLIM7-201ENST00000355572 CDT1Q9H211 546 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms